Gene: BraSC138t45558Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraSC138t45558Z
- Transcript Identifier BraSC138t45558Z
- Gene Type Coding gene
- Location Brapa_scaffold_138 : 88842-89063 : negative
Gene Family Information
- ID HOM05D000580
- #Genes/#Species 959/83
- Phylogenetic origin
- ID ORTHO05D006815
- #Genes/#Species 138/44
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot A0A249RPJ2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009767 | ISO | PLAZA Homology (enrichment) | photosynthetic electron transport chain | HOM05D000580 |
| GO:0009769 | ISO | PLAZA Integrative Orthology | photosynthesis, light harvesting in photosystem II | ATCG00710 |
| GO:0050821 | IEA | GOA Database | protein stabilization | |
| GO:0050821 | IEA | InterPro | protein stabilization | |
| GO:0015979 | IEA | GOA Database | photosynthesis | |
| GO:0015979 | IEA | InterPro | photosynthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00710 |
| GO:0042301 | IEA | GOA Database | phosphate ion binding | |
| GO:0042301 | IEA | InterPro | phosphate ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009523 | IEA | GOA Database | photosystem II | |
| GO:0009523 | IEA | InterPro | photosystem II | |
| GO:0009654 | ISO | PLAZA Integrative Orthology | photosystem II oxygen evolving complex | ATCG00710 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00710 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009579 | IEA | GOA Database | thylakoid | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.2.3 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbH |