Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.0e-144 516.9 303 100.0
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.4e-141 505.8 301 98.0
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.7e-78 297.0 293 61.8
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 6.0e-76 288.5 275 63.3
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 1.2e-73 280.8 261 64.8
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 2.3e-72 276.6 295 60.3
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 6.4e-70 268.5 268 59.0
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 8.3e-70 268.1 253 63.6
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 4.1e-69 265.8 255 62.0
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 5.4e-69 265.4 256 59.8
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 3.5e-68 262.7 255 61.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.3e-67 260.8 267 57.3
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.7e-67 260.4 254 61.4
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 2.3e-67 260.0 253 61.7
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 6.6e-67 258.5 266 59.8
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.9e-66 256.9 284 54.9
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 3.3e-66 256.1 296 53.7
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.6e-65 253.8 268 64.9
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.1e-65 253.4 248 52.8
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 4.7e-65 252.3 281 50.2
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 6.2e-65 251.9 163 71.8
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.1e-64 251.1 330 51.2
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.4e-64 250.8 252 65.9
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.4e-64 250.0 253 64.0
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 3.4e-63 246.1 253 57.3
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 2.2e-62 243.4 254 52.8
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 2.4e-61 240.0 259 59.1
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 7.1e-61 238.4 252 54.4
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 9.2e-61 238.0 255 49.8
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 9.2e-61 238.0 284 53.9
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.2e-60 237.7 262 58.8
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 3.5e-60 236.1 257 62.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.5e-60 236.1 254 63.4
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 4.6e-60 235.7 257 62.3
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 7.8e-60 235.0 276 55.8
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 2.3e-59 233.4 267 50.6
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 3.0e-59 233.0 250 49.2
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.9e-59 232.6 264 59.5
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.9e-59 232.6 264 59.5
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 3.9e-59 232.6 278 48.9
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 6.6e-59 231.9 252 47.6
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 6.6e-59 231.9 249 63.9
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 8.7e-59 231.5 271 55.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 2.5e-58 229.9 255 61.2
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.2e-57 227.6 256 59.8
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 6.2e-57 225.3 251 59.4
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 1.4e-56 224.2 252 62.7
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.8e-56 223.8 301 48.8
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.4e-56 223.4 258 48.1
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 6.9e-56 221.9 276 57.2
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.4e-55 219.2 235 64.3
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 7.6e-55 218.4 245 58.8
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.7e-54 217.2 272 44.9
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 2.2e-54 216.9 283 43.1
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 2.9e-54 216.5 254 54.7
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.4e-53 214.2 265 44.2
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 3.2e-53 213.0 283 58.0
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 5.4e-53 212.2 237 62.0
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 5.4e-53 212.2 265 52.8
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.2e-52 211.1 260 55.0
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.6e-52 210.7 283 50.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.6e-52 210.7 275 51.3
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 4.6e-52 209.1 253 61.3
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.7e-51 207.2 195 66.7
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.3e-51 206.8 252 44.0
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 5.1e-51 205.7 191 63.4
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 8.7e-51 204.9 254 59.4
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.1e-50 204.5 252 45.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 5.6e-50 202.2 171 57.9
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 7.3e-50 201.8 304 40.5
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.1e-49 200.3 252 44.8
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.6e-49 199.5 252 42.9
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 6.2e-49 198.7 252 42.5
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 6.2e-49 198.7 252 42.5
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 6.2e-49 198.7 252 42.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 6.2e-49 198.7 275 46.5
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.1e-48 196.4 252 42.5
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 3.1e-48 196.4 264 54.2
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 3.1e-48 196.4 252 48.8
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 4.0e-48 196.1 252 42.1
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.2e-47 194.5 248 51.6
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.2e-47 194.5 252 57.9
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.5e-47 194.1 248 46.8
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 4.5e-47 192.6 143 63.6
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.5e-47 192.6 248 47.2
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.3e-46 191.0 182 55.5
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 8.4e-46 188.3 260 44.2
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.7e-44 183.3 282 41.1
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 2.7e-44 183.3 235 56.6
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 6.7e-43 178.7 157 55.4
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 4.3e-42 176.0 249 41.8
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.3e-42 176.0 260 45.8
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 4.8e-41 172.6 157 52.2
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 8.1e-41 171.8 279 38.0
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.1e-40 171.4 265 48.7
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 2.4e-40 170.2 186 48.4
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.1e-40 169.9 140 52.1
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 4.0e-40 169.5 143 56.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.4e-37 160.2 236 51.7
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.4e-37 160.2 236 51.7
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.2e-37 159.8 251 39.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 2.1e-36 157.1 244 46.3
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 6.0e-36 155.6 103 67.0
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 4.5e-31 139.4 236 53.8
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.7e-30 137.5 253 45.5
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 5.5e-29 132.5 250 40.0
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.3e-25 119.0 156 44.9
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 9.0e-24 115.2 148 59.5
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.7e-22 110.9 288 43.1
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.4e-21 107.8 102 51.0
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 7.9e-20 102.1 166 39.8
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 1.4e-19 101.3 97 52.6
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.8e-19 100.9 256 38.3
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.1e-18 98.2 132 57.6
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 9.7e-18 95.1 115 40.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.8e-16 90.9 146 34.9
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 3.4e-15 86.7 64 64.1
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 7.2e-13 79.0 63 58.7
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.7e-12 76.3 43 79.1
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 1.4e-08 64.7 60 56.7
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 2.2e-06 57.4 54 53.7


User provided reference genes

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