Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5524 Papaver somniferum HOM05D000276 ORTHO05D305491 5.6e-43 177.2 88 100.0
Aqoxy2G04019 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 6.1e-13 77.4 88 52.3
PSO017G4929 Papaver somniferum HOM05D000276 ORTHO05D003855 2.3e-12 75.5 88 51.1
TAR624G0525 Trochodendron aralioides HOM05D000276 ORTHO05D003855 3.0e-12 75.1 90 50.0
ClCG01G009520 Citrullus lanatus HOM05D000276 ORTHO05D003855 5.1e-12 74.3 88 52.3
MELO3C021745.2 Cucumis melo HOM05D000276 ORTHO05D003855 5.1e-12 74.3 88 52.3
Cc04_g13010 Coffea canephora HOM05D000276 ORTHO05D003855 6.7e-12 73.9 88 51.1
Sed0005548 Sechium edule HOM05D000276 ORTHO05D003855 6.7e-12 73.9 85 54.1
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 6.7e-12 73.9 85 54.1
GSVIVG01012066001 Vitis vinifera HOM05D000276 ORTHO05D003855 6.7e-12 73.9 88 51.1
MBI06_g27515_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D003855 8.8e-12 73.6 88 52.3
Os02g0634900 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 8.8e-12 73.6 92 51.1
Os03g0387100 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 8.8e-12 73.6 92 51.1
Thecc.06G143200 Theobroma cacao HOM05D000276 ORTHO05D003855 8.8e-12 73.6 88 51.1
TAR626G1559 Trochodendron aralioides HOM05D000276 ORTHO05D003855 8.8e-12 73.6 88 51.1
Nn4g24843 Nelumbo nucifera HOM05D000276 ORTHO05D003855 1.1e-11 73.2 92 51.1
PSO478G2087 Papaver somniferum HOM05D000276 ORTHO05D003855 1.1e-11 73.2 88 50.0
PSO675G3251 Papaver somniferum HOM05D000462 ORTHO05D003661 1.1e-11 73.2 84 54.8
PGSC0003DMG400020441 Solanum tuberosum HOM05D000276 ORTHO05D003855 1.1e-11 73.2 88 50.0
Eucgr.F04120 Eucalyptus grandis HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 51.1
Solyc07g055080.3 Solanum lycopersicum HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 50.0
Sopen07g027130 Solanum pennellii HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 50.0
PGSC0003DMG400010543 Solanum tuberosum HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 50.0
Zm00001eb185510 Zea mays HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 48.9
Zm00001eb185540 Zea mays HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 48.9
Zm00001eb248210 Zea mays HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 48.9
Zm00001eb248220 Zea mays HOM05D000276 ORTHO05D003855 1.5e-11 72.8 88 48.9
Ah.10g035160 Amaranthus hybridus HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 50.0
Duzib235G1056 Durio zibethinus HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gohir.A05G145700 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gohir.A10G044600 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gohir.D05G148100 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gohir.D10G045800 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gorai.009G152300 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Gorai.011G048700 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Pp3c11_10390 Physcomitrium patens HOM05D000276 ORTHO05D003855 2.0e-11 72.4 85 50.6
PGR102G3129 Punica granatum HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 51.1
Hund12476 Selenicereus undatus HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 50.0
Hund26663 Selenicereus undatus HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 50.0
Sc24g0002720 Simmondsia chinensis HOM05D000276 ORTHO05D003855 2.0e-11 72.4 88 50.0
MD05G1251300 Malus domestica HOM05D000276 ORTHO05D003855 2.5e-11 72.0 88 51.1
MD10G1231800 Malus domestica HOM05D000276 ORTHO05D003855 2.5e-11 72.0 88 51.1
PSO063G5488 Papaver somniferum HOM05D000276 ORTHO05D003855 2.5e-11 72.0 88 50.0
PSO782G0714 Papaver somniferum HOM05D000276 ORTHO05D003855 2.5e-11 72.0 88 50.0
CAN.G782.3 Capsicum annuum HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 50.0
CDE04G0605 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 3.3e-11 71.6 85 50.6
Nitab4.5_0009892g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 50.0
Peaxi162Scf00241g00079 Petunia axillaris HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 50.0
Pp3c7_18410 Physcomitrium patens HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 47.7
Solyc10g008010.4 Solanum lycopersicum HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 50.0
Sopen10g003880 Solanum pennellii HOM05D000276 ORTHO05D003855 3.3e-11 71.6 88 50.0
EL10Ac9g22468 Beta vulgaris HOM05D000276 ORTHO05D003855 4.3e-11 71.2 88 48.9
DCAR_013727 Daucus carota HOM05D000276 ORTHO05D003855 4.3e-11 71.2 88 50.0
Migut.H01673 Erythranthe guttata HOM05D000276 ORTHO05D003855 4.3e-11 71.2 88 50.0
Glyma.03G073300 Glycine max HOM05D000276 ORTHO05D003855 4.3e-11 71.2 88 50.0
Mapoly0004s0033 Marchantia polymorpha HOM05D000276 ORTHO05D003855 4.3e-11 71.2 92 50.0
CAN.G1736.4 Capsicum annuum HOM05D000276 ORTHO05D003855 5.7e-11 70.9 88 50.0
Prupe.4G112500 Prunus persica HOM05D000276 ORTHO05D003855 5.7e-11 70.9 88 50.0
CSS0029046 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
DCAR_016836 Daucus carota HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Dinv19593 Davidia involucrata HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Dinv42484 Davidia involucrata HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
ECA236G0294 Erigeron canadensis HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
HanXRQChr02g0037521 Helianthus annuus HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
HanXRQChr09g0245891 Helianthus annuus HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
HanXRQChr11g0335541 Helianthus annuus HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Lsat_1_v5_gn_7_110320 Lactuca sativa HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Lj1A1145T21 Lonicera japonica HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Lj5A344G22 Lonicera japonica HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Nitab4.5_0000822g0090 Nicotiana tabacum HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Nitab4.5_0001095g0050 Nicotiana tabacum HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Oeu027721.1 Olea europaea HOM05D001395 ORTHO05D003855 7.4e-11 70.5 88 50.0
Oeu043725.1 Olea europaea HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Peaxi162Scf00469g00315 Petunia axillaris HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Potri.012G123550 Populus trichocarpa HOM05D000276 ORTHO05D003855 7.4e-11 70.5 85 51.8
Potri.015G122400 Populus trichocarpa HOM05D000276 ORTHO05D003855 7.4e-11 70.5 85 51.8
TWI38G2183 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
TWI63G1717 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 7.4e-11 70.5 88 50.0
Actinidia08881 Actinidia chinensis HOM05D000276 ORTHO05D003855 9.7e-11 70.1 85 51.8
Ah.16g105330 Amaranthus hybridus HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 47.7
arahy.Tifrunner.gnm1.ann1.A3R4VN Arachis hypogaea HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
arahy.Tifrunner.gnm1.ann1.J6931G Arachis hypogaea HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
arahy.Tifrunner.gnm1.ann1.N85E68 Arachis hypogaea HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
arahy.Tifrunner.gnm1.ann1.X4HZ2T Arachis hypogaea HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
A07p44330 Brassica napus HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 48.9
Ca_22480_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Ca_30351_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Glyma.01G105500 Glycine max HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Glyma.08G167600 Glycine max HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Glyma.15G260000 Glycine max HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Lj1g0005035 Lotus japonicus HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Medtr0167s0060 Medicago truncatula HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
Psat1g013600 Pisum sativum HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
SGA_v2.0_scaffold239G44025 Striga asiatica HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 48.9
TPR.G33827 Trifolium pratense HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
VMungo0464G0273 Vigna mungo HOM05D000276 ORTHO05D003855 9.7e-11 70.1 88 50.0
BcaC08g47486 Brassica carinata HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 48.9
C06p53100 Brassica napus HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 48.9
BolC6t40327H Brassica oleracea HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 48.9
BraA07t30368Z Brassica rapa HOM05D000276 ORTHO05D003855 1.3e-10 69.7 87 49.4
Cpa.g.sc81.7 Carica papaya HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 50.0
Ciclev10005774m.g Citrus clementina HOM05D000276 ORTHO05D003855 1.3e-10 69.7 85 51.8
Lj3g0027077 Lotus japonicus HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 48.9
Manes.06G175300 Manihot esculenta HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 50.0
Manes.14G010700 Manihot esculenta HOM05D000276 ORTHO05D003855 1.3e-10 69.7 88 50.0
Sabra15G0138500 Salix brachista HOM05D000276 ORTHO05D003855 1.3e-10 69.7 92 50.0
AagrBONN_evm.TU.Sc2ySwM_117.328 Anthoceros agrestis HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 47.7
BcaB02g07205 Brassica carinata HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
BcaB02g08674 Brassica carinata HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
BcaB05g25179 Brassica carinata HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
BraA07t31941Z Brassica rapa HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
CiPaw.10G064400 Carya illinoinensis HOM05D000276 ORTHO05D003855 1.7e-10 69.3 85 51.8
AUR62041213 Chenopodium quinoa HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 47.7
AUR62042882 Chenopodium quinoa HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 47.7
Cc07_g05020 Coffea canephora HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
COL.COLO4_30995 Corchorus olitorius HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 48.9
HPP92_021539 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 47.7
HPP92_021548 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.7e-10 69.3 88 47.7
Aa31LG4G1800 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
AL1G28620 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
AL2G39680 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
AT1G16470 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
AT1G79210 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
MSTRG.13078 Avicennia marina HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
BcaC03g15875 Brassica carinata HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
BcaC08g45369 Brassica carinata HOM05D000276 ORTHO05D003855 2.2e-10 68.9 85 50.6
A02p22670 Brassica napus HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
A07p27240 Brassica napus HOM05D000276 ORTHO05D003855 2.2e-10 68.9 85 50.6
C02p36280 Brassica napus HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
C06p30010 Brassica napus HOM05D000276 ORTHO05D003855 2.2e-10 68.9 85 50.6
BolC2t09642H Brassica oleracea HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
BolC6t38161H Brassica oleracea HOM05D000276 ORTHO05D003855 2.2e-10 68.9 85 50.6
CSS0035611 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Carub.0001s1621 Capsella rubella HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Carub.0002s2608 Capsella rubella HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
CARHR016940 Cardamine hirsuta HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Cfa000708 Carpinus fangiana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 50.0
Migut.M01532 Erythranthe guttata HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 47.7
Thhalv10008648m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Thhalv10018943m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Hma1.2p1_1208F.1_g267120 Hydrangea macrophylla HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
SalBow8G5180 Salvia bowleyana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Sp1g14620 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Sp5g34260 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
SGA_v2.0_scaffold31G12584 Striga asiatica HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
THA.LOC104808130 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
THA.LOC104812363 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
unitig_578.g16332 Utricularia gibba HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
unitig_8.g4751 Utricularia gibba HOM05D000276 ORTHO05D003855 2.2e-10 68.9 88 48.9
Aa31LG7G1010 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.8e-10 68.6 85 50.6
MSTRG.14567 Avicennia marina HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
BraA02t07268Z Brassica rapa HOM05D000276 ORTHO05D003855 2.8e-10 68.6 85 50.6
CiPaw.09G076900 Carya illinoinensis HOM05D000276 ORTHO05D003855 2.8e-10 68.6 85 51.8
FvH4_3g12361 Fragaria vesca HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.8e-10 68.6 88 48.9
FAN25G2819 Fragaria x ananassa HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
MD05G1224600 Malus domestica HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
MD10G1206300 Malus domestica HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
RcHm_v2.0_Chr5g0020171 Rosa chinensis HOM05D000276 ORTHO05D003855 2.8e-10 68.6 88 48.9
CANSAT78G1531 Cannabis sativa HOM05D000276 ORTHO05D003855 4.8e-10 67.8 88 48.9
Phvul.005G059300 Phaseolus vulgaris HOM05D000276 ORTHO05D003855 6.3e-10 67.4 88 48.9
QL04p081873 Quercus lobata HOM05D000276 ORTHO05D003855 6.3e-10 67.4 88 48.9
Prupe.4G136000 Prunus persica HOM05D000276 ORTHO05D003855 8.2e-10 67.0 88 47.7
SMO203G0023 Selaginella moellendorffii HOM05D000276 ORTHO05D003855 8.2e-10 67.0 88 44.3
Aqoxy2G01703 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 1.1e-09 66.6 82 51.2
Lalb_Chr01g0015471 Lupinus albus HOM05D000276 ORTHO05D003855 1.8e-09 65.9 88 46.6
Lalb_Chr25g0284731 Lupinus albus HOM05D000276 ORTHO05D003855 1.8e-09 65.9 88 46.6
Cre08.g373250 Chlamydomonas reinhardtii HOM05D000276 ORTHO05D003855 2.4e-09 65.5 88 43.2
CDE07G0648 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 4.1e-09 64.7 50 58.0
vmacro16726 Vaccinium macrocarpon HOM05D000276 ORTHO05D003855 5.3e-09 64.3 100 47.0
HPP92_021535 Vanilla planifolia HOM05D000276 ORTHO05D003855 6.9e-09 63.9 41 73.2
Aqoxy3G04299 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 1.2e-08 63.2 85 49.4
CSS0017767 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 1.2e-08 63.2 82 48.8
Rhsim12G0175800 Rhododendron simsii HOM05D000276 ORTHO05D003855 2.6e-08 62.0 59 55.9
Zm00001eb248230 Zea mays HOM05D000276 ORTHO05D003855 3.4e-08 61.6 41 70.7
Actinidia36817 Actinidia chinensis HOM05D000276 ORTHO05D003855 5.9e-08 60.8 79 50.6
SEGI_13363 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 7.7e-08 60.5 41 70.7
Ca_03602_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 1.0e-07 60.1 41 70.7
Ca_27312_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 1.0e-07 60.1 41 70.7
CBR_g50356 Chara braunii HOM05D000276 ORTHO05D003855 1.7e-07 59.3 89 43.8
Sabra12G0084200 Salix brachista HOM05D000009 ORTHO05D000008 1.4e-06 56.2 59 52.5
MCO09G299 Micromonas commoda HOM05D000276 ORTHO05D003855 2.5e-06 55.5 41 63.4
Ah.11g040490 Amaranthus hybridus HOM05D000276 ORTHO05D003855 9.4e-06 53.5 78 42.3


User provided reference genes

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