Gene: Sopen10g003880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g003880
  • Transcript Identifier Sopen10g003880.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 2336655-2342010 : positive

Gene Family Information

  • ID HOM05D000276
  • #Genes/#Species 1584/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g003880.1

Descriptions

  • Description Encodes 20S proteasome subunit PAB1 (PAB1). | proteasome subunit PAB1 (PAB1) | FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity | INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site , Proteasome, subunit alpha/beta | BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT1G16470
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G79210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005839
IEA
InterProproteasome core complex
GO:0019773
IEA
InterProproteasome core complex, alpha-subunit complex
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G16470
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G79210
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT1G79210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001353 Proteasome, subunit alpha/beta
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR000426 Proteasome alpha-subunit, N-terminal domain
Mapman id Description
19.2.5.1.1.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-2