Gene: FAN21G0631
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN21G0631
- Transcript Identifier FAN21G0631.1
- Gene Type Coding gene
- Location Fvb3-2 : 6539383-6548472 : negative
Gene Family Information
- ID HOM05D006866
- #Genes/#Species 117/85
- Phylogenetic origin
- ID ORTHO05D008689
- #Genes/#Species 116/84
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb3-2-processed-gene-65.12.v1.0.a1
- pacid 50481537
Descriptions
- Description PF00227//PF01535//PF01597//PF10584//PF13041 - Proteasome subunit (Proteasome) // PPR repeat (PPR) // Glycine cleavage H-protein (GCV_H) // Proteasome subunit A N-terminal signature (Proteasome_A_N) // PPR repeat family (PPR_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0019464 | IEA | InterPro | glycine decarboxylation via glycine cleavage system | |
| GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
| GO:0010239 | ISO | PLAZA Integrative Orthology | chloroplast mRNA processing | AT2G35130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G35130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019773 | IEA | InterPro | proteasome core complex, alpha-subunit complex | |
| GO:0005960 | IEA | InterPro | glycine cleavage complex | |
| GO:0005839 | IEA | InterPro | proteasome core complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000426 | Proteasome alpha-subunit, N-terminal domain |
| IPR002885 | Pentatricopeptide repeat |
| IPR029055 | Nucleophile aminohydrolases, N-terminal |
| IPR017453 | Glycine cleavage system H-protein, subgroup |
| IPR033753 | Glycine cleavage system H-protein/Simiate |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR011053 | Single hybrid motif |
| IPR001353 | Proteasome, subunit alpha/beta |
| Mapman id | Description |
|---|---|
| 1.1.8.1.6.1 | Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and maintenance.ndhA-specific mRNA splicing factor |
| 1.3.4.4 | Photosynthesis.photorespiration.glycine decarboxylase complex.lipoamide-containing component H-protein |
| 19.2.5.1.1.2 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-2 |