Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 1.8e-81 307.0 343 100.0
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.2e-43 181.4 343 74.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.2e-43 181.4 336 81.0
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 4.4e-43 179.5 339 80.5
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.3e-42 177.9 324 71.0
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 3.2e-41 173.3 331 82.5
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 4.1e-41 172.9 323 83.9
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 7.1e-41 172.2 331 76.7
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 9.2e-41 171.8 340 76.2
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.2e-40 171.4 339 79.4
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 3.5e-40 169.9 336 81.5
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 6.0e-40 169.1 329 77.5
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 1.9e-38 164.1 324 79.9
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 5.6e-38 162.5 322 79.8
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 5.6e-38 162.5 336 78.0
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 7.3e-38 162.2 336 62.5
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 7.3e-38 162.2 341 77.1
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 7.3e-38 162.2 338 77.8
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.6e-37 161.0 313 84.7
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 2.1e-37 160.6 314 81.5
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 2.8e-37 160.2 324 79.3
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 4.7e-37 159.5 339 75.8
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 6.2e-37 159.1 341 77.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 6.2e-37 159.1 336 78.3
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 8.1e-37 158.7 339 78.5
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 1.8e-36 157.5 327 78.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.8e-36 157.5 339 74.9
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 2.3e-36 157.1 327 76.5
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 3.1e-36 156.8 332 77.4
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 3.1e-36 156.8 326 76.7
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 5.2e-36 156.0 329 78.7
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 5.2e-36 156.0 341 76.8
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 5.2e-36 156.0 316 80.7
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 6.8e-36 155.6 324 77.2
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 8.9e-36 155.2 335 77.9
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.5e-35 154.5 337 76.6
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 1.5e-35 154.5 324 76.9
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 2.0e-35 154.1 336 76.2
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 2.6e-35 153.7 338 72.8
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 3.4e-35 153.3 338 69.8
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 3.4e-35 153.3 328 77.1
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 4.4e-35 152.9 323 71.5
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 7.6e-35 152.1 326 79.4
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 7.6e-35 152.1 336 75.9
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.3e-34 151.4 327 77.7
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.3e-34 151.4 325 78.5
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.3e-34 151.4 319 78.1
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.2e-34 150.6 329 75.4
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-34 149.8 331 77.0
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-34 149.8 331 77.0
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 6.4e-34 149.1 338 71.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 6.4e-34 149.1 318 77.4
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 2.4e-33 147.1 319 80.9
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 3.2e-33 146.7 327 74.3
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 3.2e-33 146.7 326 77.6
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 7.1e-33 145.6 329 76.3
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 7.1e-33 145.6 329 76.3
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 7.1e-33 145.6 335 75.5
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.1e-32 144.1 327 76.5
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.1e-32 144.1 327 76.1
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.7e-32 143.7 336 74.1
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 3.5e-32 143.3 328 71.0
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 4.6e-32 142.9 327 74.9
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 6.0e-32 142.5 343 74.6
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.3e-31 141.4 343 74.3
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.3e-31 141.4 337 73.9
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 2.3e-31 140.6 317 77.3
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 3.9e-31 139.8 339 74.3
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 5.1e-31 139.4 337 73.6
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 8.6e-31 138.7 338 67.8
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 9.6e-30 135.2 86 75.6
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 4.7e-29 132.9 327 74.0
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 6.2e-29 132.5 370 62.4
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 3.1e-28 130.2 316 75.0
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 6.8e-28 129.0 327 65.4
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 6.8e-28 129.0 327 76.1
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 6.8e-28 129.0 339 73.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 8.9e-28 128.6 338 72.8
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.5e-27 127.9 339 42.8
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.6e-27 127.1 327 75.8
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 2.6e-27 127.1 322 77.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 1.3e-26 124.8 98 60.2
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.9e-26 123.6 300 80.3
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 2.4e-25 120.6 341 66.9
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 2.4e-25 120.6 341 66.9
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 5.4e-25 119.4 341 66.9
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 9.3e-25 118.6 324 62.7
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.2e-24 118.2 335 65.7
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.1e-24 117.5 324 63.0
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 2.1e-24 117.5 325 70.2
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.7e-24 117.1 324 60.8
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.5e-24 116.7 341 66.6
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.6e-24 116.3 323 62.8
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 6.0e-24 115.9 324 67.9
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.3e-23 114.8 85 62.4
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.7e-23 114.4 308 75.3
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.3e-23 114.0 323 61.3
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.5e-22 110.5 98 56.1
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 5.6e-22 109.4 94 56.4
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.3e-21 108.2 87 62.1
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 3.6e-21 106.7 329 50.5
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 3.1e-20 103.6 75 60.0
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 4.4e-19 99.8 331 58.0
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 9.9e-19 98.6 279 81.0
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.2e-17 93.2 59 72.9
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.5e-16 90.1 63 66.7
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 6.0e-16 89.4 279 79.2
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 8.7e-15 85.5 84 53.6
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 4.3e-14 83.2 58 67.2
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 3.1e-12 77.0 60 58.3
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 6.4e-10 69.3 61 52.5
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 2.4e-09 67.4 88 37.5
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 2.7e-08 63.9 84 40.5
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.9e-06 57.8 45 62.2
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.3e-06 56.6 41 65.9


User provided reference genes

Program Settings