Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G5192 Papaver somniferum HOM05D008740 ORTHO05D006738 8.5e-111 403.7 203 100.0
PSO675G4489 Papaver somniferum HOM05D008740 ORTHO05D006738 3.9e-79 298.5 203 73.9
PSO478G2639 Papaver somniferum HOM05D008740 ORTHO05D006738 4.3e-70 268.5 202 63.4
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 4.0e-68 261.9 202 65.3
PSO478G3009 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-67 258.8 202 59.4
PSO017G3608 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-66 256.5 202 61.4
PSO478G4901 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-66 256.5 202 58.9
PSO699G0051 Papaver somniferum HOM05D008740 ORTHO05D006738 3.7e-66 255.4 201 64.2
PSO478G1479 Papaver somniferum HOM05D008740 ORTHO05D006738 4.9e-66 255.0 202 64.9
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-65 253.1 202 62.9
PSO478G5133 Papaver somniferum HOM05D008740 ORTHO05D006738 3.2e-65 252.3 200 58.0
PSO339G1961 Papaver somniferum HOM05D008740 ORTHO05D006738 1.3e-63 246.9 202 61.9
PSO837G0046 Papaver somniferum HOM05D008740 ORTHO05D006738 2.3e-63 246.1 202 63.9
PSO591G0052 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-59 232.3 151 74.8
PSO675G0876 Papaver somniferum HOM05D008740 ORTHO05D006738 2.9e-58 229.2 202 57.4
PSO017G1969 Papaver somniferum HOM05D008740 ORTHO05D006738 9.0e-52 207.6 123 82.9
PSO063G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-50 203.8 202 53.0
PSO063G0655 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-50 203.4 205 55.1
PSO724G0332 Papaver somniferum HOM05D008740 ORTHO05D006738 4.9e-50 201.8 154 68.8
PSO170G3818 Papaver somniferum HOM05D008740 ORTHO05D006738 8.1e-45 184.5 145 62.1
PSO017G4275 Papaver somniferum HOM05D008740 ORTHO05D006738 1.4e-41 173.7 155 56.1
PSO541G3800 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-35 153.7 195 45.1
PSO017G7304 Papaver somniferum HOM05D000003 ORTHO05D000004 4.2e-33 145.6 199 38.7
PSO339G3265 Papaver somniferum HOM05D008740 ORTHO05D006738 2.5e-30 136.3 198 37.9
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 1.6e-29 133.7 97 70.1
PSO675G5251 Papaver somniferum HOM05D008740 ORTHO05D006738 4.1e-28 129.0 178 44.4
PSO170G6863 Papaver somniferum HOM05D008740 ORTHO05D006738 5.3e-28 128.6 120 53.3
PSO063G0429 Papaver somniferum HOM05D008740 ORTHO05D006738 2.6e-27 126.3 203 38.4
PSO478G1834 Papaver somniferum HOM05D008740 ORTHO05D006738 5.9e-27 125.2 198 35.9
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 6.5e-26 121.7 196 38.8
PSO357G0702 Papaver somniferum HOM05D008740 ORTHO05D006738 2.5e-25 119.8 195 36.9
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 4.2e-25 119.0 193 38.3
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-22 109.8 201 36.3
PSO478G2359 Papaver somniferum HOM05D007919 ORTHO05D006738 7.4e-22 108.2 199 36.2
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 8.2e-21 104.8 205 30.2
PSO782G5696 Papaver somniferum HOM05D008740 ORTHO05D006738 1.8e-20 103.6 184 37.0
PSO541G2695 Papaver somniferum HOM05D008740 ORTHO05D006738 5.3e-20 102.1 177 37.3
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-19 99.8 201 33.3
PSO732G0669 Papaver somniferum HOM05D008740 ORTHO05D006738 2.6e-19 99.8 195 34.9
PSO732G0569 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-19 99.4 195 34.9
PSO754G0011 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-19 99.4 152 38.8
PSO528G0097 Papaver somniferum HOM05D007919 ORTHO05D006738 5.9e-19 98.6 205 33.2
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-18 97.4 204 30.4
PSO170G5740 Papaver somniferum HOM05D008740 ORTHO05D006738 5.0e-18 95.5 165 35.8
PSO782G5603 Papaver somniferum HOM05D008740 ORTHO05D006738 5.0e-18 95.5 90 46.7
PSO478G3230 Papaver somniferum HOM05D008740 ORTHO05D006738 6.5e-18 95.1 152 37.5
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 8.5e-18 94.7 123 40.7
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-17 94.4 212 32.1
PSO541G3792 Papaver somniferum HOM05D007919 ORTHO05D006738 1.9e-17 93.6 201 31.3
PSO170G6506 Papaver somniferum HOM05D007919 ORTHO05D006738 5.5e-17 92.0 188 29.3
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 9.4e-17 91.3 203 30.5
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-16 90.5 201 29.9
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-16 90.1 200 29.0
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-16 89.7 134 39.6
PSO017G6133 Papaver somniferum HOM05D007919 ORTHO05D006738 6.1e-16 88.6 199 29.1
PSO170G1038 Papaver somniferum HOM05D007919 ORTHO05D006738 6.1e-16 88.6 199 31.2
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 6.1e-16 88.6 202 27.7
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 7.9e-16 88.2 206 29.6
PSO478G3405 Papaver somniferum HOM05D007919 ORTHO05D006738 7.9e-16 88.2 204 31.4
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 7.9e-16 88.2 199 30.7
PSO170G2360 Papaver somniferum HOM05D008740 ORTHO05D006738 1.0e-15 87.8 167 32.9
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-15 87.4 145 39.3
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-15 87.0 201 30.8
PSO384G0598 Papaver somniferum HOM05D008740 ORTHO05D006738 1.8e-15 87.0 151 37.7
PSO478G3403 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-15 86.3 138 39.9
PSO339G4796 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-15 84.7 204 31.9
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-15 84.7 200 29.5
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-15 84.7 199 30.2
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 2.0e-14 83.6 205 30.7
PSO170G5434 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-14 83.2 209 30.1
PSO764G0105 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-14 83.2 201 30.8
PSO210G6357 Papaver somniferum HOM05D008740 ORTHO05D006738 4.3e-14 82.4 145 37.9
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 9.7e-14 81.3 205 28.8
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-13 80.9 200 27.0
PSO339G1049 Papaver somniferum HOM05D007919 ORTHO05D006738 2.2e-13 80.1 166 30.7
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 2.8e-13 79.7 198 28.3
PSO063G7010 Papaver somniferum HOM05D007919 ORTHO05D006738 3.7e-13 79.3 179 33.0
PSO063G0028 Papaver somniferum HOM05D007919 ORTHO05D006738 8.2e-13 78.2 134 38.8
PSO339G5774 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-12 77.8 202 28.7
PSO832G0177 Papaver somniferum HOM05D008740 ORTHO05D006738 1.1e-12 77.8 138 38.4
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-12 77.0 136 36.0
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 5.3e-12 75.5 136 36.0
PSO063G6155 Papaver somniferum HOM05D007919 ORTHO05D006738 5.3e-12 75.5 178 27.5
PSO782G1079 Papaver somniferum HOM05D007919 ORTHO05D006738 5.3e-12 75.5 185 27.6
PSO063G2448 Papaver somniferum HOM05D007919 ORTHO05D006738 6.9e-12 75.1 167 28.1
PSO782G2749 Papaver somniferum HOM05D008740 ORTHO05D006738 9.1e-12 74.7 180 31.1
Aqoxy1G03074 Aquilegia oxysepala HOM05D000068 ORTHO05D008897 1.5e-11 73.9 136 34.6
PSO210G1764 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-11 72.8 157 33.1
PSO675G7368 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-11 72.8 137 34.3
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 7.7e-11 71.6 207 30.4
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 1.3e-10 70.9 191 27.7
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 1.7e-10 70.5 207 29.0
PSO210G3055 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-10 70.5 134 32.1
PSO161G0093 Papaver somniferum HOM05D007919 ORTHO05D006738 2.2e-10 70.1 137 33.6
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-10 70.1 140 33.6
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 2.9e-10 69.7 208 29.3
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.8e-10 69.3 209 29.7
PSO170G4716 Papaver somniferum HOM05D000003 ORTHO05D001026 3.8e-10 69.3 193 29.5
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 6.5e-10 68.6 198 29.8
PSO339G1538 Papaver somniferum HOM05D008740 ORTHO05D006738 6.5e-10 68.6 111 38.7
Hma1.2p1_0035F.1_g021825 Hydrangea macrophylla HOM05D000003 ORTHO05D000004 8.5e-10 68.2 203 30.5
PSO447G0188 Papaver somniferum HOM05D003407 ORTHO05D001026 8.5e-10 68.2 198 28.3
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-09 67.8 169 29.6
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.4e-09 67.4 196 29.1
PSO675G5608 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-09 66.6 134 30.6
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-09 65.9 211 28.9
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 4.2e-09 65.9 183 29.5
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 4.2e-09 65.9 183 27.9
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.2e-09 65.9 193 30.6
PSO765G0240 Papaver somniferum HOM05D003407 ORTHO05D001026 5.5e-09 65.5 197 27.4
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 5.5e-09 65.5 197 25.4
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 7.2e-09 65.1 199 24.6
PSO478G3681 Papaver somniferum HOM05D007919 ORTHO05D006738 7.2e-09 65.1 177 29.4
TAR346G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 7.2e-09 65.1 197 33.0
PSO675G4995 Papaver somniferum HOM05D007919 ORTHO05D006738 9.4e-09 64.7 199 27.6
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 9.4e-09 64.7 189 30.2
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 1.2e-08 64.3 197 25.4
PSO170G3207 Papaver somniferum HOM05D003407 ORTHO05D001026 1.2e-08 64.3 210 28.6
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-08 64.3 138 31.9
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.2e-08 64.3 199 29.1
Aqoxy7G02241 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-08 63.9 195 26.2
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 2.1e-08 63.5 186 29.0
MBI15_g34614_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-08 63.5 202 29.2
PSO675G0956 Papaver somniferum HOM05D003407 ORTHO05D001026 2.1e-08 63.5 195 24.6
Lj1g0015022 Lotus japonicus HOM05D000003 ORTHO05D000167 2.7e-08 63.2 193 29.0
PSO478G1651 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-08 63.2 184 28.8
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 3.6e-08 62.8 202 27.7
PSO832G1772 Papaver somniferum HOM05D007919 ORTHO05D006738 3.6e-08 62.8 133 29.3
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 3.6e-08 62.8 196 26.5
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 4.7e-08 62.4 205 28.3
PSO675G0882 Papaver somniferum HOM05D003407 ORTHO05D001026 4.7e-08 62.4 205 24.9
TAR449G0002 Trochodendron aralioides HOM05D000003 ORTHO05D008897 4.7e-08 62.4 206 27.7
PSO170G5422 Papaver somniferum HOM05D007919 ORTHO05D006738 7.9e-08 61.6 142 31.7
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 1.0e-07 61.2 195 27.7
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-07 61.2 196 28.1
Ah.07g198050 Amaranthus hybridus HOM05D000003 ORTHO05D008897 1.8e-07 60.5 194 27.3
PSO832G3899 Papaver somniferum HOM05D003407 ORTHO05D001026 1.8e-07 60.5 205 28.3
FvH4_2g34753 Fragaria vesca HOM05D000003 ORTHO05D014221 2.3e-07 60.1 134 34.3
PSO478G1036 Papaver somniferum HOM05D003407 ORTHO05D001026 2.3e-07 60.1 213 27.7
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.0e-07 59.7 174 31.6
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 3.0e-07 59.7 199 27.6
Lj4g0020141 Lotus japonicus HOM05D000003 ORTHO05D000126 3.0e-07 59.7 133 35.3
PSO210G0419 Papaver somniferum HOM05D000003 ORTHO05D001026 3.0e-07 59.7 125 33.6
PSO832G1441 Papaver somniferum HOM05D000003 ORTHO05D001026 3.0e-07 59.7 157 31.8
Aqoxy1G02661 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.9e-07 59.3 205 23.4
Gorai.001G187600 Gossypium raimondii HOM05D016941 ORTHO05D019244 3.9e-07 59.3 148 32.4
PSO017G4334 Papaver somniferum HOM05D003407 ORTHO05D001026 3.9e-07 59.3 204 27.9
PSO210G2487 Papaver somniferum HOM05D003407 ORTHO05D001026 3.9e-07 59.3 167 29.9
PSO210G4402 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-07 59.3 175 26.9
PSO478G4114 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-07 59.3 152 28.9
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 3.9e-07 59.3 139 30.2
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 5.1e-07 58.9 201 24.4
Lj3g0008362 Lotus japonicus HOM05D000003 ORTHO05D000004 5.1e-07 58.9 189 25.9
PSO017G4815 Papaver somniferum HOM05D000003 ORTHO05D001026 5.1e-07 58.9 188 22.3
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-07 58.9 203 31.0
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-07 58.9 194 29.4
TAR369G0893 Trochodendron aralioides HOM05D024081 ORTHO05D026209 5.1e-07 58.9 195 26.2
Aqoxy6G02545 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 6.7e-07 58.5 199 23.6
Aqoxy7G02555 Aquilegia oxysepala HOM05D009705 ORTHO05D000022 6.7e-07 58.5 202 27.7
FvH4_3g32111 Fragaria vesca HOM05D000003 ORTHO05D000004 6.7e-07 58.5 156 28.8
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 6.7e-07 58.5 193 26.9
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 6.7e-07 58.5 133 34.6
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.7e-07 58.5 215 26.5
PSO210G2580 Papaver somniferum HOM05D007919 ORTHO05D006738 6.7e-07 58.5 127 28.3
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 8.8e-07 58.2 209 26.8
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 8.8e-07 58.2 168 29.8
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 197 28.9
BraA09t38717Z Brassica rapa HOM05D004976 ORTHO05D004851 1.5e-06 57.4 204 26.5
PSO675G1658 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-06 57.0 136 31.6
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.0e-06 57.0 200 24.0
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 2.0e-06 57.0 219 26.0
vmacro03056 Vaccinium macrocarpon HOM05D000511 ORTHO05D000413 2.0e-06 57.0 207 25.6
PSO170G3605 Papaver somniferum HOM05D008740 ORTHO05D006738 2.6e-06 56.6 134 28.4
PSO170G6354 Papaver somniferum HOM05D003407 ORTHO05D001026 2.6e-06 56.6 138 28.3
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.6e-06 56.6 193 28.5
Aqoxy7G02362 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-06 55.8 197 24.9
CANSAT01G3218 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-06 55.8 194 27.8
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 4.4e-06 55.8 196 24.0
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 4.4e-06 55.8 134 28.4
Lj3g0004568 Lotus japonicus HOM05D000003 ORTHO05D007254 4.4e-06 55.8 211 24.6
LjContig00564g0011142 Lotus japonicus HOM05D000003 ORTHO05D007254 4.4e-06 55.8 202 26.7
Nn1g01561 Nelumbo nucifera HOM05D015489 ORTHO05D013616 4.4e-06 55.8 130 33.8
TAR383G0324 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.4e-06 55.8 136 35.3
FvH4_6g30670 Fragaria vesca HOM05D021529 ORTHO05D009449 5.7e-06 55.5 132 28.8
MBI07_g00493_MAGBIO Magnolia biondii HOM05D001761 ORTHO05D001719 5.7e-06 55.5 174 27.6
PSO170G0848 Papaver somniferum HOM05D003407 ORTHO05D001026 5.7e-06 55.5 131 29.8
PSO339G4879 Papaver somniferum HOM05D007979 ORTHO05D008897 5.7e-06 55.5 197 26.4
Rhsim01G0175900 Rhododendron simsii HOM05D001813 ORTHO05D026101 5.7e-06 55.5 156 28.8
CANSAT64G2778 Cannabis sativa HOM05D000003 ORTHO05D000167 7.4e-06 55.1 198 27.3
MBI18_g28063_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.4e-06 55.1 211 26.1
TWI23G0127 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 7.4e-06 55.1 204 28.9
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.7e-06 54.7 205 27.3


User provided reference genes

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