Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 4.1e-66 254.6 131 100.0
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 5.0e-64 247.7 131 96.9
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 9.5e-63 243.4 131 95.4
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 1.6e-54 216.1 132 84.8
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.4e-53 213.0 132 83.3
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 9.9e-52 206.8 131 80.9
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 3.2e-50 201.8 126 81.7
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.1e-50 201.4 132 78.8
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 5.4e-50 201.1 123 83.7
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 5.4e-50 201.1 131 78.6
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 9.2e-50 200.3 131 77.1
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.6e-49 198.0 131 77.1
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.6e-49 198.0 131 77.1
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 7.8e-49 197.2 131 76.3
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.0e-48 196.8 131 76.3
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 1.0e-48 196.8 132 78.8
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 2.3e-48 195.7 131 76.3
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.0e-48 195.3 128 77.3
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 3.0e-48 195.3 128 77.3
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 3.0e-48 195.3 128 77.3
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.9e-48 194.9 122 78.7
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.9e-48 194.9 131 77.1
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 5.1e-48 194.5 131 75.6
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 5.1e-48 194.5 131 76.3
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 6.6e-48 194.1 131 75.6
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 8.6e-48 193.7 127 78.0
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 8.6e-48 193.7 131 75.6
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 8.6e-48 193.7 131 76.3
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.1e-47 193.4 122 77.9
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 1.1e-47 193.4 131 76.3
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.9e-47 192.6 131 75.6
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.9e-47 192.6 131 75.6
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 4.3e-47 191.4 131 74.8
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 5.6e-47 191.0 121 78.5
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 7.3e-47 190.7 131 74.0
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 1.2e-46 189.9 122 78.7
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.2e-46 189.9 121 77.7
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 2.1e-46 189.1 135 75.6
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 2.8e-46 188.7 123 78.0
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 3.6e-46 188.3 132 74.2
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 3.6e-46 188.3 131 73.3
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 3.6e-46 188.3 120 77.5
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 4.7e-46 188.0 126 75.4
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 1.1e-45 186.8 120 79.2
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.1e-45 186.8 128 74.2
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 1.8e-45 186.0 127 77.2
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.8e-45 186.0 116 77.6
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 2.4e-45 185.7 120 76.7
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 5.2e-45 184.5 122 77.0
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 6.8e-45 184.1 121 75.2
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 6.8e-45 184.1 116 76.7
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 6.8e-45 184.1 123 77.2
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 8.9e-45 183.7 124 75.0
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 8.9e-45 183.7 131 73.3
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.2e-44 183.3 116 78.4
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 1.5e-44 183.0 138 70.3
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 2.0e-44 182.6 126 71.4
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 2.0e-44 182.6 139 69.1
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 2.6e-44 182.2 126 72.2
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.6e-44 182.2 126 71.4
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.6e-44 182.2 126 72.2
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 2.6e-44 182.2 131 76.3
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 3.4e-44 181.8 132 74.2
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 4.4e-44 181.4 116 75.0
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.6e-44 180.6 122 75.4
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 7.6e-44 180.6 131 70.2
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 1.3e-43 179.9 123 68.3
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 2.9e-43 178.7 117 73.5
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 3.8e-43 178.3 121 73.6
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 3.8e-43 178.3 126 69.8
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 4.9e-43 177.9 120 72.5
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 4.9e-43 177.9 109 80.7
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 8.4e-43 177.2 126 70.6
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-42 176.8 115 73.9
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.1e-42 176.8 126 71.4
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 1.1e-42 176.8 159 62.9
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 1.4e-42 176.4 120 70.0
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.9e-42 176.0 153 66.0
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 1.9e-42 176.0 126 71.4
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 1.9e-42 176.0 126 71.4
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 1.9e-42 176.0 116 73.3
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.9e-42 176.0 132 68.9
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 1.9e-42 176.0 142 66.9
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 2.4e-42 175.6 122 70.5
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 3.2e-42 175.3 122 68.9
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 4.2e-42 174.9 117 73.5
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 5.4e-42 174.5 109 78.9
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 3.5e-41 171.8 106 77.4
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 3.5e-41 171.8 126 68.3
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 3.5e-41 171.8 114 72.8
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 4.6e-41 171.4 117 70.1
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 7.8e-41 170.6 124 68.5
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 3.0e-40 168.7 131 68.7
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 6.6e-40 167.5 132 65.9
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 6.6e-40 167.5 126 69.0
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 6.6e-40 167.5 129 64.3
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 8.7e-40 167.2 120 65.8
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.1e-39 166.8 126 66.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 3.3e-39 165.2 117 70.9
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 4.3e-39 164.9 95 84.2
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 5.6e-39 164.5 128 66.4
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 5.6e-39 164.5 107 74.8
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 7.3e-39 164.1 132 64.4
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 7.3e-39 164.1 132 64.4
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 7.3e-39 164.1 132 64.4
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 7.3e-39 164.1 132 62.9
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 1.6e-38 162.9 131 62.6
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 2.8e-38 162.2 122 66.4
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 2.8e-38 162.2 113 68.1
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 3.6e-38 161.8 120 66.7
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 8.1e-38 160.6 105 71.4
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 8.1e-38 160.6 105 71.4
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 1.8e-37 159.5 122 65.6
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.2e-36 156.8 99 73.7
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.0e-36 156.0 162 54.3
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 2.6e-36 155.6 120 66.7
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 4.4e-36 154.8 126 61.1
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 4.4e-36 154.8 124 63.7
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 7.6e-36 154.1 125 61.6
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 1.3e-35 153.3 162 53.1
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 1.3e-35 153.3 97 73.2
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.7e-35 152.9 110 68.2
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 4.9e-35 151.4 100 69.0
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 8.4e-35 150.6 122 67.2
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.9e-34 149.4 124 61.3
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.7e-33 145.6 106 64.2
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.5e-33 145.2 115 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 6.0e-33 144.4 126 56.3
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 7.9e-33 144.1 134 53.7
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.0e-32 143.7 107 63.6
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.3e-32 142.5 92 75.0
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 6.6e-32 141.0 98 71.4
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 6.6e-32 141.0 106 67.0
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 3.3e-31 138.7 87 75.9
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 5.6e-31 137.9 86 79.1
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 5.6e-31 137.9 101 65.3
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.4e-29 132.5 84 73.8
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 1.5e-28 129.8 106 61.3
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 4.9e-27 124.8 117 58.1
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 8.4e-27 124.0 81 79.0
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 3.2e-26 122.1 117 58.1
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.6e-25 119.8 81 75.3
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 4.6e-25 118.2 81 71.6
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 5.1e-24 114.8 77 72.7
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.9e-23 112.8 94 59.6
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.5e-23 112.5 63 81.0
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 1.3e-22 110.2 76 69.7
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 2.8e-22 109.0 69 75.4
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.5e-20 103.2 95 54.7
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 2.6e-20 102.4 94 50.0
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.5e-18 95.9 61 77.0
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 2.3e-16 89.4 117 46.2
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 3.3e-15 85.5 105 44.8
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 3.3e-15 85.5 101 38.6
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 6.3e-14 81.3 69 58.0
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 4.5e-12 75.1 110 41.8
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.2e-10 68.9 49 63.3
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 6.1e-09 64.7 93 34.4
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 1.0e-08 63.9 39 71.8
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.5e-07 59.3 38 76.3


User provided reference genes

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