Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1656 Papaver somniferum HOM05D000366 ORTHO05D030420 2.2e-288 995.0 509 100.0
PSO017G4808 Papaver somniferum HOM05D000366 ORTHO05D030420 8.9e-250 866.7 502 90.8
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 7.7e-177 624.4 749 52.2
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 6.1e-158 561.6 687 51.7
PSO170G5984 Papaver somniferum HOM05D000366 ORTHO05D030420 3.2e-90 336.7 501 44.5
PSO455G0217 Papaver somniferum HOM05D000366 ORTHO05D030420 6.9e-77 292.4 452 43.4
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 9.5e-42 175.6 390 34.6
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 4.5e-36 156.8 315 32.7
TAR629G0390 Trochodendron aralioides HOM05D002478 ORTHO05D000437 1.7e-35 154.8 446 30.0
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 1.1e-34 152.1 282 33.3
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 1.2e-33 148.7 269 34.6
COL.COLO4_17591 Corchorus olitorius HOM05D000366 ORTHO05D000437 2.3e-32 144.4 327 34.3
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 4.0e-32 143.7 287 32.4
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 4.0e-32 143.7 264 36.4
Duzib213G0779 Durio zibethinus HOM05D000366 ORTHO05D000437 5.2e-32 143.3 316 33.2
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 5.2e-32 143.3 380 30.8
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 8.9e-32 142.5 330 31.5
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 4.9e-30 136.7 301 31.9
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 6.4e-30 136.3 267 33.7
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 6.4e-30 136.3 267 33.3
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.9e-29 134.8 249 33.3
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 4.1e-29 133.7 269 33.8
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 5.4e-29 133.3 329 30.4
Manes.15G092800 Manihot esculenta HOM05D000366 ORTHO05D000437 9.2e-29 132.5 354 30.8
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.2e-28 132.1 288 30.6
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 1.2e-28 132.1 326 30.4
Gorai.013G173100 Gossypium raimondii HOM05D000366 ORTHO05D000437 1.6e-28 131.7 305 33.4
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 3.5e-28 130.6 321 35.2
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 3.5e-28 130.6 386 27.5
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 3.5e-28 130.6 260 32.7
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 4.6e-28 130.2 386 27.2
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 7.8e-28 129.4 266 34.2
Gohir.A13G148700 Gossypium hirsutum HOM05D000366 ORTHO05D000437 2.3e-27 127.9 155 41.3
Gohir.D13G153200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 3.9e-27 127.1 144 41.7
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 9.5e-26 122.5 382 28.0
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 2.1e-25 121.3 275 33.8
QL08p026669 Quercus lobata HOM05D000366 ORTHO05D000437 3.6e-25 120.6 335 29.6
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 4.7e-25 120.2 317 32.5
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 8.0e-25 119.4 384 27.1
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 1.4e-24 118.6 271 33.6
vmacro11921 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 2.3e-24 117.9 339 31.9
Ciclev10018500m.g Citrus clementina HOM05D000366 ORTHO05D000437 3.1e-24 117.5 267 30.7
arahy.Tifrunner.gnm1.ann1.JLX6YP Arachis hypogaea HOM05D000366 ORTHO05D000437 4.0e-24 117.1 432 28.2
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 2.6e-23 114.4 247 31.6
Lalb_Chr20g0109351 Lupinus albus HOM05D000366 ORTHO05D000437 3.4e-23 114.0 256 32.0
Glyma.12G228700 Glycine max HOM05D000366 ORTHO05D000437 4.4e-23 113.6 254 31.5
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 4.4e-23 113.6 365 28.8
Rhsim04G0024800 Rhododendron simsii HOM05D000366 ORTHO05D000437 5.8e-23 113.2 267 32.2
FAN16G3372 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.3e-22 112.1 314 31.2
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 1.7e-22 111.7 250 31.2
arahy.Tifrunner.gnm1.ann1.7Z9IPQ Arachis hypogaea HOM05D000366 ORTHO05D000437 3.7e-22 110.5 432 27.3
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 3.7e-22 110.5 192 33.3
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 3.7e-22 110.5 375 28.3
Lalb_Chr01g0016641 Lupinus albus HOM05D000366 ORTHO05D000437 3.7e-22 110.5 284 30.6
FAN21G1728 Fragaria x ananassa HOM05D000366 ORTHO05D000437 6.4e-22 109.8 311 31.5
EL10Ac4g08310 Beta vulgaris HOM05D000366 ORTHO05D000437 1.1e-21 109.0 349 29.2
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 1.1e-21 109.0 262 29.0
VMungo1080G1639 Vigna mungo HOM05D000366 ORTHO05D000437 1.1e-21 109.0 249 30.5
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.4e-21 108.6 342 30.4
Sc16g0007490 Simmondsia chinensis HOM05D000366 ORTHO05D000437 1.9e-21 108.2 288 30.2
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 3.2e-21 107.5 151 34.4
Phvul.005G067300 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 3.2e-21 107.5 272 30.5
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 3.2e-21 107.5 201 32.3
FvH4_3g18560 Fragaria vesca HOM05D000366 ORTHO05D000437 4.1e-21 107.1 463 28.1
FAN11G1632 Fragaria x ananassa HOM05D000366 ORTHO05D000437 4.1e-21 107.1 463 28.1
Hma1.2p1_0052F.1_g029970 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 4.1e-21 107.1 263 28.1
Lj3g0018614 Lotus japonicus HOM05D000366 ORTHO05D000437 1.2e-20 105.5 255 31.4
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 1.6e-20 105.1 294 29.9
Aa31LG8G2180 Aethionema arabicum HOM05D000366 ORTHO05D000437 6.0e-20 103.2 389 28.5
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 7.8e-20 102.8 262 29.4
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 1.0e-19 102.4 251 29.9
Cpa.g.sc97.95 Carica papaya HOM05D000366 ORTHO05D000437 1.3e-19 102.1 338 26.9
CARHR089940 Cardamine hirsuta HOM05D000366 ORTHO05D000437 2.3e-19 101.3 427 28.3
Glyma.13G271100 Glycine max HOM05D000366 ORTHO05D000437 3.0e-19 100.9 212 32.1
BraA05t22266Z Brassica rapa HOM05D000366 ORTHO05D000437 3.9e-19 100.5 430 26.3
TPR.G30903 Trifolium pratense HOM05D000366 ORTHO05D000437 6.6e-19 99.8 253 30.0
AUR62019535 Chenopodium quinoa HOM05D000366 ORTHO05D000437 8.6e-19 99.4 327 30.0
Hma1.2p1_2017F.1_g311140 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 1.5e-18 98.6 387 25.3
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 4.3e-18 97.1 342 27.8
BolC5t33907H Brassica oleracea HOM05D000366 ORTHO05D000437 9.5e-18 95.9 311 29.6
Carub.0003s1464 Capsella rubella HOM05D000366 ORTHO05D000437 9.5e-18 95.9 519 24.1
Thhalv10019928m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 9.5e-18 95.9 362 27.3
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 1.2e-17 95.5 201 28.9
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.6e-17 95.1 196 31.6
Medtr2g078040 Medicago truncatula HOM05D000366 ORTHO05D000437 1.6e-17 95.1 255 27.8
Nitab4.5_0007253g0020 Nicotiana tabacum HOM05D000366 ORTHO05D000437 1.6e-17 95.1 253 28.5
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 2.1e-17 94.7 254 28.0
A05p34470 Brassica napus HOM05D000366 ORTHO05D000437 2.1e-17 94.7 442 26.0
Ca_03999_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 2.1e-17 94.7 257 28.4
AUR62036102 Chenopodium quinoa HOM05D000366 ORTHO05D000437 2.8e-17 94.4 326 28.8
BcaB06g25336 Brassica carinata HOM05D000366 ORTHO05D000437 3.6e-17 94.0 367 28.1
Solyc07g062600.4 Solanum lycopersicum HOM05D000366 ORTHO05D000437 3.6e-17 94.0 249 28.1
Sopen07g030830 Solanum pennellii HOM05D000366 ORTHO05D000437 3.6e-17 94.0 249 28.1
C05p52210 Brassica napus HOM05D000366 ORTHO05D000437 4.7e-17 93.6 299 29.8
Nitab4.5_0000246g0180 Nicotiana tabacum HOM05D000366 ORTHO05D000437 4.7e-17 93.6 253 28.5
ECA236G5053 Erigeron canadensis HOM05D000366 ORTHO05D000437 8.1e-17 92.8 179 35.8
AT3G14980 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 1.1e-16 92.4 521 24.6
Psat5g238000 Pisum sativum HOM05D000366 ORTHO05D000437 1.4e-16 92.0 415 25.8
AL3G27310 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 3.1e-16 90.9 410 27.1
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.2e-15 89.0 362 26.2
MSTRG.12870 Avicennia marina HOM05D000366 ORTHO05D000437 1.2e-15 89.0 254 27.2
THA.LOC104810441 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 1.2e-15 89.0 358 27.9
Os04g0433900 Oryza sativa ssp. japonica HOM05D000366 ORTHO05D000437 2.0e-15 88.2 340 25.3
HPP92_001078 Vanilla planifolia HOM05D000366 ORTHO05D000437 2.6e-15 87.8 294 25.5
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 4.4e-15 87.0 170 29.4
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 4.4e-15 87.0 366 24.3
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 5.8e-15 86.7 196 30.6
DCAR_021018 Daucus carota HOM05D000366 ORTHO05D000437 7.6e-15 86.3 288 26.0
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 7.6e-15 86.3 267 26.2
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 7.6e-15 86.3 303 25.7
Ah.06g185100 Amaranthus hybridus HOM05D000366 ORTHO05D000437 9.9e-15 85.9 260 28.1
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 1.3e-14 85.5 201 29.4
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 1.7e-14 85.1 129 36.4
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 7.8e-12 76.3 192 26.0
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 4.3e-10 70.5 206 28.6
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 5.6e-10 70.1 144 28.5
Eucgr.F01223 Eucalyptus grandis HOM05D000366 ORTHO05D000437 6.8e-08 63.2 259 23.2
BcaB06g29525 Brassica carinata HOM05D000366 ORTHO05D000437 2.0e-07 61.6 290 27.9


User provided reference genes

Program Settings