Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 0.0e+00 1082.0 551 100.0
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 4.3e-306 1053.9 588 92.9
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.2e-220 770.0 588 67.5
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 9.7e-218 760.4 601 65.4
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 5.0e-214 748.0 601 64.6
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 4.2e-213 745.0 608 63.7
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 2.1e-212 742.7 604 65.1
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.5e-210 736.5 605 63.5
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 4.4e-210 734.9 598 62.4
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.3e-209 733.4 598 63.4
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 8.3e-209 730.7 597 63.3
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.7e-207 725.7 599 63.4
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 6.5e-206 721.1 590 63.2
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-205 719.9 593 62.6
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 6.1e-204 714.5 632 59.8
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.4e-203 713.4 593 62.6
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.2e-202 710.3 602 61.5
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.5e-202 709.9 603 60.4
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 3.7e-201 705.3 603 60.5
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 8.3e-201 704.1 617 60.3
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 5.4e-200 701.4 590 60.5
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 7.7e-199 697.6 598 60.4
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.0e-198 697.2 606 60.2
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.0e-198 697.2 628 59.9
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 2.9e-198 695.7 605 59.7
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 6.6e-198 694.5 604 60.1
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 5.6e-197 691.4 596 60.7
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 5.6e-197 691.4 592 60.3
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 3.6e-196 688.7 602 60.6
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 6.1e-196 688.0 604 59.3
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.0e-195 687.2 593 59.9
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.3e-195 686.0 619 59.1
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 4.0e-195 685.3 604 58.8
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 3.4e-194 682.2 598 58.7
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 5.7e-194 681.4 593 59.2
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 9.8e-194 680.6 603 59.4
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.3e-193 680.2 587 61.2
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 3.7e-193 678.7 606 58.3
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 4.9e-193 678.3 608 58.2
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 4.1e-192 675.2 604 59.4
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 5.4e-192 674.9 592 59.0
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 9.2e-192 674.1 588 59.0
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 9.2e-192 674.1 613 57.6
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 9.2e-192 674.1 587 59.5
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.6e-191 673.3 590 60.8
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.0e-191 672.9 593 59.4
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.0e-191 672.9 601 57.7
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 2.7e-191 672.5 599 59.3
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 2.7e-191 672.5 597 59.1
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.3e-190 670.2 597 58.8
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 2.3e-190 669.5 589 59.3
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 2.3e-190 669.5 589 58.9
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.3e-190 669.5 589 58.2
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 3.0e-190 669.1 597 58.8
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 3.0e-190 669.1 586 59.2
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 8.6e-190 667.5 584 59.6
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 8.6e-190 667.5 597 58.8
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.5e-189 666.0 597 58.0
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.5e-189 666.0 597 57.1
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 7.3e-189 664.5 544 60.1
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 9.5e-189 664.1 598 57.2
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 2.8e-188 662.5 588 57.8
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 2.8e-188 662.5 597 58.3
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 8.0e-188 661.0 592 58.3
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 1.0e-187 660.6 597 57.0
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 2.3e-187 659.4 603 56.6
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 4.0e-187 658.7 603 56.6
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 2.6e-186 656.0 592 57.8
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 4.9e-185 651.7 586 57.5
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 6.4e-185 651.4 598 56.4
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.1e-184 650.6 603 56.2
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 1.9e-184 649.8 584 57.2
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 3.2e-184 649.0 561 59.4
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 7.0e-184 647.9 604 56.6
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 1.6e-183 646.7 582 57.6
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 2.0e-183 646.4 601 55.9
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 2.3e-182 642.9 581 56.1
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 8.6e-182 641.0 602 55.1
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.1e-181 640.6 597 55.4
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 4.3e-181 638.6 581 56.8
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 4.3e-181 638.6 602 55.1
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 5.6e-181 638.3 607 55.8
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 7.3e-181 637.9 591 56.3
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 7.3e-181 637.9 603 54.2
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 8.1e-180 634.4 620 56.0
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.1e-179 632.5 580 55.9
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 3.1e-179 632.5 608 54.9
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 3.1e-179 632.5 604 54.5
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 6.8e-179 631.3 582 57.2
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 8.9e-179 630.9 540 61.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 8.9e-179 630.9 607 54.9
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.2e-178 630.6 610 55.2
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 9.8e-178 627.5 604 54.0
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 2.2e-177 626.3 591 56.0
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.1e-176 624.0 586 53.9
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.4e-176 623.6 506 60.7
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 3.5e-175 619.0 592 56.2
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 4.6e-175 618.6 590 57.1
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 6.0e-175 618.2 589 56.0
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 7.8e-175 617.8 548 57.8
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 2.3e-174 616.3 598 54.0
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.0e-174 615.9 593 56.3
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 5.1e-174 615.1 606 54.5
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 1.7e-166 590.1 597 53.4
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 3.9e-166 589.0 592 53.0
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 1.5e-165 587.0 592 52.9
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 2.5e-165 586.3 598 52.8
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.5e-165 586.3 598 52.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 9.6e-165 584.3 598 53.0
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 8.1e-164 581.3 521 60.1
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 3.1e-163 579.3 598 52.8
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.0e-163 578.9 598 52.5
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.4e-162 575.5 598 52.3
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 9.9e-162 574.3 593 54.8
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 6.4e-161 571.6 568 53.0
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.1e-159 566.6 573 52.9
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.4e-152 543.9 590 50.0
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 2.5e-149 533.1 598 49.2
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 4.5e-146 522.3 599 48.9
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.3e-145 520.8 602 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.9e-144 516.9 615 47.8
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 2.0e-138 496.9 589 48.2
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 3.5e-135 486.1 593 47.2
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.3e-133 479.2 395 62.5
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 2.6e-130 469.9 465 54.6
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.1e-123 448.0 734 39.6
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 9.1e-115 418.3 380 60.5
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.4e-102 377.9 303 65.0
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 2.2e-100 370.5 628 37.9
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.0e-98 364.0 279 63.8
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 2.7e-98 363.6 453 42.8
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 8.5e-97 358.6 495 41.8
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 6.8e-94 349.0 609 37.6
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-91 340.9 317 57.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.5e-88 330.5 358 53.4
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 6.8e-70 269.2 189 67.7
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 6.0e-66 256.1 608 32.2
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 4.4e-61 240.0 218 54.1
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 9.2e-59 232.3 637 30.8
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 4.6e-58 229.9 267 49.1
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 7.8e-58 229.2 162 67.3
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.6e-55 220.3 136 72.8
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 1.3e-44 185.3 183 54.1
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.4e-43 181.8 347 38.6
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 2.8e-39 167.5 119 66.4
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 8.7e-33 146.0 113 61.9
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.1e-32 145.6 113 61.9
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 2.4e-30 137.9 80 80.0
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 3.1e-30 137.5 152 52.0
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 7.6e-29 132.9 101 65.3
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 9.9e-29 132.5 80 76.2
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.2e-28 131.3 101 64.4
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 7.9e-26 122.9 85 70.6
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 4.0e-22 110.5 117 51.3
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 6.9e-22 109.8 82 65.9
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.3e-17 95.5 122 45.9
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.1e-16 92.4 158 43.0
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 1.8e-14 85.1 137 43.8
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 6.9e-14 83.2 60 61.7
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 5.0e-12 77.0 144 41.0
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 8.5e-12 76.3 74 54.1
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 3.3e-08 64.3 44 72.7
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 4.8e-07 60.5 41 70.7


User provided reference genes

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