Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 2.3e-145 519.2 339 100.0
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 2.4e-126 456.1 340 91.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.1e-46 191.4 368 46.2
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.1e-41 171.8 330 37.6
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 5.9e-40 169.1 350 36.6
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.0e-39 168.3 362 36.7
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 1.0e-39 168.3 355 38.6
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 5.5e-38 162.5 255 45.1
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 7.2e-38 162.2 285 40.4
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 9.4e-38 161.8 334 38.0
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 9.4e-38 161.8 280 41.8
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 9.4e-38 161.8 276 41.3
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.2e-37 161.4 270 42.6
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 6.1e-37 159.1 255 42.4
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.4e-36 157.9 263 42.2
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.4e-36 157.9 254 44.1
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 2.3e-36 157.1 258 42.2
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 3.0e-36 156.8 282 41.1
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 8.8e-36 155.2 281 42.0
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.2e-35 154.8 262 42.4
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.5e-35 154.5 360 37.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.0e-35 154.1 282 38.3
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 2.6e-35 153.7 256 42.2
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 4.4e-35 152.9 292 39.4
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 9.7e-35 151.8 259 42.1
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 9.7e-35 151.8 269 42.4
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.7e-34 151.0 291 35.1
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.2e-34 150.6 347 34.3
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 3.7e-34 149.8 254 40.6
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 4.8e-34 149.4 345 36.8
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 8.3e-34 148.7 283 39.6
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.1e-33 148.3 261 41.0
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 1.4e-33 147.9 349 35.8
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.8e-33 147.5 258 40.3
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.8e-33 147.5 344 38.1
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.8e-33 147.5 304 37.2
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 2.4e-33 147.1 258 41.5
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 2.4e-33 147.1 284 36.3
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 3.1e-33 146.7 255 41.2
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 7.0e-33 145.6 351 34.5
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 1.2e-32 144.8 281 40.6
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.2e-32 144.8 337 35.3
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.6e-32 144.4 254 40.6
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 1.6e-32 144.4 256 39.5
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.6e-32 144.4 281 41.3
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 2.0e-32 144.1 353 34.0
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 2.0e-32 144.1 342 34.2
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 2.7e-32 143.7 254 39.8
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 2.7e-32 143.7 343 35.3
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 3.5e-32 143.3 350 35.4
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 5.9e-32 142.5 278 40.3
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.0e-31 141.7 278 37.1
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.7e-31 141.0 263 40.7
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 2.2e-31 140.6 259 40.2
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 2.9e-31 140.2 257 40.1
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 2.9e-31 140.2 283 36.7
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 5.0e-31 139.4 261 39.8
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 8.5e-31 138.7 255 39.2
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.1e-30 138.3 260 39.2
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-30 138.3 255 39.6
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 1.1e-30 138.3 260 39.6
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.5e-30 137.9 283 37.5
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.9e-30 137.5 254 38.6
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.5e-30 137.1 254 39.0
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 3.2e-30 136.7 261 36.0
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 4.2e-30 136.3 271 36.2
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 4.2e-30 136.3 311 36.7
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 9.4e-30 135.2 257 40.1
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.1e-29 132.5 266 38.0
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.0e-29 132.1 275 37.5
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 1.8e-28 131.0 306 35.6
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 2.3e-28 130.6 257 36.2
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 2.3e-28 130.6 234 39.7
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 6.8e-28 129.0 318 34.9
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 8.8e-28 128.6 377 31.3
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 1.2e-27 128.3 265 37.7
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 4.4e-27 126.3 301 33.9
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 7.5e-27 125.6 257 38.1
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.7e-26 124.4 266 36.8
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 2.2e-26 124.0 233 38.2
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 8.3e-26 122.1 236 38.1
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 2.4e-25 120.6 270 35.9
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 4.1e-25 119.8 295 34.9
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 5.4e-25 119.4 288 38.9
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 7.0e-25 119.0 275 35.6
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.2e-24 118.2 264 35.2
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 5.9e-24 115.9 266 35.3
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 5.9e-24 115.9 266 35.3
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 2.9e-23 113.6 269 34.2
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.8e-23 113.2 266 34.6
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.5e-22 111.3 255 35.7
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.2e-21 108.2 130 50.8
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.2e-21 108.2 176 42.0
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 2.1e-21 107.5 271 35.8
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 2.1e-21 107.5 271 35.8
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.7e-21 106.3 244 36.1
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.4e-20 104.8 271 33.9
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 1.8e-20 104.4 156 42.9
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 4.0e-20 103.2 240 35.4
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.2e-19 101.7 125 50.4
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 7.5e-19 99.0 256 35.2
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.2e-18 97.4 291 32.6
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 3.7e-18 96.7 291 33.0
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 3.7e-18 96.7 291 32.6
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 1.8e-17 94.4 247 41.3
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.1e-17 93.2 122 46.7
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.2e-16 91.7 58 77.6
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 5.9e-16 89.4 63 69.8
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.7e-15 87.8 216 36.1
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 1.7e-15 87.8 58 74.1
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.0e-13 79.0 225 32.0
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 4.0e-12 76.6 57 68.4
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 4.0e-12 76.6 62 58.1
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 6.8e-12 75.9 70 55.7
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.4e-11 73.6 136 40.4
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 8.3e-10 68.9 207 29.0
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 9.2e-09 65.5 64 54.7
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 2.7e-08 63.9 120 39.2
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 2.3e-07 60.8 48 58.3
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.3e-06 55.8 54 48.1
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.3e-06 55.8 54 48.1


User provided reference genes

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