Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.9e-66 255.8 131 100.0
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 3.5e-65 251.5 131 98.5
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 8.6e-64 246.9 131 96.9
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 1.9e-55 219.2 132 86.4
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.6e-54 216.1 132 84.8
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 2.3e-53 212.2 131 82.4
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.3e-51 206.5 131 80.2
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.3e-51 206.5 131 79.4
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 1.7e-51 206.1 132 79.5
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 2.2e-51 205.7 131 80.2
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 4.9e-51 204.5 131 82.4
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 6.4e-51 204.1 131 79.4
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 6.4e-51 204.1 131 79.4
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 1.1e-50 203.4 131 78.6
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 2.4e-50 202.2 131 77.9
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 2.4e-50 202.2 131 78.6
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.1e-50 201.4 128 79.7
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 4.1e-50 201.4 128 79.7
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 4.1e-50 201.4 128 79.7
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 9.2e-50 200.3 132 79.5
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 9.2e-50 200.3 131 78.6
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.2e-49 199.9 131 77.1
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.2e-49 199.9 127 80.3
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.6e-49 199.5 131 77.9
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.6e-49 199.5 131 77.1
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 2.1e-49 199.1 131 77.9
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.1e-49 199.1 131 77.9
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 2.7e-49 198.7 131 77.9
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.5e-49 198.4 131 77.1
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.6e-49 198.0 131 77.1
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.6e-49 198.0 131 77.1
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 6.0e-49 197.6 131 76.3
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.0e-48 196.8 131 76.3
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 1.7e-48 196.1 131 75.6
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 5.1e-48 194.5 131 76.3
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 8.6e-48 193.7 122 79.5
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 1.1e-47 193.4 131 74.8
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.1e-47 193.4 131 75.6
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 1.5e-47 193.0 132 76.5
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.5e-47 193.0 128 76.6
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 3.3e-47 191.8 132 75.0
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 3.3e-47 191.8 126 76.2
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 5.6e-47 191.0 120 80.8
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 5.6e-47 191.0 131 74.8
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 7.3e-47 190.7 120 78.3
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 9.6e-47 190.3 131 75.6
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.2e-46 189.9 116 78.4
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.6e-46 189.5 135 75.6
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 2.1e-46 189.1 126 73.8
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.8e-46 188.7 126 73.8
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 4.7e-46 188.0 126 74.6
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 6.2e-46 187.6 132 75.0
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 6.2e-46 187.6 126 73.8
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 6.2e-46 187.6 126 73.8
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 6.2e-46 187.6 131 73.3
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 6.2e-46 187.6 123 78.0
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 8.1e-46 187.2 124 75.8
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 8.1e-46 187.2 116 79.3
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 1.1e-45 186.8 132 75.0
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 1.1e-45 186.8 138 71.0
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 1.8e-45 186.0 149 67.8
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 2.4e-45 185.7 132 75.0
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 2.4e-45 185.7 131 71.8
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 3.1e-45 185.3 126 72.2
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 4.0e-45 184.9 126 72.2
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 6.8e-45 184.1 131 76.3
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 8.9e-45 183.7 123 69.9
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.5e-44 183.0 109 82.6
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.6e-44 182.2 131 73.3
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 3.4e-44 181.8 123 72.4
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 3.4e-44 181.8 123 72.4
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 3.4e-44 181.8 126 73.0
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 5.8e-44 181.0 126 73.0
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 5.8e-44 181.0 126 73.0
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 5.8e-44 181.0 120 71.7
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 5.8e-44 181.0 132 70.5
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 7.6e-44 180.6 159 63.5
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 9.9e-44 180.3 122 70.5
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 9.9e-44 180.3 126 71.4
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 9.9e-44 180.3 123 71.5
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 9.9e-44 180.3 139 68.3
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 1.7e-43 179.5 122 71.3
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 1.7e-43 179.5 109 80.7
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 2.2e-43 179.1 123 71.5
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 2.2e-43 179.1 117 75.2
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.9e-43 178.7 121 73.6
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 8.4e-43 177.2 126 69.8
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 1.4e-42 176.4 106 79.2
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 3.2e-42 175.3 126 69.0
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 5.4e-42 174.5 161 64.6
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 7.1e-42 174.1 124 69.4
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 9.3e-42 173.7 124 70.2
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 2.1e-41 172.6 131 69.5
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 2.1e-41 172.6 126 70.6
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 3.5e-41 171.8 126 68.3
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 4.6e-41 171.4 132 66.7
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 6.0e-41 171.0 129 65.1
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 7.8e-41 170.6 132 65.2
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 7.8e-41 170.6 120 66.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 1.7e-40 169.5 124 71.0
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.7e-40 169.5 107 76.6
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 2.3e-40 169.1 132 65.9
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 2.3e-40 169.1 132 65.9
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 2.3e-40 169.1 132 65.9
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 5.1e-40 167.9 131 64.1
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 1.1e-39 166.8 113 69.9
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 1.5e-39 166.4 113 69.9
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 1.5e-39 166.4 133 64.7
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.5e-39 166.4 95 85.3
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 2.5e-39 165.6 105 73.3
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 2.5e-39 165.6 132 65.2
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 2.5e-39 165.6 105 73.3
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 7.3e-39 164.1 131 63.4
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 4.8e-38 161.4 126 63.5
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 8.1e-38 160.6 125 64.0
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 8.1e-38 160.6 126 65.1
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 1.4e-37 159.8 162 54.9
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.4e-37 159.8 120 68.3
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 1.8e-37 159.5 124 65.3
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 4.0e-37 158.3 97 75.3
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 5.3e-37 157.9 110 70.0
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 6.9e-37 157.5 110 67.3
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 7.6e-36 154.1 122 68.0
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.3e-35 153.3 124 62.9
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 1.7e-35 152.9 162 53.1
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 8.4e-35 150.6 106 66.0
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.1e-34 150.2 115 62.6
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.2e-34 148.7 134 55.2
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 3.2e-34 148.7 107 65.4
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 4.2e-34 148.3 131 55.7
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 9.3e-34 147.1 92 77.2
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.6e-33 146.4 106 68.9
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 2.1e-33 146.0 98 73.5
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 1.0e-32 143.7 87 78.2
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 1.7e-32 142.9 101 67.3
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 5.1e-32 141.4 92 73.9
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 4.8e-30 134.8 106 63.2
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 8.1e-30 134.0 84 73.8
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 3.4e-28 128.6 82 80.5
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 7.6e-28 127.5 123 57.7
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 4.9e-27 124.8 123 57.7
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 4.9e-27 124.8 83 75.9
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.2e-25 120.2 127 53.5
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.1e-25 119.4 78 74.4
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 6.0e-25 117.9 94 61.7
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 3.0e-24 115.5 63 82.5
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 2.5e-23 112.5 76 71.1
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 7.4e-23 110.9 69 76.8
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 8.1e-22 107.5 94 52.1
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 5.3e-21 104.8 95 55.8
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.5e-18 95.9 61 77.0
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 3.9e-16 88.6 101 39.6
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 8.7e-16 87.4 123 44.7
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.9e-15 86.3 89 48.3
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 2.5e-15 85.9 70 60.0
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 5.3e-13 78.2 110 42.7
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.5e-10 69.3 50 62.0
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 2.3e-08 62.8 93 33.3
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 3.0e-08 62.4 49 65.3
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.5e-07 59.3 38 76.3


User provided reference genes

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