Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO455G0217 Papaver somniferum HOM05D000366 ORTHO05D030420 4.2e-184 647.9 327 100.0
PSO170G5984 Papaver somniferum HOM05D000366 ORTHO05D030420 3.6e-135 485.3 364 73.4
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 1.3e-89 334.0 427 48.7
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 2.0e-85 320.1 419 48.2
PSO478G1656 Papaver somniferum HOM05D000366 ORTHO05D030420 3.4e-77 292.7 452 43.4
PSO017G4808 Papaver somniferum HOM05D000366 ORTHO05D030420 6.0e-74 282.0 451 43.5
TAR629G0390 Trochodendron aralioides HOM05D002478 ORTHO05D000437 9.1e-30 135.2 338 31.4
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 2.7e-26 123.6 174 39.7
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 1.4e-25 121.3 195 39.0
Duzib213G0779 Durio zibethinus HOM05D000366 ORTHO05D000437 1.8e-25 120.9 213 34.7
Gorai.013G173100 Gossypium raimondii HOM05D000366 ORTHO05D000437 1.8e-25 120.9 203 37.9
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 5.2e-25 119.4 150 41.3
Gohir.D13G153200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 6.8e-25 119.0 150 42.0
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 3.4e-24 116.7 168 38.1
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 4.4e-24 116.3 190 33.7
Gohir.A13G148700 Gossypium hirsutum HOM05D000366 ORTHO05D000437 7.5e-24 115.5 162 39.5
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 1.3e-23 114.8 187 34.2
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 2.8e-23 113.6 157 43.9
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 2.8e-23 113.6 190 33.2
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 4.8e-23 112.8 151 39.7
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 6.3e-23 112.5 190 33.2
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 8.3e-23 112.1 173 35.8
COL.COLO4_17591 Corchorus olitorius HOM05D000366 ORTHO05D000437 1.4e-22 111.3 180 36.7
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 2.4e-22 110.5 132 40.9
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 3.1e-22 110.2 138 42.0
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 4.1e-22 109.8 163 39.3
Manes.15G092800 Manihot esculenta HOM05D000366 ORTHO05D000437 5.4e-22 109.4 134 40.3
FAN16G3372 Fragaria x ananassa HOM05D000366 ORTHO05D000437 7.0e-22 109.0 165 37.6
FAN21G1728 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.6e-21 107.8 165 37.6
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 1.6e-21 107.8 191 37.7
FvH4_3g18560 Fragaria vesca HOM05D000366 ORTHO05D000437 2.7e-21 107.1 194 33.5
FAN11G1632 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.7e-21 107.1 194 33.5
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 1.3e-20 104.8 183 33.9
Cpa.g.sc97.95 Carica papaya HOM05D000366 ORTHO05D000437 3.8e-20 103.2 135 42.2
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 3.8e-20 103.2 138 39.9
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 5.0e-20 102.8 162 35.8
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 5.0e-20 102.8 248 31.0
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 8.5e-20 102.1 162 35.8
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 1.1e-19 101.7 151 36.4
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 3.2e-19 100.1 175 37.1
Ciclev10018500m.g Citrus clementina HOM05D000366 ORTHO05D000437 3.2e-19 100.1 166 35.5
QL08p026669 Quercus lobata HOM05D000366 ORTHO05D000437 4.2e-19 99.8 192 35.4
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 5.5e-19 99.4 170 35.3
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 2.1e-18 97.4 142 37.3
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 2.7e-18 97.1 138 35.5
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 4.7e-18 96.3 164 32.3
Lalb_Chr01g0016641 Lupinus albus HOM05D000366 ORTHO05D000437 1.8e-17 94.4 154 37.7
vmacro11921 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 1.8e-17 94.4 245 31.0
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 2.3e-17 94.0 142 36.6
ECA236G5053 Erigeron canadensis HOM05D000366 ORTHO05D000437 3.0e-17 93.6 283 30.0
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 4.0e-17 93.2 157 36.9
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 5.2e-17 92.8 148 35.8
EL10Ac4g08310 Beta vulgaris HOM05D000366 ORTHO05D000437 8.8e-17 92.0 153 37.9
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 2.6e-16 90.5 131 40.5
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 2.6e-16 90.5 177 31.6
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 2.6e-16 90.5 170 34.1
Glyma.12G228700 Glycine max HOM05D000366 ORTHO05D000437 4.4e-16 89.7 160 33.8
arahy.Tifrunner.gnm1.ann1.JLX6YP Arachis hypogaea HOM05D000366 ORTHO05D000437 7.5e-16 89.0 198 31.8
AUR62019535 Chenopodium quinoa HOM05D000366 ORTHO05D000437 7.5e-16 89.0 161 37.3
Phvul.005G067300 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 7.5e-16 89.0 141 34.8
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.3e-15 88.2 156 33.3
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 1.7e-15 87.8 221 32.1
VMungo1080G1639 Vigna mungo HOM05D000366 ORTHO05D000437 1.7e-15 87.8 168 31.5
arahy.Tifrunner.gnm1.ann1.7Z9IPQ Arachis hypogaea HOM05D000366 ORTHO05D000437 2.2e-15 87.4 198 30.8
Lalb_Chr20g0109351 Lupinus albus HOM05D000366 ORTHO05D000437 2.2e-15 87.4 156 36.5
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 2.8e-15 87.0 135 34.8
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 2.8e-15 87.0 135 35.6
Lj3g0018614 Lotus japonicus HOM05D000366 ORTHO05D000437 3.7e-15 86.7 150 36.0
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 3.7e-15 86.7 132 36.4
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 6.3e-15 85.9 137 38.0
Glyma.13G271100 Glycine max HOM05D000366 ORTHO05D000437 6.3e-15 85.9 169 33.1
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 6.3e-15 85.9 140 35.0
Solyc07g062600.4 Solanum lycopersicum HOM05D000366 ORTHO05D000437 6.3e-15 85.9 154 35.1
Sopen07g030830 Solanum pennellii HOM05D000366 ORTHO05D000437 6.3e-15 85.9 154 35.1
AUR62036102 Chenopodium quinoa HOM05D000366 ORTHO05D000437 8.3e-15 85.5 148 35.8
Rhsim04G0024800 Rhododendron simsii HOM05D000366 ORTHO05D000437 8.3e-15 85.5 178 33.1
Nitab4.5_0007253g0020 Nicotiana tabacum HOM05D000366 ORTHO05D000437 1.4e-14 84.7 155 35.5
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 1.8e-14 84.3 154 33.1
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 3.1e-14 83.6 132 34.1
Sc16g0007490 Simmondsia chinensis HOM05D000366 ORTHO05D000437 3.1e-14 83.6 152 34.9
Hma1.2p1_0052F.1_g029970 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 4.1e-14 83.2 195 27.2
Hma1.2p1_2017F.1_g311140 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 4.1e-14 83.2 195 27.2
Nitab4.5_0000246g0180 Nicotiana tabacum HOM05D000366 ORTHO05D000437 7.0e-14 82.4 155 34.8
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 7.0e-14 82.4 143 35.0
Thhalv10019928m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 1.2e-13 81.6 139 36.7
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 1.6e-13 81.3 145 35.9
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 2.0e-13 80.9 147 32.0
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 4.5e-13 79.7 172 31.4
AL3G27310 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 1.0e-12 78.6 141 38.3
Psat5g238000 Pisum sativum HOM05D000366 ORTHO05D000437 1.3e-12 78.2 190 29.5
TPR.G30903 Trifolium pratense HOM05D000366 ORTHO05D000437 2.3e-12 77.4 177 32.2
HPP92_001078 Vanilla planifolia HOM05D000366 ORTHO05D000437 2.9e-12 77.0 170 28.8
Carub.0003s1464 Capsella rubella HOM05D000366 ORTHO05D000437 3.8e-12 76.6 138 36.2
DCAR_021018 Daucus carota HOM05D000366 ORTHO05D000437 8.6e-12 75.5 148 33.8
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 8.6e-12 75.5 136 33.8
BcaB06g25336 Brassica carinata HOM05D000366 ORTHO05D000437 1.1e-11 75.1 138 34.8
Ah.06g185100 Amaranthus hybridus HOM05D000366 ORTHO05D000437 1.5e-11 74.7 163 30.1
AT3G14980 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 1.5e-11 74.7 136 37.5
Os04g0433900 Oryza sativa ssp. japonica HOM05D000366 ORTHO05D000437 1.5e-11 74.7 142 31.7
MSTRG.12870 Avicennia marina HOM05D000366 ORTHO05D000437 1.9e-11 74.3 138 32.6
Aa31LG8G2180 Aethionema arabicum HOM05D000366 ORTHO05D000437 2.5e-11 73.9 168 31.5
CARHR089940 Cardamine hirsuta HOM05D000366 ORTHO05D000437 2.5e-11 73.9 132 39.4
DCAR_019593 Daucus carota HOM05D000366 ORTHO05D000437 2.5e-11 73.9 169 33.1
BolC5t33907H Brassica oleracea HOM05D000366 ORTHO05D000437 3.3e-11 73.6 138 34.8
THA.LOC104810441 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 7.2e-11 72.4 191 29.3
C05p52210 Brassica napus HOM05D000366 ORTHO05D000437 1.2e-10 71.6 138 34.1
Medtr2g078040 Medicago truncatula HOM05D000366 ORTHO05D000437 1.2e-10 71.6 184 29.9
BraA05t22266Z Brassica rapa HOM05D000366 ORTHO05D000437 1.6e-10 71.2 138 33.3
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 1.6e-10 71.2 132 31.1
A05p34470 Brassica napus HOM05D000366 ORTHO05D000437 2.1e-10 70.9 138 33.3
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 2.8e-10 70.5 140 30.0
Ca_03999_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 4.7e-10 69.7 142 32.4
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 8.0e-10 68.9 171 28.7
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 5.2e-09 66.2 290 26.2
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 4.4e-08 63.2 178 23.6
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 5.7e-08 62.8 223 25.1
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 7.5e-08 62.4 166 30.1


User provided reference genes

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