Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 7.0e-206 720.3 344 100.0
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 7.8e-157 557.4 295 90.2
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 5.5e-110 401.7 293 66.9
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 4.6e-109 398.7 295 69.2
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 1.0e-103 380.9 299 63.5
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 6.5e-103 378.3 291 65.3
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 2.5e-102 376.3 291 65.3
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 3.6e-101 372.5 290 64.1
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.0e-100 370.9 305 61.3
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 1.4e-100 370.5 283 66.1
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 2.3e-100 369.8 299 61.5
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 8.8e-100 367.9 299 61.2
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 1.7e-98 363.6 290 63.4
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 2.8e-98 362.8 290 62.8
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 6.3e-98 361.7 288 63.9
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 1.1e-97 360.9 282 62.4
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 1.8e-97 360.1 288 63.2
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 3.1e-97 359.4 288 63.2
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 4.1e-97 359.0 282 62.8
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 5.3e-97 358.6 281 63.7
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 2.0e-96 356.7 284 64.1
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 5.9e-96 355.1 286 62.9
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 1.0e-95 354.4 296 62.5
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 1.7e-95 353.6 284 63.7
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 1.7e-95 353.6 288 61.1
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 2.2e-95 353.2 298 62.4
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 2.2e-95 353.2 288 63.5
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 6.5e-95 351.7 281 62.6
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 8.5e-95 351.3 283 62.9
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 8.5e-95 351.3 288 61.5
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 2.5e-94 349.7 281 62.3
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 2.5e-94 349.7 283 61.8
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 2.5e-94 349.7 284 62.7
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 3.2e-94 349.4 281 63.0
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 7.2e-94 348.2 288 60.1
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 7.2e-94 348.2 287 61.0
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.6e-93 347.1 286 61.5
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 1.6e-93 347.1 285 64.2
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 4.7e-93 345.5 283 61.5
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 6.1e-93 345.1 324 56.2
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 6.1e-93 345.1 298 60.7
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 8.0e-93 344.7 298 60.7
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 2.3e-92 343.2 288 61.1
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 3.0e-92 342.8 288 61.5
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 4.0e-92 342.4 283 61.1
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 4.0e-92 342.4 281 61.6
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 8.8e-92 341.3 289 61.9
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 8.8e-92 341.3 278 62.2
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 8.8e-92 341.3 265 64.9
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 2.6e-91 339.7 282 60.6
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 4.4e-91 339.0 278 61.2
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.7e-90 337.0 280 61.1
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 2.2e-90 336.7 289 59.2
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 4.8e-90 335.5 288 60.4
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 4.8e-90 335.5 283 61.1
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 6.3e-90 335.1 293 59.4
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 3.1e-89 332.8 286 59.4
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 3.1e-89 332.8 276 62.0
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 4.1e-89 332.4 278 60.1
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 5.3e-89 332.0 282 61.0
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.6e-88 330.5 293 57.0
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.0e-88 330.1 279 59.5
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 2.7e-88 329.7 264 64.8
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 3.5e-88 329.3 280 58.9
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 5.9e-88 328.6 276 60.5
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 7.7e-88 328.2 280 59.3
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 1.7e-87 327.0 297 57.2
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 1.1e-86 324.3 280 58.9
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 2.5e-86 323.2 283 60.4
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 1.6e-85 320.5 283 60.1
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 2.7e-85 319.7 278 59.4
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 4.7e-85 318.9 286 59.1
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 1.0e-84 317.8 282 58.5
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 6.8e-84 315.1 283 59.7
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 4.4e-83 312.4 295 55.6
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 5.7e-83 312.0 280 54.6
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 3.5e-80 302.8 295 54.6
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 3.5e-80 302.8 277 56.0
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 2.5e-78 296.6 256 59.4
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.5e-78 296.6 284 57.0
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 1.0e-76 291.2 188 72.3
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 3.0e-76 289.7 231 61.5
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 1.7e-74 283.9 169 78.7
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 1.7e-74 283.9 185 70.8
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 6.6e-71 271.9 173 75.7
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 8.6e-71 271.6 246 56.9
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 3.6e-69 266.2 217 59.0
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 2.3e-68 263.5 192 65.1
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 2.9e-66 256.5 281 52.7
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.8e-65 253.8 155 76.1
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 7.0e-65 251.9 265 50.9
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 5.9e-64 248.8 185 63.2
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 4.3e-62 242.7 219 60.3
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 5.2e-60 235.7 225 55.1
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 9.5e-54 214.9 266 47.4
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 2.1e-53 213.8 264 47.7
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 7.1e-49 198.7 164 56.7
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 4.6e-48 196.1 206 55.8
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 8.1e-45 185.3 111 79.3
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 1.8e-44 184.1 178 48.3
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 3.1e-44 183.3 194 52.1
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 3.4e-43 179.9 406 36.2
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 4.1e-41 172.9 173 53.2
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 7.8e-40 168.7 141 63.1
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 5.1e-39 166.0 124 65.3
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 3.4e-35 153.3 180 47.8
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 1.9e-33 147.5 167 49.1
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 4.6e-32 142.9 183 40.4
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 3.9e-31 139.8 82 74.4
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 4.3e-30 136.3 175 40.6
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 6.2e-29 132.5 141 48.2
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 3.1e-28 130.2 84 73.8
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.5e-27 127.9 80 75.0
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.7e-26 124.4 88 65.9
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.3e-23 114.0 61 80.3
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.1e-16 90.9 55 65.5
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.1e-16 90.9 55 65.5
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.1e-14 85.1 49 77.6
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.5e-14 84.7 55 65.5
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 5.6e-14 82.8 53 64.2
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 1.3e-13 81.6 119 43.7
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 4.5e-11 73.2 65 61.5
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 5.8e-11 72.8 124 39.5
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 2.5e-09 67.4 86 39.5


User provided reference genes

Program Settings