Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO398G0010 Papaver somniferum HOM05D000268 ORTHO05D000261 7.6e-58 226.9 108 100.0
QL02p069517 Quercus lobata HOM05D000268 ORTHO05D000261 1.5e-18 96.3 87 54.0
Atru.chr6.2694 Acer truncatum HOM05D000268 ORTHO05D000261 4.5e-18 94.7 87 55.2
Eucgr.G01930 Eucalyptus grandis HOM05D000268 ORTHO05D000261 1.3e-17 93.2 84 54.8
FvH4_6g54300 Fragaria vesca HOM05D000268 ORTHO05D000261 1.3e-17 93.2 87 54.0
HanXRQChr15g0475731 Helianthus annuus HOM05D000268 ORTHO05D000261 1.7e-17 92.8 86 54.7
PSO135G0329 Papaver somniferum HOM05D000268 ORTHO05D000261 1.7e-17 92.8 85 58.8
Potri.002G237950 Populus trichocarpa HOM05D000268 ORTHO05D000261 2.9e-17 92.0 87 52.9
FAN05G0965 Fragaria x ananassa HOM05D000268 ORTHO05D000261 3.8e-17 91.7 91 51.6
Prupe.3G313600 Prunus persica HOM05D000268 ORTHO05D000261 3.8e-17 91.7 87 52.9
Thecc.04G047900 Theobroma cacao HOM05D000268 ORTHO05D000261 3.8e-17 91.7 87 52.9
PGR042G3237 Punica granatum HOM05D000268 ORTHO05D000261 5.0e-17 91.3 84 53.6
Gohir.A05G334400 Gossypium hirsutum HOM05D000268 ORTHO05D000261 6.5e-17 90.9 84 56.0
Gohir.D04G073300 Gossypium hirsutum HOM05D000268 ORTHO05D000261 6.5e-17 90.9 84 56.0
Gorai.012G082600 Gossypium raimondii HOM05D000268 ORTHO05D000261 6.5e-17 90.9 84 56.0
RcHm_v2.0_Chr2g0176511 Rosa chinensis HOM05D000268 ORTHO05D000261 6.5e-17 90.9 87 52.9
CsaV3_3G027790 Cucumis sativus L. HOM05D000268 ORTHO05D000261 8.5e-17 90.5 87 55.2
TAR475G0006 Trochodendron aralioides HOM05D000268 ORTHO05D000261 8.5e-17 90.5 87 52.9
GSVIVG01032986001 Vitis vinifera HOM05D000268 ORTHO05D000261 8.5e-17 90.5 87 54.0
Nitab4.5_0000519g0330 Nicotiana tabacum HOM05D000268 ORTHO05D000261 1.4e-16 89.7 90 54.4
COL.COLO4_27624 Corchorus olitorius HOM05D000268 ORTHO05D000261 2.5e-16 89.0 100 49.0
FAN09G1101 Fragaria x ananassa HOM05D000268 ORTHO05D000261 2.5e-16 89.0 91 51.6
MBI10_g39272_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D000261 3.2e-16 88.6 93 49.5
Potri.014G143900 Populus trichocarpa HOM05D000268 ORTHO05D000261 3.2e-16 88.6 86 52.3
Solyc02g094520.3 Solanum lycopersicum HOM05D000268 ORTHO05D000261 3.2e-16 88.6 84 56.0
Sopen02g039200 Solanum pennellii HOM05D000268 ORTHO05D000261 3.2e-16 88.6 84 56.0
Aqoxy5G03142 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 4.2e-16 88.2 84 52.4
CiPaw.04G001400 Carya illinoinensis HOM05D000268 ORTHO05D000261 4.2e-16 88.2 87 50.6
DCAR_014470 Daucus carota HOM05D000268 ORTHO05D000261 4.2e-16 88.2 86 53.5
MD09G1002600 Malus domestica HOM05D000268 ORTHO05D000261 4.2e-16 88.2 87 50.6
PSO732G0069 Papaver somniferum HOM05D000268 ORTHO05D000261 4.2e-16 88.2 86 54.7
Cc07_g01290 Coffea canephora HOM05D000268 ORTHO05D000261 5.5e-16 87.8 84 53.6
MELO3C014780.2 Cucumis melo HOM05D000268 ORTHO05D000261 5.5e-16 87.8 86 54.7
PSO675G7686 Papaver somniferum HOM05D000268 ORTHO05D000261 5.5e-16 87.8 86 54.7
Sed0027464 Sechium edule HOM05D000268 ORTHO05D000261 5.5e-16 87.8 87 52.9
Dinv25617 Davidia involucrata HOM05D000268 ORTHO05D000261 9.4e-16 87.0 87 51.7
Duzib147G1174 Durio zibethinus HOM05D000268 ORTHO05D000261 9.4e-16 87.0 94 50.0
Glyma.13G166000 Glycine max HOM05D000268 ORTHO05D000261 9.4e-16 87.0 101 48.5
Sc03g0005230 Simmondsia chinensis HOM05D000268 ORTHO05D000261 9.4e-16 87.0 84 53.6
Sed0001012 Sechium edule HOM05D000268 ORTHO05D000261 1.2e-15 86.7 87 52.9
arahy.Tifrunner.gnm1.ann1.MS6J7I Arachis hypogaea HOM05D000268 ORTHO05D000261 1.6e-15 86.3 100 50.0
ECA246G2162 Erigeron canadensis HOM05D000268 ORTHO05D000261 1.6e-15 86.3 111 45.0
Hma1.2p1_0421F.1_g149950 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 1.6e-15 86.3 87 51.7
Actinidia37718 Actinidia chinensis HOM05D000268 ORTHO05D000261 2.1e-15 85.9 87 49.4
Sc16g0004340 Simmondsia chinensis HOM05D000268 ORTHO05D000261 2.1e-15 85.9 84 52.4
MD17G1006800 Malus domestica HOM05D000268 ORTHO05D000261 2.7e-15 85.5 87 48.3
CSS0012708 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D000261 3.6e-15 85.1 87 50.6
Haze_14950 Corylus avellana HOM05D000268 ORTHO05D000261 3.6e-15 85.1 104 46.2
PSO478G4654 Papaver somniferum HOM05D000268 ORTHO05D000261 4.7e-15 84.7 87 49.4
Hma1.2p1_0868F.1_g230480 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 8.0e-15 84.0 87 50.6
PSO017G4606 Papaver somniferum HOM05D000268 ORTHO05D000261 8.0e-15 84.0 87 49.4
CAN.G473.159 Capsicum annuum HOM05D000268 ORTHO05D000261 1.0e-14 83.6 101 49.5
Glyma.19G103550 Glycine max HOM05D000268 ORTHO05D000261 1.0e-14 83.6 86 50.0
Psat3g093120 Pisum sativum HOM05D000268 ORTHO05D000261 1.0e-14 83.6 86 52.3
HPP92_007044 Vanilla planifolia HOM05D000268 ORTHO05D000261 1.0e-14 83.6 102 47.1
TWI18G0425 Tripterygium wilfordii HOM05D000268 ORTHO05D000261 1.4e-14 83.2 84 51.2
CANSAT64G0556 Cannabis sativa HOM05D000268 ORTHO05D000261 1.8e-14 82.8 84 50.0
Nn4g22135 Nelumbo nucifera HOM05D000268 ORTHO05D000261 1.8e-14 82.8 86 47.7
Glyma.16G047800 Glycine max HOM05D000268 ORTHO05D000261 2.3e-14 82.4 87 48.3
Hund12905 Selenicereus undatus HOM05D000268 ORTHO05D000261 2.3e-14 82.4 84 48.8
VMungo1383G2161 Vigna mungo HOM05D000268 ORTHO05D000261 2.3e-14 82.4 87 49.4
Aqoxy7G00112 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 3.0e-14 82.0 84 51.2
FAN14G3196 Fragaria x ananassa HOM05D000268 ORTHO05D000261 3.0e-14 82.0 91 48.4
Ca_08142_v3 Cicer arietinum L. HOM05D000268 ORTHO05D000261 5.2e-14 81.3 98 46.9
Medtr6g061200 Medicago truncatula HOM05D000268 ORTHO05D000261 5.2e-14 81.3 89 49.4
THA.LOC104822423 Tarenaya hassleriana HOM05D000268 ORTHO05D000261 5.2e-14 81.3 112 46.4
ATR0757G177 Amborella trichopoda HOM05D000268 ORTHO05D000261 6.7e-14 80.9 86 52.3
Cfa007163 Carpinus fangiana HOM05D000268 ORTHO05D000261 6.7e-14 80.9 87 47.1
Lj1g0012834 Lotus japonicus HOM05D000268 ORTHO05D000261 6.7e-14 80.9 86 48.8
Peaxi162Scf00420g00852 Petunia axillaris HOM05D000268 ORTHO05D000261 6.7e-14 80.9 82 53.7
arahy.Tifrunner.gnm1.ann1.ZU3NW2 Arachis hypogaea HOM05D000268 ORTHO05D000261 8.8e-14 80.5 116 42.2
Sabra02G0181400 Salix brachista HOM05D000268 ORTHO05D000261 8.8e-14 80.5 115 40.0
Sc04g0004620 Simmondsia chinensis HOM05D000268 ORTHO05D000261 1.1e-13 80.1 97 46.4
Aqoxy4G00352 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 1.5e-13 79.7 87 47.1
Medtr6g061270 Medicago truncatula HOM05D000268 ORTHO05D000261 1.5e-13 79.7 89 48.3
Manes.04G093100 Manihot esculenta HOM05D000268 ORTHO05D000261 2.0e-13 79.3 81 49.4
EL10Ac6g13405 Beta vulgaris HOM05D000268 ORTHO05D000261 3.3e-13 78.6 84 51.2
FAN07G2796 Fragaria x ananassa HOM05D000268 ORTHO05D000261 3.3e-13 78.6 83 48.2
SHI11394 Sapria himalayana HOM05D000268 ORTHO05D000261 3.3e-13 78.6 85 48.2
Phvul.002G094200 Phaseolus vulgaris HOM05D000268 ORTHO05D000261 5.7e-13 77.8 84 48.8
AUR62017429 Chenopodium quinoa HOM05D000268 ORTHO05D000261 7.4e-13 77.4 86 47.7
AUR62037824 Chenopodium quinoa HOM05D000268 ORTHO05D000261 7.4e-13 77.4 86 47.7
SGA_v2.0_scaffold34G13689 Striga asiatica HOM05D000268 ORTHO05D000261 7.4e-13 77.4 85 45.9
PSO349G0331 Papaver somniferum HOM05D000268 ORTHO05D000261 9.7e-13 77.0 87 47.1
PSO765G0155 Papaver somniferum HOM05D000268 ORTHO05D000261 9.7e-13 77.0 87 47.1
Zm00001eb142610 Zea mays HOM05D000268 ORTHO05D000261 1.7e-12 76.3 88 47.7
Ah.02g128840 Amaranthus hybridus HOM05D000268 ORTHO05D000261 2.2e-12 75.9 86 46.5
FvH4_4g12820 Fragaria vesca HOM05D000268 ORTHO05D000261 2.2e-12 75.9 83 48.2
FAN12G2834 Fragaria x ananassa HOM05D001055 ORTHO05D000867 2.2e-12 75.9 83 48.2
AT5G13960 Arabidopsis thaliana HOM05D000268 ORTHO05D000261 2.8e-12 75.5 103 44.7
Zm00001eb363830 Zea mays HOM05D000268 ORTHO05D000261 2.8e-12 75.5 85 47.1
Ah.03g136410 Amaranthus hybridus HOM05D000268 ORTHO05D000261 3.7e-12 75.1 87 46.0
Medtr7g084090 Medicago truncatula HOM05D000268 ORTHO05D000261 3.7e-12 75.1 85 47.1
SEGI_13571 Sequoiadendron giganteum HOM05D000268 ORTHO05D000261 3.7e-12 75.1 86 45.3
AL6G24620 Arabidopsis lyrata HOM05D000268 ORTHO05D000261 6.3e-12 74.3 104 44.2
Lalb_Chr22g0359981 Lupinus albus HOM05D000268 ORTHO05D000261 6.3e-12 74.3 86 45.3
Prupe.1G216000 Prunus persica HOM05D000268 ORTHO05D000261 6.3e-12 74.3 84 48.8
Os01g0927000 Oryza sativa ssp. japonica HOM05D000268 ORTHO05D000261 8.2e-12 73.9 94 42.6
QL03p049447 Quercus lobata HOM05D000268 ORTHO05D000261 8.2e-12 73.9 84 47.6
RcHm_v2.0_Chr4g0412311 Rosa chinensis HOM05D000268 ORTHO05D000261 8.2e-12 73.9 93 43.0
Thhalv10012985m.g Eutrema salsugineum HOM05D000268 ORTHO05D000261 1.4e-11 73.2 101 43.6
MD16G1130300 Malus domestica HOM05D000268 ORTHO05D000261 1.4e-11 73.2 84 45.2
Haze_12498 Corylus avellana HOM05D000268 ORTHO05D000261 2.4e-11 72.4 87 43.7
Manes.09G187800 Manihot esculenta HOM05D000268 ORTHO05D000261 2.4e-11 72.4 84 46.4
Ah.02g131440 Amaranthus hybridus HOM05D000268 ORTHO05D000261 3.1e-11 72.0 86 40.7
Migut.K00076 Erythranthe guttata HOM05D000268 ORTHO05D000261 3.1e-11 72.0 90 44.4
Rhsim08G0039100 Rhododendron simsii HOM05D000268 ORTHO05D000261 3.1e-11 72.0 109 40.4
Aa31LG11G15420 Aethionema arabicum HOM05D000268 ORTHO05D000261 4.1e-11 71.6 97 45.4
Lsat_1_v5_gn_3_106460 Lactuca sativa HOM05D000268 ORTHO05D000261 4.1e-11 71.6 81 44.4
CARHR199440 Cardamine hirsuta HOM05D000268 ORTHO05D000261 5.3e-11 71.2 115 41.7
MSTRG.24120 Avicennia marina HOM05D000268 ORTHO05D000261 7.0e-11 70.9 85 44.7
CiPaw.05G101800 Carya illinoinensis HOM05D000268 ORTHO05D000261 7.0e-11 70.9 86 44.2
FvH4_3g12630 Fragaria vesca HOM05D000268 ORTHO05D000261 7.0e-11 70.9 93 43.0
FvH4_4g22710 Fragaria vesca HOM05D000268 ORTHO05D000261 7.0e-11 70.9 86 43.0
Rhsim10G0001200 Rhododendron simsii HOM05D000268 ORTHO05D000261 7.0e-11 70.9 128 34.4
RcHm_v2.0_Chr4g0428931 Rosa chinensis HOM05D000268 ORTHO05D000261 7.0e-11 70.9 86 43.0
vmacro18380 Vaccinium macrocarpon HOM05D000268 ORTHO05D000261 7.0e-11 70.9 94 41.5
FAN25G1851 Fragaria x ananassa HOM05D000268 ORTHO05D000261 1.2e-10 70.1 93 41.9
FAN25G2092 Fragaria x ananassa HOM05D000268 ORTHO05D000261 1.2e-10 70.1 93 41.9
Sp6g30040 Schrenkiella parvula HOM05D000268 ORTHO05D000261 1.2e-10 70.1 112 42.0
Potri.003G162801 Populus trichocarpa HOM05D000268 ORTHO05D000261 1.6e-10 69.7 96 39.6
SalBow7G1630 Salvia bowleyana HOM05D000268 ORTHO05D000261 1.6e-10 69.7 83 45.8
ATR0665G331 Amborella trichopoda HOM05D000268 ORTHO05D000261 2.0e-10 69.3 80 50.0
AUR62005711 Chenopodium quinoa HOM05D000268 ORTHO05D000261 2.0e-10 69.3 89 43.8
Dinv19308 Davidia involucrata HOM05D000268 ORTHO05D000261 2.0e-10 69.3 84 45.2
Manes.06G009101 Manihot esculenta HOM05D000268 ORTHO05D000261 2.0e-10 69.3 84 42.9
AUR62028843 Chenopodium quinoa HOM05D000268 ORTHO05D000261 2.6e-10 68.9 89 43.8
COL.COLO4_13375 Corchorus olitorius HOM05D000268 ORTHO05D000261 2.6e-10 68.9 73 52.1
FAN07G1809 Fragaria x ananassa HOM05D000268 ORTHO05D000261 2.6e-10 68.9 86 41.9
Pp3c12_13280 Physcomitrium patens HOM05D000268 ORTHO05D000261 2.6e-10 68.9 84 42.9
Aqoxy1G04237 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 3.5e-10 68.6 92 44.6
FAN12G2079 Fragaria x ananassa HOM05D000268 ORTHO05D000261 3.5e-10 68.6 86 41.9
EL10Ac6g13607 Beta vulgaris HOM05D000268 ORTHO05D000261 1.0e-09 67.0 92 41.3
SMO358G0467 Selaginella moellendorffii HOM05D000268 ORTHO05D000261 1.0e-09 67.0 86 40.7
Atru.chr12.1411 Acer truncatum HOM05D000268 ORTHO05D000261 1.7e-09 66.2 102 38.2
MD13G1130100 Malus domestica HOM05D000268 ORTHO05D000261 2.2e-09 65.9 84 41.7
BcaB01g05324 Brassica carinata HOM05D000268 ORTHO05D000261 3.8e-09 65.1 101 39.6
C03p07290 Brassica napus HOM05D000268 ORTHO05D000261 3.8e-09 65.1 101 39.6
BraA03t09962Z Brassica rapa HOM05D000268 ORTHO05D000261 8.5e-09 63.9 98 37.8
DCAR_002969 Daucus carota HOM05D000268 ORTHO05D000261 8.5e-09 63.9 136 33.8
COL.COLO4_27860 Corchorus olitorius HOM05D000268 ORTHO05D000261 1.1e-08 63.5 86 40.7
Pp3c4_9720 Physcomitrium patens HOM05D000268 ORTHO05D000261 1.1e-08 63.5 81 43.2
Gorai.005G196900 Gossypium raimondii HOM05D000268 ORTHO05D000261 3.2e-08 62.0 102 36.3
Lj2g0023518 Lotus japonicus HOM05D000268 ORTHO05D000261 3.2e-08 62.0 86 41.9
Oeu047790.3 Olea europaea HOM05D000268 ORTHO05D000261 3.2e-08 62.0 131 31.3
A03p06320 Brassica napus HOM05D000268 ORTHO05D000261 7.2e-08 60.8 100 38.0
Gohir.A03G152200 Gossypium hirsutum HOM05D000268 ORTHO05D000261 2.1e-07 59.3 86 37.2
Gohir.D02G175300 Gossypium hirsutum HOM05D000268 ORTHO05D000261 2.1e-07 59.3 86 37.2
Lsat_1_v5_gn_4_1420 Lactuca sativa HOM05D000268 ORTHO05D000261 2.1e-07 59.3 82 40.2
Lj2g0011919 Lotus japonicus HOM05D000268 ORTHO05D000261 2.1e-07 59.3 82 42.7
BolC3t13231H Brassica oleracea HOM05D000268 ORTHO05D000261 4.7e-07 58.2 98 35.7
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 2.3e-06 55.8 54 48.1
vmacro17021 Vaccinium macrocarpon HOM05D000268 ORTHO05D000261 2.3e-06 55.8 84 38.1
ECA234G4764 Erigeron canadensis HOM05D000268 ORTHO05D000261 3.0e-06 55.5 81 39.5
Cc11_g15050 Coffea canephora HOM05D000268 ORTHO05D000261 5.2e-06 54.7 94 37.2
Lj8A276T41 Lonicera japonica HOM05D000268 ORTHO05D000261 6.7e-06 54.3 90 34.4
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 8.8e-06 53.9 54 48.1


User provided reference genes

Program Settings