Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 2.0e-200 702.2 356 100.0
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 8.8e-196 686.8 356 97.8
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.0e-95 352.4 354 55.1
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.5e-94 350.5 363 53.4
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.2e-91 340.9 352 53.4
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 6.5e-90 335.1 362 54.1
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 5.2e-87 325.5 355 51.5
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.6e-83 313.9 352 50.6
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 3.2e-81 306.2 348 50.6
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 4.2e-81 305.8 314 52.9
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 4.2e-81 305.8 354 48.3
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 4.7e-80 302.4 352 47.4
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.2e-77 293.5 347 48.7
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 4.9e-77 292.4 353 47.3
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.4e-76 290.0 354 47.5
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 4.1e-76 289.3 354 46.3
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 5.4e-76 288.9 348 47.1
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 1.6e-75 287.3 352 46.9
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 3.5e-75 286.2 354 44.6
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 3.5e-75 286.2 354 45.8
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 5.9e-75 285.4 354 46.0
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.0e-74 284.6 356 45.8
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 8.6e-74 281.6 356 46.6
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 4.3e-73 279.3 356 44.7
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 4.3e-73 279.3 355 46.2
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.2e-72 277.7 352 46.0
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.6e-72 277.3 354 46.6
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 2.1e-72 276.9 350 48.6
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.1e-72 276.9 321 48.6
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 2.8e-72 276.6 354 45.5
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 3.6e-72 276.2 339 46.0
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 3.6e-72 276.2 354 44.9
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 6.1e-72 275.4 350 47.4
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 8.0e-72 275.0 277 54.2
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 5.2e-71 272.3 198 67.2
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 5.2e-71 272.3 355 45.9
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 8.9e-71 271.6 322 48.4
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 1.5e-70 270.8 353 45.3
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 4.4e-70 269.2 353 45.3
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 4.4e-70 269.2 354 43.8
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.7e-69 266.2 318 45.9
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 8.3e-69 265.0 355 44.8
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 8.3e-69 265.0 351 44.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 3.2e-68 263.1 354 45.2
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 7.0e-68 261.9 345 44.3
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.6e-67 260.8 354 45.2
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.3e-66 256.9 354 44.4
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 3.0e-66 256.5 400 41.0
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 3.0e-66 256.5 355 44.5
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 3.0e-66 256.5 304 46.4
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 8.6e-66 255.0 355 43.7
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.1e-65 254.6 284 49.3
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 1.9e-65 253.8 353 43.6
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.5e-65 253.4 262 52.7
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 3.3e-65 253.1 267 52.4
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 4.3e-65 252.7 317 46.7
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 5.6e-65 252.3 262 53.8
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.1e-64 250.4 344 43.3
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.6e-64 249.6 317 46.4
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.2e-64 248.8 313 46.0
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 6.2e-64 248.8 281 51.2
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 6.2e-64 248.8 270 48.1
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 6.2e-64 248.8 308 44.2
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 1.0e-63 248.1 354 43.8
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.0e-63 248.1 350 43.1
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 4.0e-63 246.1 379 41.7
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 1.2e-62 244.6 346 43.1
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.0e-62 243.8 273 48.7
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 4.4e-62 242.7 390 40.5
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 7.5e-62 241.9 357 41.7
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 7.5e-62 241.9 351 42.5
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 7.5e-62 241.9 273 48.0
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.7e-61 240.7 314 44.3
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 2.2e-61 240.4 373 42.1
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 2.2e-61 240.4 276 48.9
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 4.9e-61 239.2 311 45.3
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 1.1e-60 238.0 247 52.6
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.4e-60 237.7 361 42.1
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.4e-60 237.7 326 43.6
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.1e-60 236.1 326 42.9
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 5.4e-60 235.7 280 48.9
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 7.0e-60 235.3 216 54.6
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 1.6e-59 234.2 326 42.6
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-59 233.8 326 42.6
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.9e-57 227.3 327 42.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.9e-57 227.3 284 45.1
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 5.6e-57 225.7 227 53.3
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 1.6e-56 224.2 189 57.1
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.8e-56 223.4 279 44.4
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.4e-55 221.1 243 51.0
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 4.0e-55 219.5 277 44.4
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.2e-51 208.0 218 49.1
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 1.6e-51 207.6 218 49.1
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 1.6e-51 207.6 218 49.1
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.6e-51 207.6 286 43.4
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 6.0e-51 205.7 210 50.5
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 7.8e-51 205.3 349 36.4
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 1.0e-50 204.9 286 43.4
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 3.9e-50 203.0 219 48.9
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 8.6e-50 201.8 264 44.3
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 2.5e-49 200.3 281 44.5
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 3.3e-49 199.9 279 43.0
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 3.3e-49 199.9 217 47.0
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 6.2e-48 195.7 259 44.8
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 8.1e-48 195.3 243 44.0
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 5.2e-47 192.6 200 48.5
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.1e-44 183.0 226 45.6
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 7.1e-44 182.2 222 47.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 9.2e-44 181.8 224 44.6
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 6.0e-43 179.1 203 45.3
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 3.0e-42 176.8 287 36.9
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.9e-42 176.4 224 45.1
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.6e-41 171.8 224 43.8
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 4.7e-40 169.5 149 53.7
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.7e-37 161.0 198 41.4
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.2e-37 160.6 218 46.3
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.1e-33 148.3 136 55.1
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 5.3e-31 139.4 113 57.5
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.0e-31 138.7 143 52.4
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.2e-30 138.3 187 42.2
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 2.4e-28 130.6 215 40.5
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 1.6e-24 117.9 204 35.8
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.9e-21 107.1 88 62.5
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.5e-14 84.7 75 60.0
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 5.7e-09 66.2 207 28.0
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.2e-06 58.5 47 63.8


User provided reference genes

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