Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 1.6e-134 483.0 300 100.0
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 8.0e-73 278.1 209 70.3
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 5.2e-48 195.7 113 84.1
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.2e-23 114.8 142 40.1
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 2.0e-23 114.0 137 38.7
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.4e-16 91.3 148 33.8
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 6.9e-16 89.0 77 51.9
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 7.6e-15 85.5 124 37.9
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 7.6e-15 85.5 94 43.6
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 9.9e-15 85.1 89 42.7
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 1.3e-14 84.7 68 54.4
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.7e-14 84.3 68 52.9
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.2e-14 84.0 126 35.7
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 2.9e-14 83.6 94 38.3
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 2.9e-14 83.6 97 38.1
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 2.9e-14 83.6 158 35.4
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 2.9e-14 83.6 112 40.2
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 3.8e-14 83.2 94 37.2
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.8e-14 83.2 77 45.5
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 3.8e-14 83.2 69 55.1
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 3.8e-14 83.2 90 40.0
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 4.9e-14 82.8 167 30.5
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 4.9e-14 82.8 102 40.2
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 6.4e-14 82.4 113 37.2
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 6.4e-14 82.4 80 46.2
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 6.4e-14 82.4 110 36.4
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.1e-13 81.6 90 37.8
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.1e-13 81.6 105 39.0
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.4e-13 81.3 68 48.5
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.4e-13 81.3 80 40.0
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 1.4e-13 81.3 86 40.7
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 1.9e-13 80.9 73 46.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 1.9e-13 80.9 73 46.6
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 1.9e-13 80.9 77 48.1
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 1.9e-13 80.9 88 39.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 1.9e-13 80.9 92 45.7
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 2.4e-13 80.5 77 46.8
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 2.4e-13 80.5 134 35.1
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 2.4e-13 80.5 145 32.4
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 2.4e-13 80.5 86 41.9
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.2e-13 80.1 80 45.0
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 3.2e-13 80.1 73 46.6
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 3.2e-13 80.1 87 37.9
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 3.2e-13 80.1 77 44.2
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 3.2e-13 80.1 70 45.7
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 4.2e-13 79.7 79 44.3
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 4.2e-13 79.7 87 41.4
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 5.4e-13 79.3 77 45.5
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 7.1e-13 79.0 108 35.2
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 7.1e-13 79.0 77 45.5
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 7.1e-13 79.0 156 29.5
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 7.1e-13 79.0 110 34.5
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 9.3e-13 78.6 82 43.9
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 9.3e-13 78.6 77 45.5
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 9.3e-13 78.6 80 42.5
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 1.2e-12 78.2 77 42.9
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.2e-12 78.2 195 27.2
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 1.2e-12 78.2 145 34.5
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.2e-12 78.2 70 48.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 1.6e-12 77.8 77 42.9
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.6e-12 77.8 101 39.6
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 2.1e-12 77.4 135 31.9
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 2.1e-12 77.4 101 39.6
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.7e-12 77.0 111 36.0
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 2.7e-12 77.0 102 37.3
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 2.7e-12 77.0 79 45.6
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 3.5e-12 76.6 69 46.4
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 4.6e-12 76.3 79 45.6
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.6e-12 76.3 111 36.0
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 4.6e-12 76.3 83 43.4
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 4.6e-12 76.3 77 44.2
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 6.0e-12 75.9 79 41.8
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 6.0e-12 75.9 79 41.8
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 6.0e-12 75.9 90 36.7
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 7.9e-12 75.5 74 43.2
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 7.9e-12 75.5 68 47.1
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 7.9e-12 75.5 133 36.1
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 1.0e-11 75.1 77 40.3
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.0e-11 75.1 78 46.2
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.0e-11 75.1 68 47.1
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 1.3e-11 74.7 90 36.7
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 1.8e-11 74.3 136 29.4
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 2.3e-11 73.9 129 34.9
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 3.0e-11 73.6 70 47.1
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 3.0e-11 73.6 75 40.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 3.0e-11 73.6 109 33.0
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 3.0e-11 73.6 114 35.1
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.9e-11 73.2 133 34.6
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.1e-11 72.8 171 31.6
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 5.1e-11 72.8 129 34.9
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 8.7e-11 72.0 128 32.8
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 8.7e-11 72.0 104 35.6
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 8.7e-11 72.0 108 31.5
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 8.7e-11 72.0 129 34.9
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 8.7e-11 72.0 113 33.6
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.1e-10 71.6 104 30.8
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 3.3e-10 70.1 85 40.0
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 3.3e-10 70.1 73 46.6
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 4.3e-10 69.7 90 33.3
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 4.3e-10 69.7 149 24.8
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 5.6e-10 69.3 74 40.5
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.6e-09 67.8 90 32.2
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.1e-09 67.4 74 33.8
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.8e-09 67.0 68 44.1
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 1.1e-08 65.1 63 39.7
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.1e-08 65.1 125 31.2
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.4e-08 64.7 94 36.2
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 1.4e-08 64.7 119 27.7
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 9.0e-08 62.0 105 29.5
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 4.5e-07 59.7 71 35.2
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.8e-07 59.3 45 48.9
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 7.6e-07 58.9 62 43.5
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 7.6e-07 58.9 139 26.6
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.2e-06 57.4 127 32.3
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.2e-06 57.4 127 32.3
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.9e-06 57.0 104 33.7
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 6.4e-06 55.8 65 44.6


User provided reference genes

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