Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 3.5e-294 1014.2 512 100.0
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 1.1e-255 886.3 578 79.6
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 4.3e-252 874.4 578 79.1
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 6.3e-187 657.9 579 60.4
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 8.3e-187 657.5 577 61.4
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 4.1e-186 655.2 594 60.6
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 7.0e-186 654.4 579 60.4
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 5.9e-185 651.4 579 59.9
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 1.0e-184 650.6 577 60.7
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 1.3e-184 650.2 574 61.5
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 8.5e-184 647.5 578 59.9
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 8.5e-184 647.5 577 61.0
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 1.1e-183 647.1 579 60.1
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.5e-183 646.7 577 60.8
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.9e-183 646.4 576 60.2
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 7.2e-183 644.4 577 58.8
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 7.2e-183 644.4 580 60.3
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 1.2e-182 643.7 577 60.7
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 2.7e-182 642.5 579 60.4
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 3.6e-182 642.1 579 59.2
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 6.1e-182 641.3 569 61.2
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 6.1e-182 641.3 579 59.9
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.0e-181 640.6 576 59.5
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.4e-181 640.2 477 69.8
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 2.3e-181 639.4 577 58.4
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 5.2e-181 638.3 580 59.8
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 6.8e-181 637.9 601 58.1
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.5e-180 636.7 579 59.8
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 3.4e-180 635.6 577 59.3
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 4.4e-180 635.2 577 59.3
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 5.7e-180 634.8 578 58.0
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 9.8e-180 634.0 579 59.4
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 9.8e-180 634.0 577 60.1
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 1.3e-179 633.6 579 59.4
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.7e-179 633.3 581 58.2
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 4.9e-179 631.7 579 59.2
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 4.9e-179 631.7 556 60.4
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 6.3e-179 631.3 478 69.2
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 8.3e-179 630.9 578 58.1
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 8.3e-179 630.9 578 58.1
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.1e-178 630.6 587 57.8
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 5.4e-178 628.2 576 58.9
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 7.0e-178 627.9 578 57.8
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 9.2e-178 627.5 586 58.5
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 9.2e-178 627.5 580 59.1
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.2e-177 627.1 578 58.8
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.6e-177 626.7 577 59.1
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 2.0e-177 626.3 588 57.3
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 2.0e-177 626.3 577 58.9
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 2.7e-177 625.9 586 58.5
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 3.5e-177 625.5 578 57.6
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 4.5e-177 625.2 578 58.1
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 5.9e-177 624.8 586 58.9
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 7.7e-177 624.4 586 58.9
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 7.7e-177 624.4 586 58.4
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 1.0e-176 624.0 586 58.5
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.3e-176 623.6 580 58.6
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 1.7e-176 623.2 577 58.1
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 2.3e-176 622.9 586 58.0
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 2.9e-176 622.5 531 62.1
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 3.8e-176 622.1 586 57.7
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 3.8e-176 622.1 586 57.5
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 6.6e-176 621.3 577 58.9
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 3.3e-175 619.0 585 58.8
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 1.2e-174 617.1 579 58.2
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.6e-174 616.7 586 57.5
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.8e-174 615.9 586 58.5
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 8.0e-174 614.4 580 57.2
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 1.0e-173 614.0 605 56.2
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 1.4e-173 613.6 581 58.2
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 4.0e-173 612.1 577 57.5
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 5.2e-173 611.7 579 57.2
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 6.8e-173 611.3 580 57.8
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.5e-172 610.1 582 57.7
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.0e-172 609.8 581 57.8
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 2.6e-172 609.4 577 56.8
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 3.4e-172 609.0 577 56.8
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 3.4e-172 609.0 586 57.3
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 7.5e-172 607.8 577 56.7
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 1.3e-171 607.1 479 66.2
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 1.3e-171 607.1 629 55.2
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.3e-171 607.1 577 57.0
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 4.9e-171 605.1 481 67.2
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 8.3e-171 604.4 581 57.3
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 2.4e-170 602.8 564 59.0
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 3.2e-170 602.4 577 56.5
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 4.1e-170 602.1 591 56.3
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 7.0e-170 601.3 579 56.8
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 1.7e-168 596.7 572 58.0
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 1.7e-168 596.7 577 56.2
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 6.6e-168 594.7 541 59.0
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 1.5e-167 593.6 576 56.1
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 3.3e-167 592.4 579 57.0
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 5.6e-167 591.7 609 54.0
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 7.3e-167 591.3 557 58.5
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 3.1e-165 585.9 579 56.5
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 6.8e-165 584.7 578 55.9
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 1.3e-163 580.5 712 47.6
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.7e-163 580.1 592 54.6
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.9e-163 578.6 579 56.0
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 6.4e-163 578.2 580 54.5
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 5.4e-162 575.1 477 64.6
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 7.0e-162 574.7 580 54.3
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 1.2e-161 573.9 578 54.2
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 3.0e-160 569.3 609 54.2
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 1.1e-159 567.4 579 55.6
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.5e-159 567.0 487 62.2
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 2.8e-158 562.8 489 63.2
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 2.8e-158 562.8 578 54.2
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.1e-157 560.8 564 57.3
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 6.8e-157 558.1 579 54.4
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.4e-156 555.4 454 64.1
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 1.7e-152 543.5 494 59.5
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-148 529.3 526 55.7
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.1e-141 507.7 487 56.7
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.5e-140 503.8 453 60.5
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 1.0e-136 491.1 583 47.3
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 5.6e-135 485.3 588 46.4
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 9.0e-133 478.0 463 58.3
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 9.0e-133 478.0 471 52.2
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 7.4e-127 458.4 586 47.8
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.6e-126 457.2 772 40.8
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 1.0e-120 438.0 387 61.8
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.6e-118 430.6 410 58.0
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 2.8e-118 429.9 420 55.0
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.4e-114 417.5 585 40.0
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 3.3e-111 406.4 398 58.8
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 5.9e-108 395.6 475 44.8
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 2.5e-106 390.2 317 65.9
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 1.2e-105 387.9 454 49.1
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 4.8e-102 375.9 287 69.0
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.4e-98 364.4 462 45.5
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.4e-93 347.1 289 64.7
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.3e-86 322.4 306 56.9
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.4e-85 321.2 805 33.0
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 7.0e-77 292.4 218 70.6
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.7e-76 290.4 307 54.4
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.0e-75 288.5 365 48.2
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.1e-73 280.8 269 54.3
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.3e-67 260.8 171 76.6
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 8.8e-64 248.8 190 68.9
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.1e-58 231.9 267 48.7
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.5e-55 221.5 230 55.2
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 3.6e-49 200.3 206 51.0
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 4.4e-47 193.4 206 48.5
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 3.2e-45 187.2 206 48.1
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.1e-42 178.7 183 51.4
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.5e-42 178.3 130 70.8
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.4e-40 171.8 170 51.8
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 4.0e-40 170.2 575 26.4
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.5e-34 151.0 128 58.6
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 1.1e-32 145.6 203 45.3
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 1.4e-32 145.2 124 58.9
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 5.2e-32 143.3 128 53.9
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 8.9e-32 142.5 128 54.7
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.2e-31 142.1 214 43.9
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 1.5e-31 141.7 128 53.9
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 3.4e-31 140.6 128 53.1
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 9.9e-31 139.0 169 49.7
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 4.1e-29 133.7 147 51.0
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 6.0e-28 129.8 164 45.1
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 6.2e-25 119.8 201 39.3
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 5.8e-23 113.2 148 47.3
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 5.8e-23 113.2 84 63.1
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 1.9e-21 108.2 66 80.3
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.9e-21 108.2 150 42.7
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 7.8e-20 102.8 151 41.7
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.7e-19 101.7 127 43.3
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 6.6e-19 99.8 64 75.0
MELO3C000039.2 Cucumis melo HOM05D003829 ORTHO05D004943 1.4e-13 82.0 83 50.6
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 3.2e-13 80.9 60 66.7
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 7.9e-12 76.3 168 36.3
Lsat_1_v5_gn_3_100941 Lactuca sativa HOM05D002028 ORTHO05D022527 1.3e-11 75.5 72 54.2
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 6.7e-11 73.2 127 39.4
Nitab4.5_0000138g0100 Nicotiana tabacum HOM05D003829 ORTHO05D284283 7.4e-10 69.7 100 41.0
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 9.6e-10 69.3 47 70.2
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 6.9e-08 63.2 45 64.4


User provided reference genes

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