Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2424 Papaver somniferum HOM05D000279 ORTHO05D009626 3.7e-51 204.5 99 100.0
PSO339G5899 Papaver somniferum HOM05D000279 ORTHO05D009626 3.0e-29 131.7 98 62.2
PSO339G6263 Papaver somniferum HOM05D000279 ORTHO05D009626 5.7e-28 127.5 103 62.1
PSO339G4030 Papaver somniferum HOM05D000279 ORTHO05D009626 1.0e-24 116.7 117 54.7
PSO151G0114 Papaver somniferum HOM05D008063 ORTHO05D009799 9.5e-23 110.2 96 57.3
PSO333G0034 Papaver somniferum HOM05D008063 ORTHO05D009799 8.9e-21 103.6 96 57.3
PSO675G2345 Papaver somniferum HOM05D000279 ORTHO05D009626 3.4e-20 101.7 103 52.4
PSO732G0505 Papaver somniferum HOM05D000279 ORTHO05D009626 2.9e-19 98.6 82 58.5
PSO675G8754 Papaver somniferum HOM05D009217 ORTHO05D009626 2.4e-18 95.5 95 51.6
PSO648G0102 Papaver somniferum HOM05D000279 ORTHO05D009626 6.6e-16 87.4 87 49.4
PSO648G0107 Papaver somniferum HOM05D000279 ORTHO05D009626 8.6e-16 87.0 67 61.2
PSO339G1853 Papaver somniferum HOM05D000279 ORTHO05D009626 4.3e-15 84.7 99 50.5
PSO339G2582 Papaver somniferum HOM05D009217 ORTHO05D009626 8.1e-14 80.5 81 55.6
PSO339G5009 Papaver somniferum HOM05D009217 ORTHO05D009626 8.1e-14 80.5 81 55.6
PSO339G0043 Papaver somniferum HOM05D009217 ORTHO05D009626 4.0e-13 78.2 97 47.4
PSO732G0030 Papaver somniferum HOM05D000279 ORTHO05D009626 2.9e-11 72.0 69 53.6
PSO732G0554 Papaver somniferum HOM05D000279 ORTHO05D009626 2.9e-11 72.0 69 53.6
PSO017G6659 Papaver somniferum HOM05D000279 ORTHO05D009626 3.7e-11 71.6 67 50.7
PSO151G0134 Papaver somniferum HOM05D009217 ORTHO05D009626 6.4e-11 70.9 94 43.6
PSO478G2122 Papaver somniferum HOM05D000279 ORTHO05D009626 8.3e-11 70.5 67 49.3
PSO339G0124 Papaver somniferum HOM05D009217 ORTHO05D009626 1.4e-10 69.7 104 41.3
PSO017G0635 Papaver somniferum HOM05D000279 ORTHO05D009626 9.2e-10 67.0 66 48.5
PSO063G1579 Papaver somniferum HOM05D000279 ORTHO05D000957 1.6e-09 66.2 62 51.6
PSO541G5616 Papaver somniferum HOM05D000279 ORTHO05D009626 3.5e-09 65.1 81 44.4
PSO732G0643 Papaver somniferum HOM05D000279 ORTHO05D009626 3.5e-09 65.1 68 51.5
CSS0032971 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 6.0e-09 64.3 88 45.5
PSO407G0016 Papaver somniferum HOM05D009217 ORTHO05D009626 2.3e-08 62.4 62 46.8
Gohir.A10G195901 Gossypium hirsutum HOM05D000279 ORTHO05D000498 5.1e-08 61.2 58 46.6
PSO339G3683 Papaver somniferum HOM05D009217 ORTHO05D009626 5.1e-08 61.2 63 42.9
PSO675G7173 Papaver somniferum HOM05D000279 ORTHO05D009626 5.1e-08 61.2 81 40.7
Dinv30117 Davidia involucrata HOM05D000279 ORTHO05D000957 8.6e-08 60.5 64 43.8
Oeu008932.1 Olea europaea HOM05D000279 ORTHO05D000957 1.1e-07 60.1 60 45.0
Oeu051489.1 Olea europaea HOM05D000279 ORTHO05D012714 1.5e-07 59.7 66 43.9
Oeu063093.1 Olea europaea HOM05D000279 ORTHO05D000957 1.5e-07 59.7 60 43.3
PSO339G0744 Papaver somniferum HOM05D000279 ORTHO05D009626 1.5e-07 59.7 64 46.9
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 1.9e-07 59.3 73 38.4
CSS0036302 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 2.5e-07 58.9 66 45.5
CSS0044284 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000498 2.5e-07 58.9 66 45.5
Oeu045010.1 Olea europaea HOM05D000279 ORTHO05D000957 2.5e-07 58.9 60 43.3
unitig_26.g9156 Utricularia gibba HOM05D000279 ORTHO05D000957 2.5e-07 58.9 60 41.7
unitig_749.g14213 Utricularia gibba HOM05D000279 ORTHO05D000957 2.5e-07 58.9 83 36.1
Ca_09093_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 3.3e-07 58.5 64 42.2
Oeu044684.1 Olea europaea HOM05D000279 ORTHO05D000957 3.3e-07 58.5 60 41.7
TPR.G14407 Trifolium pratense HOM05D000279 ORTHO05D000498 3.3e-07 58.5 101 36.6
CANSAT56G3672 Cannabis sativa HOM05D000279 ORTHO05D000498 4.3e-07 58.2 75 40.0
HanXRQChr07g0194491 Helianthus annuus HOM05D000279 ORTHO05D000957 4.3e-07 58.2 62 46.8
PSO339G3751 Papaver somniferum HOM05D009217 ORTHO05D009626 4.3e-07 58.2 64 46.9
PSO832G4092 Papaver somniferum HOM05D000279 ORTHO05D000957 4.3e-07 58.2 60 43.3
Prupe.2G052500 Prunus persica HOM05D000279 ORTHO05D000498 4.3e-07 58.2 60 40.0
RcHm_v2.0_Chr1g0330191 Rosa chinensis HOM05D000279 ORTHO05D000498 4.3e-07 58.2 92 32.6
PGSC0003DMG400040578 Solanum tuberosum HOM05D000385 ORTHO05D000269 4.3e-07 58.2 66 39.4
SGA_v2.0_scaffold392G50669 Striga asiatica HOM05D000279 ORTHO05D000957 4.3e-07 58.2 60 45.0
Aqoxy7G03564 Aquilegia oxysepala HOM05D000385 ORTHO05D000269 5.6e-07 57.8 33 66.7
TAR623G0805 Trochodendron aralioides HOM05D000279 ORTHO05D000498 5.6e-07 57.8 75 42.7
MSTRG.19340 Avicennia marina HOM05D000279 ORTHO05D000957 7.3e-07 57.4 60 41.7
MSTRG.5920 Avicennia marina HOM05D000279 ORTHO05D000957 7.3e-07 57.4 64 39.1
PSO063G0426 Papaver somniferum HOM05D000001 ORTHO05D002182 7.3e-07 57.4 63 42.9
PSO339G3585 Papaver somniferum HOM05D000279 ORTHO05D000957 7.3e-07 57.4 60 45.0
PSO384G4880 Papaver somniferum HOM05D000279 ORTHO05D000957 7.3e-07 57.4 60 45.0
ClCG10G017870 Citrullus lanatus HOM05D000279 ORTHO05D000957 9.5e-07 57.0 60 40.0
COL.COLO4_36697 Corchorus olitorius HOM05D000279 ORTHO05D000498 9.5e-07 57.0 61 42.6
CsaV3_3G038420 Cucumis sativus L. HOM05D000279 ORTHO05D000957 9.5e-07 57.0 60 40.0
Migut.L01858 Erythranthe guttata HOM05D000279 ORTHO05D000957 9.5e-07 57.0 60 41.7
Nn6g33249 Nelumbo nucifera HOM05D000279 ORTHO05D000957 9.5e-07 57.0 60 43.3
Oeu058183.1 Olea europaea HOM05D000279 ORTHO05D012714 9.5e-07 57.0 61 45.9
PSO017G4739 Papaver somniferum HOM05D000001 ORTHO05D002182 9.5e-07 57.0 60 45.0
RcHm_v2.0_Chr1g0330141 Rosa chinensis HOM05D000279 ORTHO05D000498 9.5e-07 57.0 92 31.5
Sed0024884 Sechium edule HOM05D000279 ORTHO05D000957 9.5e-07 57.0 60 40.0
TPR.G11073 Trifolium pratense HOM05D000279 ORTHO05D000498 9.5e-07 57.0 101 35.6
CiPaw.10G022100 Carya illinoinensis HOM05D000279 ORTHO05D000957 1.2e-06 56.6 60 40.0
Nn2g14445 Nelumbo nucifera HOM05D000279 ORTHO05D000957 1.2e-06 56.6 60 41.7
PSO040G0030 Papaver somniferum HOM05D009217 ORTHO05D009626 1.2e-06 56.6 65 41.5
RcHm_v2.0_Chr1g0330181 Rosa chinensis HOM05D000279 ORTHO05D000498 1.2e-06 56.6 80 33.8
SGA_v2.0_scaffold146G36244 Striga asiatica HOM05D000279 ORTHO05D000498 1.2e-06 56.6 65 40.0
SGA_v2.0_scaffold41G15779 Striga asiatica HOM05D000279 ORTHO05D000957 1.2e-06 56.6 56 46.4
TAR623G0727 Trochodendron aralioides HOM05D000279 ORTHO05D000957 1.2e-06 56.6 60 45.0
CSS0046580 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 1.6e-06 56.2 97 33.0
HanXRQChr05g0145941 Helianthus annuus HOM05D000279 ORTHO05D003808 1.6e-06 56.2 90 32.2
Hma1.2p1_0218F.1_g092260 Hydrangea macrophylla HOM05D000279 ORTHO05D000957 1.6e-06 56.2 60 41.7
PSO063G6986 Papaver somniferum HOM05D000279 ORTHO05D000957 1.6e-06 56.2 59 42.4
PSO801G0739 Papaver somniferum HOM05D009217 ORTHO05D009626 1.6e-06 56.2 96 38.5
SGA_v2.0_scaffold112G31675 Striga asiatica HOM05D000279 ORTHO05D000957 1.6e-06 56.2 60 40.0
TAR636G0839 Trochodendron aralioides HOM05D000279 ORTHO05D000957 1.6e-06 56.2 60 43.3
HanXRQChr14g0453171 Helianthus annuus HOM05D000279 ORTHO05D000957 2.1e-06 55.8 60 41.7
Lsat_1_v5_gn_1_56460 Lactuca sativa HOM05D000279 ORTHO05D000957 2.1e-06 55.8 60 43.3
MBI05_g00716_MAGBIO Magnolia biondii HOM05D000279 ORTHO05D000957 2.1e-06 55.8 60 41.7
MBI05_g02398_MAGBIO Magnolia biondii HOM05D000279 ORTHO05D000957 2.1e-06 55.8 60 41.7
Oeu003851.1 Olea europaea HOM05D000279 ORTHO05D000957 2.1e-06 55.8 60 38.3
PSO675G1156 Papaver somniferum HOM05D000279 ORTHO05D000498 2.1e-06 55.8 95 35.8
Psat0s1122g0120 Pisum sativum HOM05D000279 ORTHO05D000498 2.1e-06 55.8 78 35.9
RcHm_v2.0_Chr6g0252621 Rosa chinensis HOM05D000366 ORTHO05D000437 2.1e-06 55.8 61 39.3
Actinidia06194 Actinidia chinensis HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 40.0
Dinv25089 Davidia involucrata HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 41.7
ECA238G3220 Erigeron canadensis HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 38.3
ECA248G1226 Erigeron canadensis HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 43.3
Lj1A1060G23 Lonicera japonica HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 43.3
Lj5g0001468 Lotus japonicus HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 41.7
Lj5g0005924 Lotus japonicus HOM05D000279 ORTHO05D000498 2.8e-06 55.5 91 31.9
MBI11_g24569_MAGBIO Magnolia biondii HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 41.7
Solyc11g071700.2 Solanum lycopersicum HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 40.0
Sopen11g029370 Solanum pennellii HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 40.0
PGSC0003DMG402003010 Solanum tuberosum HOM05D000279 ORTHO05D000957 2.8e-06 55.5 60 40.0
AL3G23490 Arabidopsis lyrata HOM05D000279 ORTHO05D000957 3.6e-06 55.1 60 41.7
BcaC05g29312 Brassica carinata HOM05D000279 ORTHO05D000957 3.6e-06 55.1 59 47.5
C05p56030 Brassica napus HOM05D000279 ORTHO05D000957 3.6e-06 55.1 59 47.5
BolC5t34270H Brassica oleracea HOM05D000279 ORTHO05D000957 3.6e-06 55.1 59 47.5
Dinv11911 Davidia involucrata HOM05D000279 ORTHO05D000957 3.6e-06 55.1 60 41.7
ECA238G1980 Erigeron canadensis HOM05D000279 ORTHO05D000957 3.6e-06 55.1 60 43.3
FAN06G0100 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-06 55.1 80 33.8
FAN06G1761 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-06 55.1 80 33.8
PSO384G2513 Papaver somniferum HOM05D000279 ORTHO05D009626 3.6e-06 55.1 63 39.7
SGA_v2.0_scaffold16G07531 Striga asiatica HOM05D000279 ORTHO05D000957 3.6e-06 55.1 60 41.7
Thecc.10G123800 Theobroma cacao HOM05D000279 ORTHO05D000957 3.6e-06 55.1 78 37.2
TAR633G0382 Trochodendron aralioides HOM05D000279 ORTHO05D000957 3.6e-06 55.1 60 43.3
CSS0008338 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 4.7e-06 54.7 60 43.3
Dinv30120 Davidia involucrata HOM05D000279 ORTHO05D000957 4.7e-06 54.7 60 41.7
FvH4_7g04760 Fragaria vesca HOM05D000279 ORTHO05D000498 4.7e-06 54.7 96 29.2
FAN06G1972 Fragaria x ananassa HOM05D000279 ORTHO05D000498 4.7e-06 54.7 96 29.2
HanXRQChr07g0197021 Helianthus annuus HOM05D000279 ORTHO05D000957 4.7e-06 54.7 64 40.6
PSO017G5715 Papaver somniferum HOM05D028549 ORTHO05D000957 4.7e-06 54.7 91 38.5
PSO423G0205 Papaver somniferum HOM05D009217 ORTHO05D009626 4.7e-06 54.7 70 37.1
Psat6g049320 Pisum sativum HOM05D000279 ORTHO05D000957 4.7e-06 54.7 60 41.7
RcHm_v2.0_Chr1g0330151 Rosa chinensis HOM05D000279 ORTHO05D000498 4.7e-06 54.7 98 29.6
TAR369G0807 Trochodendron aralioides HOM05D000279 ORTHO05D000957 4.7e-06 54.7 60 43.3
BcaB06g25563 Brassica carinata HOM05D000279 ORTHO05D000957 6.2e-06 54.3 61 47.5
CAN.G963.5 Capsicum annuum HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 40.0
Dinv32145 Davidia involucrata HOM05D000279 ORTHO05D000957 6.2e-06 54.3 61 44.3
Duzib114G0612 Durio zibethinus HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 38.3
Migut.G01257 Erythranthe guttata HOM05D000385 ORTHO05D000269 6.2e-06 54.3 67 32.8
Migut.J00749 Erythranthe guttata HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 41.7
Migut.N02429 Erythranthe guttata HOM05D000279 ORTHO05D000957 6.2e-06 54.3 63 38.1
Thhalv10019920m.g Eutrema salsugineum HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 41.7
Gohir.D10G202750 Gossypium hirsutum HOM05D000279 ORTHO05D000498 6.2e-06 54.3 27 70.4
Gorai.011G227500 Gossypium raimondii HOM05D000279 ORTHO05D000498 6.2e-06 54.3 31 64.5
HanXRQChr11g0321601 Helianthus annuus HOM05D000279 ORTHO05D000957 6.2e-06 54.3 61 39.3
Peaxi162Scf00688g00024 Petunia axillaris HOM05D000385 ORTHO05D000269 6.2e-06 54.3 80 33.8
PGR044G2413 Punica granatum HOM05D000279 ORTHO05D000498 6.2e-06 54.3 66 40.9
Sp3g10120 Schrenkiella parvula HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 43.3
TAR623G0656 Trochodendron aralioides HOM05D000279 ORTHO05D000957 6.2e-06 54.3 59 40.7
GSVIVG01037528001 Vitis vinifera HOM05D000279 ORTHO05D000957 6.2e-06 54.3 60 41.7
Aqoxy2G00615 Aquilegia oxysepala HOM05D000279 ORTHO05D000957 8.1e-06 53.9 60 43.3
A05p37460 Brassica napus HOM05D000279 ORTHO05D000957 8.1e-06 53.9 59 45.8
BraA05t22544Z Brassica rapa HOM05D000279 ORTHO05D000957 8.1e-06 53.9 59 45.8
Carub.0006s0549 Capsella rubella HOM05D000279 ORTHO05D000957 8.1e-06 53.9 60 40.0
Migut.F00826 Erythranthe guttata HOM05D000279 ORTHO05D000957 8.1e-06 53.9 61 45.9
HanXRQChr05g0145641 Helianthus annuus HOM05D000279 ORTHO05D000957 8.1e-06 53.9 60 38.3
Hma1.2p1_0098F.1_g048380 Hydrangea macrophylla HOM05D000279 ORTHO05D000957 8.1e-06 53.9 60 40.0
Lj3C919G2 Lonicera japonica HOM05D000279 ORTHO05D000957 8.1e-06 53.9 60 41.7
MD07G1085400 Malus domestica HOM05D000279 ORTHO05D000498 8.1e-06 53.9 60 36.7
PSO017G0462 Papaver somniferum HOM05D000001 ORTHO05D002182 8.1e-06 53.9 86 34.9
PSO513G0129 Papaver somniferum HOM05D000279 ORTHO05D000957 8.1e-06 53.9 65 40.0
TPR.G12516 Trifolium pratense HOM05D000279 ORTHO05D000957 8.1e-06 53.9 43 48.8
Zm00001eb151920 Zea mays HOM05D000279 ORTHO05D000957 8.1e-06 53.9 65 43.1


User provided reference genes

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