Gene: Sopen11g029370

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g029370
  • Transcript Identifier Sopen11g029370.3
  • Gene Type Coding gene
  • Location Spenn-ch11 : 64941504-64962967 : positive

Gene Family Information

  • ID HOM05D000279
  • #Genes/#Species 1569/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g029370.3

Descriptions

  • Description ubiquitin-specific protease 13 (UBP13) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , MATH , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 , TRAF-type | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 ., Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IEA
InterProprotein deubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004843
IEA
InterProthiol-dependent deubiquitinase

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002083 MATH/TRAF domain
IPR038765 Papain-like cysteine peptidase superfamily
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR024729 Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain
IPR029346 Ubiquitin carboxyl-terminal hydrolase, C-terminal
IPR008974 TRAF-like
Mapman id Description
14.6.2.3 DNA damage response.nucleotide excision repair (NER).transcription-coupled nucleotide excision repair (TC-NER).deubiquitinase (UBP12-13)
19.2.3.1.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP12-13)