Gene: MSTRG.19340
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.19340
- Transcript Identifier MSTRG.19340.1
- Gene Type Coding gene
- Location ScioBoG_25048_HRSCAF_25167 : 3998669-4011372 : negative
Gene Family Information
- ID HOM05D000279
- #Genes/#Species 1569/99
- Phylogenetic origin
- ID ORTHO05D000957
- #Genes/#Species 539/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.19340.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016579 | IEA | InterPro | protein deubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004843 | IEA | InterPro | thiol-dependent deubiquitinase | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| IPR029346 | Ubiquitin carboxyl-terminal hydrolase, C-terminal |
| IPR002083 | MATH/TRAF domain |
| IPR008974 | TRAF-like |
| IPR038765 | Papain-like cysteine peptidase superfamily |
| IPR024729 | Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain |
| Mapman id | Description |
|---|---|
| 14.6.2.3 | DNA damage response.nucleotide excision repair (NER).transcription-coupled nucleotide excision repair (TC-NER).deubiquitinase (UBP12-13) |
| 19.2.3.1.1.5 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP12-13) |