Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 1.2e-134 484.6 324 100.0
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 1.4e-124 451.1 324 95.1
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 2.1e-75 287.7 325 56.3
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 2.1e-67 261.2 325 53.2
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 4.6e-62 243.4 328 57.0
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 8.6e-61 239.2 325 49.5
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.5e-60 238.4 325 51.4
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 2.5e-60 237.7 324 63.6
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 6.2e-59 233.0 326 54.3
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 6.2e-59 233.0 328 54.3
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 8.0e-59 232.6 293 46.8
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 1.1e-58 232.3 293 47.4
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 2.3e-58 231.1 293 46.4
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 4.0e-58 230.3 325 49.2
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 6.8e-58 229.6 293 45.7
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 1.5e-57 228.4 325 50.5
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 2.0e-57 228.0 325 53.8
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 2.0e-57 228.0 293 46.1
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 3.4e-57 227.3 325 53.8
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 7.5e-57 226.1 299 44.8
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 2.2e-56 224.6 326 54.0
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 2.9e-56 224.2 325 49.8
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 6.4e-56 223.0 293 46.1
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 6.4e-56 223.0 293 46.4
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 8.3e-56 222.6 325 48.3
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 1.4e-55 221.9 293 51.2
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 4.1e-55 220.3 293 50.5
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 4.1e-55 220.3 324 47.8
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 5.4e-55 219.9 324 47.5
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 5.4e-55 219.9 293 45.4
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 5.4e-55 219.9 325 49.8
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 9.2e-55 219.2 293 50.5
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 9.2e-55 219.2 325 48.0
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 1.2e-54 218.8 281 47.0
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 1.2e-54 218.8 334 47.9
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 1.2e-54 218.8 324 48.1
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 1.6e-54 218.4 293 51.2
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 2.1e-54 218.0 293 44.0
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 2.1e-54 218.0 295 44.1
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 2.1e-54 218.0 328 47.6
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 2.7e-54 217.6 293 42.7
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 2.7e-54 217.6 293 44.7
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 3.5e-54 217.2 321 48.9
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 7.8e-54 216.1 325 47.7
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.0e-53 215.7 323 48.9
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 1.3e-53 215.3 296 43.2
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.7e-53 214.9 323 48.3
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 1.7e-53 214.9 325 48.0
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 3.0e-53 214.2 329 47.7
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 3.0e-53 214.2 328 47.0
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 3.9e-53 213.8 325 52.9
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 2.5e-52 211.1 323 48.3
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 3.3e-52 210.7 325 51.4
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 3.3e-52 210.7 325 45.8
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 5.6e-52 209.9 323 47.7
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 5.6e-52 209.9 325 49.5
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 2.8e-51 207.6 325 48.3
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 3.6e-51 207.2 329 46.8
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 6.2e-51 206.5 293 44.4
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 1.4e-50 205.3 284 44.4
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 3.1e-50 204.1 330 45.2
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 2.0e-49 201.4 325 44.6
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 7.6e-49 199.5 325 43.4
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 9.9e-49 199.1 325 45.2
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 1.7e-48 198.4 291 42.6
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 2.2e-48 198.0 325 53.2
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 2.9e-48 197.6 279 51.6
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 6.4e-48 196.4 325 44.9
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 2.4e-47 194.5 278 42.1
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 4.1e-47 193.7 293 42.7
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 7.1e-47 193.0 295 47.8
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 3.5e-46 190.7 280 42.9
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 6.0e-46 189.9 293 39.2
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 2.3e-45 188.0 325 44.9
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 3.0e-45 187.6 325 36.3
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 3.0e-45 187.6 328 47.6
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 3.9e-45 187.2 325 36.6
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 6.6e-45 186.4 326 36.5
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 1.9e-44 184.9 326 36.5
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 1.9e-44 184.9 326 36.5
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 1.6e-43 181.8 346 42.8
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 1.1e-42 179.1 326 35.9
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 1.1e-42 179.1 280 45.4
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 2.4e-42 177.9 326 45.4
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 2.4e-42 177.9 326 45.4
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 3.1e-42 177.6 283 40.3
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 3.1e-42 177.6 276 39.9
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 3.1e-42 177.6 325 41.8
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 4.0e-42 177.2 286 50.7
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 6.8e-42 176.4 334 44.0
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.2e-41 175.6 273 39.2
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 1.2e-41 175.6 326 45.1
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 4.4e-41 173.7 172 57.6
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 4.4e-41 173.7 328 49.1
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 7.6e-41 172.9 273 41.8
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 9.9e-41 172.6 279 38.4
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 9.9e-41 172.6 279 38.4
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 7.1e-39 166.4 273 40.7
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 1.0e-37 162.5 273 39.2
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 8.7e-37 159.5 305 37.0
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 3.3e-36 157.5 326 48.5
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 7.3e-36 156.4 293 36.2
CSS0041788 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.8e-32 144.1 216 50.5
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 1.5e-28 132.1 221 48.9
Solyc06g054440.2 Solanum lycopersicum HOM05D002762 ORTHO05D004643 1.9e-28 131.7 199 39.2
MBI19_g20289_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 1.3e-27 129.0 109 78.9
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 6.2e-27 126.7 314 30.6
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 5.3e-26 123.6 191 50.3
Lalb_Chr18g0055921 Lupinus albus HOM05D002762 ORTHO05D004643 5.8e-25 120.2 167 50.9
Solyc06g054430.1 Solanum lycopersicum HOM05D002762 ORTHO05D004643 6.4e-24 116.7 89 65.2
Glyma.15G101100 Glycine max HOM05D002762 ORTHO05D004643 1.4e-23 115.5 109 73.4
Os10g0148800 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 6.0e-22 110.2 293 31.1
HanXRQChr11g0325871 Helianthus annuus HOM05D002762 ORTHO05D004643 1.8e-21 108.6 142 42.3
Pp3c6_11940 Physcomitrium patens HOM05D002762 ORTHO05D004643 5.1e-21 107.1 294 29.6
Cpa.g.c35915 Carica papaya HOM05D002762 ORTHO05D004643 2.1e-19 101.7 89 53.9
CSS0016618 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 6.2e-19 100.1 68 66.2
HanXRQChr11g0325861 Helianthus annuus HOM05D002762 ORTHO05D004643 1.5e-17 95.5 96 47.9
CARHR222230 Cardamine hirsuta HOM05D002762 ORTHO05D004643 2.0e-17 95.1 89 52.8
CARHR222240 Cardamine hirsuta HOM05D002762 ORTHO05D004643 4.9e-16 90.5 142 38.0
Oeu042638.1 Olea europaea HOM05D002762 ORTHO05D004643 6.5e-16 90.1 148 38.5
CSS0038196 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.1e-15 89.4 89 50.6
Oeu017376.1 Olea europaea HOM05D002762 ORTHO05D004643 1.6e-14 85.5 78 51.3
HanXRQChr11g0325851 Helianthus annuus HOM05D002762 ORTHO05D004643 4.6e-14 84.0 80 51.2
Pp3c6_5440 Physcomitrium patens HOM05D002762 ORTHO05D004643 3.1e-10 71.2 91 40.7
Pp3c20_15890 Physcomitrium patens HOM05D011912 ORTHO05D014147 1.5e-09 68.9 80 41.2


User provided reference genes

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