Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 1.1e-142 510.0 253 100.0
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 5.4e-139 497.7 253 97.2
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.5e-109 398.3 256 78.1
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 9.6e-104 380.6 254 75.6
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 1.8e-102 376.3 261 74.3
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 4.0e-102 375.2 253 75.5
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 2.0e-101 372.9 249 76.3
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 2.0e-101 372.9 254 76.0
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 5.8e-101 371.3 254 74.4
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 7.6e-101 370.9 252 73.8
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 3.8e-100 368.6 237 77.6
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 3.8e-100 368.6 257 73.5
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.4e-99 366.7 259 72.2
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 3.2e-99 365.5 255 72.9
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 3.2e-99 365.5 252 73.4
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 5.5e-99 364.8 256 73.4
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 9.3e-99 364.0 253 73.5
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 4.6e-98 361.7 229 77.3
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 4.6e-98 361.7 244 75.0
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 6.0e-98 361.3 253 73.1
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 1.0e-97 360.5 258 71.7
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 1.0e-97 360.5 252 72.6
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 2.3e-97 359.4 251 73.3
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 5.1e-97 358.2 245 73.1
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 5.1e-97 358.2 242 74.4
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 6.7e-97 357.8 259 71.4
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 6.7e-97 357.8 251 72.9
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 8.7e-97 357.5 251 71.3
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.1e-96 357.1 250 73.6
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.5e-96 356.7 267 71.2
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 1.9e-96 356.3 251 72.9
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 2.5e-96 355.9 248 73.8
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 2.5e-96 355.9 247 74.5
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 3.3e-96 355.5 248 73.8
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 4.3e-96 355.1 252 70.6
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 4.3e-96 355.1 249 71.1
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 5.7e-96 354.8 248 73.4
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 5.7e-96 354.8 226 77.9
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 7.4e-96 354.4 258 70.5
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 9.7e-96 354.0 253 71.9
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 2.8e-95 352.4 244 73.0
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.8e-95 352.4 250 71.6
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 2.8e-95 352.4 247 73.3
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 6.3e-95 351.3 257 69.6
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 8.2e-95 350.9 258 70.2
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 1.1e-94 350.5 255 72.5
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 1.4e-94 350.1 231 73.6
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 3.1e-94 349.0 252 70.6
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 3.1e-94 349.0 244 72.5
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 5.3e-94 348.2 245 72.2
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 5.3e-94 348.2 236 74.6
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 6.9e-94 347.8 225 77.8
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 6.9e-94 347.8 258 67.1
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 9.0e-94 347.4 248 73.0
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 9.0e-94 347.4 248 71.4
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 2.0e-93 346.3 251 71.3
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 2.6e-93 345.9 230 75.7
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 4.5e-93 345.1 248 72.6
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 5.9e-93 344.7 252 72.2
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.0e-92 344.0 257 68.9
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 1.0e-92 344.0 227 74.9
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 8.5e-92 340.9 236 75.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 8.5e-92 340.9 249 71.1
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.1e-91 340.5 258 69.8
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 2.5e-91 339.3 251 68.9
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 5.5e-91 338.2 257 68.5
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 5.5e-91 338.2 236 70.8
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 9.3e-91 337.4 256 68.0
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.6e-90 336.7 257 70.0
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 2.1e-90 336.3 237 70.0
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 3.6e-90 335.5 257 70.0
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 1.9e-88 329.7 285 63.5
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 4.3e-88 328.6 254 66.1
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.8e-87 325.9 253 67.6
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 6.3e-87 324.7 251 68.5
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 1.1e-86 323.9 245 68.2
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 3.4e-85 318.9 244 66.0
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 5.0e-84 315.1 244 65.6
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 5.0e-84 315.1 214 73.4
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 8.5e-84 314.3 253 64.4
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 1.6e-82 310.1 204 76.0
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.1e-82 309.7 244 64.3
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 2.7e-82 309.3 258 61.6
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.6e-82 308.5 244 63.9
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 2.0e-80 303.1 256 60.9
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 2.6e-80 302.8 243 63.0
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 5.7e-80 301.6 257 60.3
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 7.4e-80 301.2 244 62.7
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 4.8e-79 298.5 243 61.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.5e-77 293.5 200 75.0
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 3.4e-77 292.4 247 60.7
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.7e-76 290.0 242 61.6
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 8.5e-76 287.7 257 58.8
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 7.9e-74 281.2 244 59.8
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 5.2e-73 278.5 244 59.4
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 2.0e-72 276.6 244 59.0
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 7.4e-72 274.6 244 59.0
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 3.1e-70 269.2 254 57.1
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 2.9e-68 262.7 158 79.7
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 7.2e-67 258.1 281 51.2
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 9.4e-67 257.7 167 76.0
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 2.3e-65 253.1 164 76.2
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.0e-65 252.7 169 75.1
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 3.0e-65 252.7 184 70.1
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 2.6e-64 249.6 168 75.6
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 4.8e-63 245.4 169 74.6
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 6.1e-58 228.4 170 70.6
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 6.1e-58 228.4 241 53.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 2.6e-56 223.0 209 56.9
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 1.4e-54 217.2 242 53.7
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 7.7e-53 211.5 190 56.8
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 4.2e-51 205.7 175 65.7
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 4.9e-39 165.6 243 42.8
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 6.6e-36 155.2 103 76.7
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 7.5e-32 141.7 85 77.6
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 3.5e-29 132.9 208 41.8
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 3.5e-29 132.9 93 75.3
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 1.5e-27 127.5 199 45.2
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 6.2e-26 122.1 80 75.0
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 4.0e-25 119.4 80 70.0
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 9.9e-24 114.8 75 74.7
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 1.3e-20 104.4 88 61.4
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 2.3e-20 103.6 93 57.0
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.0e-20 103.2 113 54.9
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.8e-17 94.0 192 35.4
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.0e-17 92.8 58 75.9
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 2.0e-16 90.5 59 76.3
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 2.2e-15 87.0 143 37.8
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 1.6e-13 80.9 58 69.0
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 3.5e-13 79.7 58 67.2
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.1e-11 74.7 224 32.6
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 1.4e-09 67.8 64 54.7
GSVIVG01016925001 Vitis vinifera HOM05D000106 ORTHO05D000160 6.9e-09 65.5 42 69.0
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 6.4e-07 58.9 53 60.4


User provided reference genes

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