Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 0.0e+00 1359.4 714 100.0
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 0.0e+00 1317.8 714 96.8
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 2.9e-254 882.1 729 66.7
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 2.2e-246 855.9 725 64.4
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 3.2e-245 852.0 731 64.7
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 3.9e-243 845.1 726 63.8
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 5.6e-242 841.3 723 63.6
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 9.3e-237 823.9 725 63.2
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.1e-233 812.8 725 62.1
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.1e-233 812.8 725 62.6
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 3.2e-229 798.9 725 62.6
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-228 797.0 726 61.4
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 7.9e-228 794.3 722 63.0
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 1.8e-227 793.1 725 61.2
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 3.9e-227 792.0 726 61.2
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 8.7e-227 790.8 726 61.3
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 4.3e-226 788.5 723 61.3
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 9.6e-226 787.3 742 60.0
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.7e-225 785.4 727 60.7
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 2.4e-224 782.7 728 60.2
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 2.6e-223 779.2 729 61.0
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 5.8e-223 778.1 726 60.7
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 5.8e-223 778.1 725 60.6
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 3.8e-222 775.4 711 60.6
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 6.5e-222 774.6 718 60.7
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 1.4e-221 773.5 744 59.1
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 4.2e-221 771.9 726 60.6
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 7.1e-221 771.2 743 59.6
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 9.3e-221 770.8 726 60.7
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 9.3e-221 770.8 727 60.5
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 1.6e-220 770.0 722 60.9
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 8.7e-219 764.2 725 59.0
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 1.9e-218 763.1 726 59.0
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 1.2e-215 753.8 709 60.8
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.5e-215 753.4 723 59.3
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 2.0e-215 753.1 727 58.0
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 2.6e-215 752.7 714 60.8
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 1.9e-213 746.5 712 59.4
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 2.5e-213 746.1 736 59.0
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 2.5e-213 746.1 734 58.6
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 4.2e-213 745.3 726 58.1
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 7.2e-213 744.6 724 58.3
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.2e-212 743.8 725 58.8
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 2.1e-212 743.0 724 58.7
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 7.9e-212 741.1 727 58.9
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 2.0e-210 736.5 721 58.5
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 1.3e-209 733.8 721 58.1
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 1.7e-209 733.4 725 58.3
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.7e-209 733.4 724 57.6
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 2.2e-209 733.0 720 58.1
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 8.2e-209 731.1 727 57.8
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.1e-208 730.7 725 57.8
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.8e-208 729.9 722 58.2
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 3.1e-208 729.2 721 58.0
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 4.1e-208 728.8 721 58.7
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 6.9e-208 728.0 722 57.8
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 9.1e-208 727.6 722 57.8
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 9.1e-208 727.6 727 57.6
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 1.2e-207 727.2 723 58.4
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 2.0e-207 726.5 729 59.1
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 5.0e-206 721.8 726 57.9
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 1.1e-205 720.7 736 57.9
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.9e-205 719.9 724 57.2
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 2.5e-205 719.5 752 56.2
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 2.5e-205 719.5 718 57.8
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 1.2e-204 717.2 731 57.2
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 2.3e-203 713.0 736 57.5
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 8.8e-203 711.1 736 57.5
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 1.5e-202 710.3 730 57.7
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 3.3e-202 709.1 719 57.0
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 7.4e-202 708.0 715 58.3
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 2.2e-201 706.4 721 57.3
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 4.8e-201 705.3 727 55.4
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.4e-200 703.7 732 56.8
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 1.5e-199 700.3 725 54.6
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 2.6e-199 699.5 729 56.7
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 5.9e-199 698.4 728 55.4
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 1.3e-198 697.2 729 56.5
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 2.2e-198 696.4 721 57.7
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 7.2e-197 691.4 726 57.6
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 3.0e-195 686.0 730 55.8
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 5.2e-195 685.3 727 57.6
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 8.8e-195 684.5 729 57.8
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 2.6e-194 682.9 730 55.6
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 3.3e-194 682.6 730 55.6
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 1.3e-193 680.6 728 54.9
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 4.8e-193 678.7 726 56.5
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 4.8e-193 678.7 726 56.5
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 1.1e-192 677.6 727 56.4
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 1.1e-192 677.6 728 54.8
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 2.4e-192 676.4 729 56.4
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 3.1e-192 676.0 729 56.4
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 9.1e-192 674.5 726 56.1
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 1.2e-191 674.1 726 56.6
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 1.2e-191 674.1 732 56.1
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 2.0e-191 673.3 729 55.1
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 2.6e-191 672.9 727 55.6
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 4.5e-191 672.2 729 56.1
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 7.7e-191 671.4 729 56.7
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 7.7e-191 671.4 882 48.1
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 1.0e-190 671.0 726 55.0
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 5.0e-190 668.7 727 56.4
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 1.1e-189 667.5 727 56.1
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 4.2e-189 665.6 728 55.8
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 7.2e-189 664.8 721 54.5
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 6.1e-188 661.8 726 54.8
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 2.6e-186 656.4 731 54.3
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 7.5e-186 654.8 728 53.3
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.3e-185 654.1 720 53.6
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 8.3e-185 651.4 734 54.2
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 4.5e-183 645.6 733 54.3
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 5.9e-183 645.2 715 55.5
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 8.8e-179 631.3 735 52.7
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 1.3e-177 627.5 727 53.2
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 7.0e-176 621.7 743 51.7
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 2.5e-173 613.2 656 55.6
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.6e-172 610.5 757 50.5
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 4.0e-171 605.9 729 52.8
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 4.9e-169 599.0 713 51.8
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.2e-164 584.3 730 50.5
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 8.0e-164 581.6 743 50.1
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 1.9e-160 570.5 746 49.5
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 2.0e-159 567.0 712 51.1
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 5.2e-155 552.4 708 51.1
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 5.2e-147 525.8 386 72.0
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 5.2e-139 499.2 749 44.5
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.0e-134 483.4 383 67.4
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.0e-134 483.4 383 67.4
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 4.8e-132 476.1 396 67.2
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 2.0e-122 444.1 558 50.5
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 4.5e-122 443.0 326 74.5
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 1.8e-118 431.0 622 44.4
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 1.8e-118 431.0 329 71.4
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 2.7e-103 380.6 768 38.7
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 5.7e-101 372.9 745 38.0
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 3.4e-98 363.6 736 37.6
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 1.1e-96 358.6 782 36.2
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 3.2e-96 357.1 640 40.6
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 6.7e-94 349.4 398 50.8
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 1.3e-92 345.1 400 51.5
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 6.9e-91 339.3 486 45.1
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 3.8e-73 280.4 397 45.3
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 1.7e-65 255.0 585 34.9
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 2.4e-59 234.6 332 46.1
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.6e-58 231.9 407 42.5
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 2.0e-58 231.5 582 34.0
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.1e-55 221.5 151 77.5
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 3.6e-55 220.7 354 40.1
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 7.0e-51 206.5 356 39.9
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 8.6e-41 172.9 152 56.6
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 2.5e-40 171.4 249 43.8
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 4.4e-37 160.6 161 57.8
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.3e-33 148.3 172 52.9
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 9.5e-32 142.9 269 38.3
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 4.9e-28 130.6 69 92.8
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 8.4e-28 129.8 402 29.1
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 9.2e-27 126.3 69 91.3
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.0e-25 122.9 379 30.1
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 9.9e-21 106.3 62 83.9
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 8.4e-20 103.2 57 91.2
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 3.5e-18 97.8 51 92.2
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 6.0e-18 97.1 477 24.1
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 3.9e-17 94.4 51 88.2
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.9e-16 92.0 93 49.5
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 1.3e-15 89.4 56 78.6
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 6.2e-15 87.0 93 48.4
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 3.1e-14 84.7 425 28.9
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 7.6e-13 80.1 82 47.6
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.8e-12 77.8 163 33.1
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 7.9e-10 70.1 103 50.5
MCO13G545 Micromonas commoda HOM05D003995 ORTHO05D004800 2.3e-09 68.6 106 36.8
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.1e-08 66.2 59 55.9


User provided reference genes

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