Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 0.0e+00 1113.6 651 100.0
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 3.1e-311 1071.2 654 96.9
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.7e-213 746.5 666 67.1
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 3.0e-210 735.7 665 67.5
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 4.0e-210 735.3 662 66.0
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 2.0e-209 733.0 663 66.7
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 9.8e-209 730.7 663 65.3
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 3.7e-208 728.8 666 65.2
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 1.1e-207 727.2 661 67.5
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 1.4e-207 726.9 661 67.2
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 4.1e-207 725.3 662 64.8
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 4.1e-207 725.3 667 65.7
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-206 723.8 658 66.4
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 1.0e-205 720.7 666 64.9
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.0e-205 720.7 668 67.1
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.3e-205 719.5 667 67.0
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.3e-205 719.5 667 64.9
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 5.0e-205 718.4 662 67.4
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 6.5e-205 718.0 668 66.9
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 1.1e-204 717.2 665 66.2
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.1e-204 717.2 666 67.0
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 9.5e-204 714.1 661 66.4
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.8e-203 712.6 668 65.7
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 1.4e-202 710.3 664 64.3
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.0e-202 709.1 668 65.0
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.0e-202 709.1 664 64.5
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 4.0e-202 708.8 660 66.2
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 8.8e-202 707.6 660 66.8
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 1.2e-201 707.2 659 64.8
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 2.6e-201 706.1 660 62.1
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 3.4e-201 705.7 662 62.5
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 1.1e-199 700.7 663 64.4
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.8e-199 699.9 661 64.8
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 2.4e-199 699.5 661 66.4
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 3.1e-199 699.1 661 64.6
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 7.8e-198 694.5 668 66.0
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.0e-197 694.1 660 63.6
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 2.3e-197 693.0 663 64.6
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 5.0e-197 691.8 660 63.5
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 6.6e-197 691.4 668 62.3
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.6e-197 691.0 660 63.5
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 2.8e-195 686.0 670 60.7
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 3.6e-195 685.6 660 63.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.2e-193 680.6 662 66.5
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.2e-193 680.6 662 66.5
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 5.7e-193 678.3 661 60.4
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-192 677.2 660 63.2
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 6.4e-192 674.9 656 62.7
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 7.0e-191 671.4 636 63.8
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.6e-190 670.2 654 63.0
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 1.3e-189 667.2 660 62.4
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 1.1e-188 664.1 662 59.1
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.5e-188 663.7 663 63.3
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 1.5e-188 663.7 671 64.7
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 1.9e-188 663.3 655 60.8
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 8.9e-186 654.4 654 63.0
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 3.4e-185 652.5 657 61.8
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 4.4e-185 652.1 655 60.8
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 1.3e-184 650.6 654 62.8
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 2.9e-184 649.4 654 62.7
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.9e-184 649.4 658 65.7
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 1.1e-183 647.5 661 60.5
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.4e-183 647.1 673 64.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 6.0e-182 641.7 654 62.2
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 3.9e-181 639.0 658 57.9
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 6.6e-181 638.3 659 58.3
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 9.5e-180 634.4 659 63.4
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 1.2e-179 634.0 658 60.6
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 2.1e-179 633.3 662 58.6
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 4.7e-179 632.1 684 59.8
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 4.7e-179 632.1 662 60.3
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 4.7e-179 632.1 674 63.1
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 4.0e-178 629.0 656 59.8
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 5.2e-178 628.6 669 57.8
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 6.8e-178 628.2 659 61.2
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.5e-177 627.1 661 56.3
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 9.9e-177 624.4 656 57.8
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 2.9e-176 622.9 657 57.7
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 2.9e-176 622.9 660 58.6
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 3.7e-176 622.5 659 61.0
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.7e-176 622.5 676 62.3
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 1.9e-175 620.2 659 59.3
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 1.6e-174 617.1 653 57.4
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 8.6e-173 611.3 662 58.5
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.5e-172 610.5 611 60.7
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 2.5e-172 609.8 659 62.4
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.5e-172 609.8 662 59.5
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 2.5e-172 609.8 660 59.4
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 3.3e-172 609.4 662 57.1
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 9.5e-172 607.8 656 54.3
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 1.2e-171 607.4 658 59.1
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 1.2e-171 607.4 658 59.1
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.2e-171 607.4 654 60.2
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.6e-171 607.1 673 56.8
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.4e-170 604.0 665 55.0
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 3.1e-170 602.8 652 56.7
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.2e-170 602.1 666 59.6
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.8e-170 601.7 656 54.0
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 2.0e-169 600.1 656 56.4
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 4.4e-169 599.0 665 56.2
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 4.4e-169 599.0 659 57.2
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.6e-169 598.2 656 53.5
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 7.6e-169 598.2 656 56.6
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 1.3e-168 597.4 657 60.0
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.2e-168 596.7 547 65.3
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.2e-168 596.7 547 65.3
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.8e-168 595.9 656 53.5
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 6.4e-168 595.1 663 55.4
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.9e-167 593.6 628 60.4
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 3.2e-167 592.8 669 58.0
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 3.2e-167 592.8 671 54.4
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 5.4e-167 592.0 542 64.4
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 1.2e-166 590.9 671 54.5
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 1.6e-166 590.5 671 54.4
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.7e-165 587.0 658 56.5
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 2.3e-165 586.6 659 56.4
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.6e-165 584.7 675 57.8
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 3.6e-163 579.3 677 54.9
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 5.2e-162 575.5 661 58.1
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 6.9e-162 575.1 663 56.6
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 1.7e-160 570.5 664 54.5
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.2e-160 570.1 657 54.2
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 3.8e-160 569.3 659 53.0
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 7.1e-159 565.1 656 53.8
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-157 560.8 655 51.5
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 2.3e-157 560.1 668 56.9
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 1.1e-156 557.8 656 52.1
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 4.3e-156 555.8 672 51.9
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 7.3e-156 555.1 656 52.6
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 6.2e-155 552.0 670 51.6
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 8.1e-155 551.6 664 55.7
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 1.8e-154 550.4 658 55.3
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 7.6e-153 545.0 677 50.4
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.9e-152 543.1 649 55.3
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 2.7e-150 536.6 567 58.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.0e-149 534.6 659 50.8
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 1.0e-149 534.6 673 50.1
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 6.7e-149 531.9 687 52.7
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 9.0e-146 521.5 680 50.6
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.1e-143 514.6 683 49.6
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.9e-143 513.8 617 55.1
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.8e-141 507.3 645 56.4
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.5e-140 504.2 659 49.0
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 1.1e-138 498.0 676 49.7
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 5.8e-137 492.3 657 52.1
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 3.0e-133 479.9 542 54.4
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 7.4e-132 475.3 665 50.5
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 9.1e-122 441.8 667 47.7
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 1.5e-121 441.0 610 47.2
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 3.2e-119 433.3 666 44.9
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 5.0e-104 382.9 421 56.5
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 7.2e-103 379.0 400 57.0
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 2.3e-101 374.0 401 58.1
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 2.9e-96 357.1 404 57.9
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 5.5e-95 352.8 656 41.9
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 4.5e-89 333.2 659 41.4
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 5.2e-85 319.7 551 43.6
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 1.6e-73 281.6 540 40.7
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 7.8e-73 279.3 233 69.5
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 3.6e-70 270.4 313 51.8
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.6e-65 255.0 393 42.2
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 6.2e-62 243.0 647 36.8
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 8.9e-61 239.2 634 37.9
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 1.8e-53 214.9 265 48.3
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 9.6e-39 166.0 222 57.7
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.4e-28 131.0 109 59.6
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 3.2e-26 124.4 113 51.3
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 1.8e-24 118.6 140 55.0
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 3.9e-24 117.5 77 80.5
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-20 105.9 78 75.6
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 1.0e-19 102.8 88 67.0
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 1.6e-17 95.5 124 49.2
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 1.0e-16 92.8 132 40.9
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.3e-14 85.9 74 63.5
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 8.2e-14 83.2 484 25.6
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 7.7e-12 76.6 61 50.8
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.0e-11 76.3 46 73.9
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 2.8e-06 58.2 400 25.2


User provided reference genes

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