Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5095 Papaver somniferum HOM05D002658 ORTHO05D003000 4.0e-120 434.9 234 100.0
PSO675G2796 Papaver somniferum HOM05D002658 ORTHO05D003000 1.3e-25 120.9 145 49.7
PSO832G1812 Papaver somniferum HOM05D002658 ORTHO05D003000 2.8e-25 119.8 137 56.9
PSO675G8961 Papaver somniferum HOM05D002658 ORTHO05D003000 2.4e-24 116.7 236 41.9
PSO832G1345 Papaver somniferum HOM05D002658 ORTHO05D003000 4.1e-24 115.9 141 46.1
Ca_26908_v3 Cicer arietinum L. HOM05D002658 ORTHO05D003000 4.5e-15 85.9 219 28.8
Medtr1g036430 Medicago truncatula HOM05D002658 ORTHO05D003000 4.5e-15 85.9 190 28.9
BcaC02g12087 Brassica carinata HOM05D002658 ORTHO05D003000 1.0e-14 84.7 175 34.3
Psat6g098720 Pisum sativum HOM05D002658 ORTHO05D003000 1.3e-14 84.3 183 30.1
TPR.G8252 Trifolium pratense HOM05D002658 ORTHO05D003000 1.3e-14 84.3 187 30.5
TPR.G17465 Trifolium pratense HOM05D002658 ORTHO05D003000 2.3e-14 83.6 187 30.5
Psat2g041480 Pisum sativum HOM05D002658 ORTHO05D003000 2.9e-14 83.2 185 30.3
Lj1g0013048 Lotus japonicus HOM05D002658 ORTHO05D003000 1.9e-13 80.5 185 30.8
PSO478G4222 Papaver somniferum HOM05D002658 ORTHO05D003000 1.9e-13 80.5 249 28.5
BolC4t22419H Brassica oleracea HOM05D002658 ORTHO05D003000 2.5e-13 80.1 238 31.1
C04p08010 Brassica napus HOM05D000160 ORTHO05D003000 4.2e-13 79.3 243 30.9
PSO478G2022 Papaver somniferum HOM05D002658 ORTHO05D003000 2.1e-12 77.0 240 27.1
PSO017G3218 Papaver somniferum HOM05D002658 ORTHO05D003000 3.6e-12 76.3 60 61.7
Psat2g041400 Pisum sativum HOM05D002658 ORTHO05D003000 4.7e-12 75.9 187 28.3
PSO017G5044 Papaver somniferum HOM05D002658 ORTHO05D003000 8.0e-12 75.1 60 61.7
Glyma.09G281700 Glycine max HOM05D002658 ORTHO05D003000 1.4e-11 74.3 228 25.9
PSO063G6725 Papaver somniferum HOM05D002658 ORTHO05D003000 1.4e-11 74.3 60 58.3
PSO017G2881 Papaver somniferum HOM05D002658 ORTHO05D003000 2.3e-11 73.6 241 27.8
Lsat_1_v5_gn_4_65420 Lactuca sativa HOM05D002658 ORTHO05D003000 2.0e-10 70.5 148 31.8
VMungo0251G1674 Vigna mungo HOM05D002658 ORTHO05D003000 2.0e-10 70.5 241 24.9
Duzib248G1296 Durio zibethinus HOM05D002658 ORTHO05D003000 3.4e-10 69.7 97 42.3
FAN17G0854 Fragaria x ananassa HOM05D002658 ORTHO05D003000 9.8e-10 68.2 100 37.0
AL3G31920 Arabidopsis lyrata HOM05D002658 ORTHO05D003000 1.3e-09 67.8 59 55.9
TAR629G2145 Trochodendron aralioides HOM05D002658 ORTHO05D003000 1.7e-09 67.4 100 38.0
TAR629G3397 Trochodendron aralioides HOM05D002658 ORTHO05D003000 1.7e-09 67.4 100 38.0
EL10Ac9g22941 Beta vulgaris HOM05D002658 ORTHO05D003000 2.2e-09 67.0 183 29.0
Glyma.12G027400 Glycine max HOM05D002658 ORTHO05D003000 2.2e-09 67.0 115 36.5
Duzib132G0973 Durio zibethinus HOM05D002658 ORTHO05D003000 4.9e-09 65.9 130 34.6
Glyma.20G004000 Glycine max HOM05D002658 ORTHO05D003000 4.9e-09 65.9 202 26.2
Peaxi162Scf01412g00004 Petunia axillaris HOM05D002658 ORTHO05D003000 6.3e-09 65.5 180 28.3
Gohir.D01G014000 Gossypium hirsutum HOM05D002658 ORTHO05D003000 8.3e-09 65.1 186 30.6
Nn3g18649 Nelumbo nucifera HOM05D002658 ORTHO05D003000 8.3e-09 65.1 75 44.0
AT3G18610 Arabidopsis thaliana HOM05D002658 ORTHO05D003000 1.1e-08 64.7 58 55.2
Gohir.D13G061900 Gossypium hirsutum HOM05D002658 ORTHO05D003000 1.1e-08 64.7 130 33.1
Sp1g35830 Schrenkiella parvula HOM05D002658 ORTHO05D003000 1.1e-08 64.7 111 35.1
CDE01G0413 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 1.4e-08 64.3 106 37.7
PSO063G2038 Papaver somniferum HOM05D002658 ORTHO05D003000 1.4e-08 64.3 59 52.5
PSO782G1034 Papaver somniferum HOM05D002658 ORTHO05D003000 1.4e-08 64.3 59 52.5
Thecc.02G160500 Theobroma cacao HOM05D002658 ORTHO05D003000 1.4e-08 64.3 129 33.3
Ah.01g012180 Amaranthus hybridus HOM05D002658 ORTHO05D003000 1.8e-08 63.9 182 29.7
Gorai.013G070400 Gossypium raimondii HOM05D002658 ORTHO05D003000 1.8e-08 63.9 130 33.1
Sc06g0007980 Simmondsia chinensis HOM05D002658 ORTHO05D003000 1.8e-08 63.9 75 44.0
Eucgr.G02571 Eucalyptus grandis HOM05D002658 ORTHO05D003000 2.4e-08 63.5 184 27.7
Aqoxy3G04264 Aquilegia oxysepala HOM05D002658 ORTHO05D003000 3.1e-08 63.2 111 34.2
Phvul.011G030600 Phaseolus vulgaris HOM05D002658 ORTHO05D003000 3.1e-08 63.2 103 38.8
PGR142G2595 Punica granatum HOM05D002658 ORTHO05D003000 3.1e-08 63.2 106 34.9
SalBow2G3648 Salvia bowleyana HOM05D002658 ORTHO05D003000 3.1e-08 63.2 115 35.7
Gohir.A13G060000 Gossypium hirsutum HOM05D002658 ORTHO05D003000 4.1e-08 62.8 130 33.1
Gorai.008G149100 Gossypium raimondii HOM05D002658 ORTHO05D003000 4.1e-08 62.8 130 36.9
Os04g0620700 Oryza sativa ssp. japonica HOM05D002658 ORTHO05D003000 4.1e-08 62.8 115 33.0
A01p10210 Brassica napus HOM05D007723 ORTHO05D019955 5.4e-08 62.4 145 32.4
BraA01t00966Z Brassica rapa HOM05D007723 ORTHO05D019955 5.4e-08 62.4 145 32.4
Gohir.A01G012800 Gossypium hirsutum HOM05D002658 ORTHO05D003000 5.4e-08 62.4 75 44.0
Nitab4.5_0002873g0020 Nicotiana tabacum HOM05D002658 ORTHO05D003000 5.4e-08 62.4 203 25.1
Phvul.003G282900 Phaseolus vulgaris HOM05D002658 ORTHO05D003000 5.4e-08 62.4 202 24.8
SMO228G0128 Selaginella moellendorffii HOM05D002658 ORTHO05D003000 5.4e-08 62.4 163 29.4
arahy.Tifrunner.gnm1.ann1.L3BXHZ Arachis hypogaea HOM05D002658 ORTHO05D003000 7.0e-08 62.0 58 51.7
CDE05G1740 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 7.0e-08 62.0 128 35.9
Peaxi162Scf00363g00520 Petunia axillaris HOM05D002658 ORTHO05D003000 7.0e-08 62.0 182 26.4
THA.LOC104810678 Tarenaya hassleriana HOM05D002658 ORTHO05D003000 7.0e-08 62.0 60 48.3
CSS0029052 Camellia sinensis var. sinensis HOM05D002658 ORTHO05D003000 9.2e-08 61.6 105 35.2
Gorai.002G015800 Gossypium raimondii HOM05D002658 ORTHO05D003000 9.2e-08 61.6 75 44.0
HanXRQChr06g0171481 Helianthus annuus HOM05D002658 ORTHO05D003000 9.2e-08 61.6 183 27.9
MD13G1006400 Malus domestica HOM05D002658 ORTHO05D003000 9.2e-08 61.6 183 29.5
BraA05t21942Z Brassica rapa HOM05D002658 ORTHO05D003000 1.2e-07 61.2 152 30.3
Duzib052G0136 Durio zibethinus HOM05D002658 ORTHO05D003000 1.2e-07 61.2 130 33.1
Glyma.11G101500 Glycine max HOM05D002658 ORTHO05D003000 1.2e-07 61.2 97 38.1
Hma1.2p1_1683F.1_g297380 Hydrangea macrophylla HOM05D002658 ORTHO05D003000 1.2e-07 61.2 101 36.6
MBI18_g11231_MAGBIO Magnolia biondii HOM05D002658 ORTHO05D003000 1.2e-07 61.2 106 35.8
VMungo1127G1795 Vigna mungo HOM05D002658 ORTHO05D003000 1.2e-07 61.2 127 32.3
Thhalv10019472m.g Eutrema salsugineum HOM05D007723 ORTHO05D010327 1.6e-07 60.8 137 36.5
THA.LOC104820414 Tarenaya hassleriana HOM05D002658 ORTHO05D003000 1.6e-07 60.8 60 48.3
Actinidia04307 Actinidia chinensis HOM05D002658 ORTHO05D003000 2.0e-07 60.5 100 35.0
A05p31000 Brassica napus HOM05D002658 ORTHO05D003000 2.0e-07 60.5 105 35.2
Lj6C719G16 Lonicera japonica HOM05D002658 ORTHO05D003000 2.0e-07 60.5 92 40.2
MBI02_g07021_MAGBIO Magnolia biondii HOM05D002658 ORTHO05D003000 2.0e-07 60.5 78 41.0
BolC2t07291H Brassica oleracea HOM05D007723 ORTHO05D019955 2.7e-07 60.1 145 31.0
BolC5t32244H Brassica oleracea HOM05D002658 ORTHO05D003000 2.7e-07 60.1 60 51.7
CiPaw.06G060000 Carya illinoinensis HOM05D002658 ORTHO05D003000 2.7e-07 60.1 198 26.3
Gohir.D12G137566 Gossypium hirsutum HOM05D002658 ORTHO05D003000 2.7e-07 60.1 130 36.2
CANSAT56G3384 Cannabis sativa HOM05D002658 ORTHO05D003000 3.5e-07 59.7 185 27.0
Carub.0001s3809 Capsella rubella HOM05D002658 ORTHO05D003000 3.5e-07 59.7 101 36.6
Haze_11751 Corylus avellana HOM05D002658 ORTHO05D003000 3.5e-07 59.7 98 35.7
DCAR_002573 Daucus carota HOM05D002658 ORTHO05D003000 3.5e-07 59.7 97 37.1
Thhalv10020940m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 3.5e-07 59.7 83 41.0
AT1G48920 Arabidopsis thaliana HOM05D002658 ORTHO05D003000 4.5e-07 59.3 188 27.1
Dinv17606 Davidia involucrata HOM05D002658 ORTHO05D003000 4.5e-07 59.3 100 35.0
Zm00001eb046260 Zea mays HOM05D002658 ORTHO05D003000 4.5e-07 59.3 102 35.3
BcaB02g11292 Brassica carinata HOM05D002658 ORTHO05D003000 5.9e-07 58.9 112 32.1
BcaC05g27545 Brassica carinata HOM05D002658 ORTHO05D003000 5.9e-07 58.9 60 50.0
A05p20830 Brassica napus HOM05D002658 ORTHO05D003000 5.9e-07 58.9 112 32.1
C05p35300 Brassica napus HOM05D002658 ORTHO05D003000 5.9e-07 58.9 60 50.0
BraA05t20989Z Brassica rapa HOM05D002658 ORTHO05D003000 5.9e-07 58.9 112 32.1
ATR1098G121 Amborella trichopoda HOM05D002658 ORTHO05D003000 7.8e-07 58.5 127 30.7
BcaC05g28592 Brassica carinata HOM05D002658 ORTHO05D003000 7.8e-07 58.5 82 37.8
CDE12G0003 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 7.8e-07 58.5 130 33.8
AUR62022513 Chenopodium quinoa HOM05D006053 ORTHO05D008381 7.8e-07 58.5 151 29.1
COL.COLO4_19606 Corchorus olitorius HOM05D002658 ORTHO05D003000 7.8e-07 58.5 130 33.8
ECA246G1081 Erigeron canadensis HOM05D002658 ORTHO05D003000 7.8e-07 58.5 75 40.0
MD16G1001600 Malus domestica HOM05D002658 ORTHO05D003000 7.8e-07 58.5 161 28.6
Psat7g173280 Pisum sativum HOM05D002658 ORTHO05D003000 7.8e-07 58.5 96 37.5
Atru.chr11.1170 Acer truncatum HOM05D002658 ORTHO05D003000 1.0e-06 58.2 92 39.1
AL1G55750 Arabidopsis lyrata HOM05D002658 ORTHO05D003000 1.0e-06 58.2 101 35.6
AL7G48800 Arabidopsis lyrata HOM05D007723 ORTHO05D010327 1.0e-06 58.2 150 30.0
BraA08t32458Z Brassica rapa HOM05D002658 ORTHO05D003000 1.0e-06 58.2 78 41.0
FvH4_4g36861 Fragaria vesca HOM05D002658 ORTHO05D003000 1.0e-06 58.2 59 49.2
FAN12G1156 Fragaria x ananassa HOM05D002658 ORTHO05D003000 1.0e-06 58.2 59 49.2
HanXRQChr01g0028031 Helianthus annuus HOM05D002658 ORTHO05D003000 1.0e-06 58.2 228 25.9
Oeu027908.2 Olea europaea HOM05D002658 ORTHO05D003000 1.0e-06 58.2 174 27.6
GSVIVG01012042001 Vitis vinifera HOM05D002658 ORTHO05D003000 1.0e-06 58.2 60 51.7
C08p04580 Brassica napus HOM05D002658 ORTHO05D003000 1.3e-06 57.8 97 37.1
BolC8t47262H Brassica oleracea HOM05D002658 ORTHO05D003000 1.3e-06 57.8 97 37.1
Lalb_Chr01g0001461 Lupinus albus HOM05D002658 ORTHO05D003000 1.3e-06 57.8 75 42.7
Solyc02g014310.4 Solanum lycopersicum HOM05D002658 ORTHO05D003000 1.3e-06 57.8 158 27.2
Sopen02g003410 Solanum pennellii HOM05D002658 ORTHO05D003000 1.3e-06 57.8 158 27.2
CARHR038910 Cardamine hirsuta HOM05D002658 ORTHO05D003000 1.7e-06 57.4 189 26.5
Hund08548 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.7e-06 57.4 55 50.9
AL7G49150 Arabidopsis lyrata HOM05D007723 ORTHO05D010327 2.3e-06 57.0 150 30.0
BcaC05g28595 Brassica carinata HOM05D002658 ORTHO05D003000 2.3e-06 57.0 105 33.3
C05p46990 Brassica napus HOM05D002658 ORTHO05D003000 2.3e-06 57.0 105 33.3
BolC5t33428H Brassica oleracea HOM05D002658 ORTHO05D003000 2.3e-06 57.0 105 33.3
Oeu028417.1 Olea europaea HOM05D002658 ORTHO05D003000 2.3e-06 57.0 161 30.4
vmacro10896 Vaccinium macrocarpon HOM05D002658 ORTHO05D003000 2.3e-06 57.0 81 38.3
A08p04310 Brassica napus HOM05D002658 ORTHO05D003000 2.9e-06 56.6 97 36.1
CDE02G0625 Ceratophyllum demersum HOM05D002658 ORTHO05D003000 2.9e-06 56.6 68 42.6
AUR62038385 Chenopodium quinoa HOM05D006053 ORTHO05D008381 2.9e-06 56.6 148 29.7
AUR62038388 Chenopodium quinoa HOM05D006053 ORTHO05D008381 2.9e-06 56.6 148 29.7
Migut.E00700 Erythranthe guttata HOM05D002658 ORTHO05D003000 2.9e-06 56.6 98 35.7
Medtr4g074930 Medicago truncatula HOM05D002658 ORTHO05D003000 2.9e-06 56.6 55 47.3
Prupe.1G346800 Prunus persica HOM05D002658 ORTHO05D003000 2.9e-06 56.6 61 45.9
AL7G48270 Arabidopsis lyrata HOM05D007723 ORTHO05D010327 3.8e-06 56.2 145 33.1
BcaB07g33701 Brassica carinata HOM05D002658 ORTHO05D003000 3.8e-06 56.2 58 48.3
Carub.0003s1839 Capsella rubella HOM05D002658 ORTHO05D003000 3.8e-06 56.2 75 40.0
Nitab4.5_0000739g0010 Nicotiana tabacum HOM05D002658 ORTHO05D003000 3.8e-06 56.2 111 33.3
QL03p044151 Quercus lobata HOM05D002658 ORTHO05D003000 5.0e-06 55.8 55 52.7
PGSC0003DMG400001191 Solanum tuberosum HOM05D002658 ORTHO05D003000 5.0e-06 55.8 60 45.0
DCAR_002571 Daucus carota HOM05D002658 ORTHO05D003000 6.6e-06 55.5 183 27.9
Thhalv10011361m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 6.6e-06 55.5 78 37.2
FAN04G0065 Fragaria x ananassa HOM05D002658 ORTHO05D003000 6.6e-06 55.5 100 33.0
FAN08G3096 Fragaria x ananassa HOM05D002658 ORTHO05D003000 6.6e-06 55.5 61 44.3
Thhalv10027521m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 8.6e-06 55.1 81 37.0
Lj3g0010214 Lotus japonicus HOM05D002658 ORTHO05D003000 8.6e-06 55.1 192 26.0
Rhsim09G0074900 Rhododendron simsii HOM05D002658 ORTHO05D003000 8.6e-06 55.1 56 48.2
Sed0002082 Sechium edule HOM05D002658 ORTHO05D003000 8.6e-06 55.1 56 50.0
SEGI_38671 Sequoiadendron giganteum HOM05D006053 ORTHO05D008381 8.6e-06 55.1 202 26.7


User provided reference genes

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