Gene: AT3G18610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18610
  • Transcript Identifier AT3G18610.2
  • Gene Type Coding gene
  • Location Chr3 : 6404270-6407822 : negative

Gene Family Information

  • ID HOM05D002658
  • #Genes/#Species 258/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18610.2
  • symbol NUC-L2
  • Alias ATNUC-L2,nucleolin like 2,NUC2,nucleolin 2,PARLL1,PARALLEL1-LIKE 1
  • uniprot Q1PEP5

Descriptions

  • Description nucleolin like 2
  • Computational description nucleolin like 2 (NUC-L2); FUNCTIONS IN: nucleotide binding, nucleic acid binding; EXPRESSED IN: egg cell, cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 220619 Blast hits to 110675 proteins in 3421 species: Archae - 647; Bacteria - 30556; Metazoa - 92066; Fungi - 36057; Plants - 14337; Viruses - 1241; Other Eukaryotes - 45715 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000183
IGI
Gene OntologyrDNA heterochromatin assembly1
GO:0006364
IEA
GOA DatabaserRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031491
IDA
Gene Ontologynucleosome binding1
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IBA
Gene OntologyRNA binding2
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IDA
Gene Ontologynucleolus3
GO:1990904
IBA
Gene Ontologyribonucleoprotein complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034349 NUCL, RNA recognition motif 1
IPR034350 NUCL, RNA recognition motif 2
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
17.1.1.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA chromatin transcription factor (NCL)