Gene: Os04g0620700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0620700
  • Transcript Identifier Os04t0620700-01
  • Gene Type Coding gene
  • Location chr04 : 31545907-31550971 : positive

Gene Family Information

  • ID HOM05D002658
  • #Genes/#Species 258/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0620700-01
  • MSU-ID LOC_Os04g52960.1
  • symbol OsNUC1
  • symbol OsNUC1-L
  • symbol OsNUC1-S
  • name nucleolin 1
  • name NUCLEOLIN1-S
  • uniprot Q7XTT4

Descriptions

  • Description Nucleolin-like protein, Salt stress response
  • Description Short isoform of nucleolin, Salt-stress tolerance, Photosynthetic enhancement
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080057
ISO
PLAZA Integrative Orthologysepal vascular tissue pattern formation AT1G48920
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT1G48920
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT1G48920
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT1G48920
GO:0000183
ISO
PLAZA Integrative OrthologyrDNA heterochromatin assembly AT3G18610
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G48920
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G48920
GO:0000478
ISO
PLAZA Integrative Orthologyendonucleolytic cleavage involved in rRNA processing AT1G48920
GO:0042254
ISO
PLAZA Integrative Orthologyribosome biogenesis AT1G48920
GO:0080056
ISO
PLAZA Integrative Orthologypetal vascular tissue pattern formation AT1G48920
GO:0006364
IEA
GOA DatabaserRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G48920
GO:0031491
ISO
PLAZA Integrative Orthologynucleosome binding AT3G18610
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G48920
GO:0005730
IEA
GOA Databasenucleolus
GO:1990904
IBA
GOA Databaseribonucleoprotein complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR034349 NUCL, RNA recognition motif 1
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
17.1.1.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA transcription.rDNA chromatin transcription factor (NCL)