Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 4.5e-143 512.7 261 100.0
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 9.4e-141 505.0 261 98.5
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 9.8e-106 388.7 265 75.1
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 4.9e-105 386.3 264 76.1
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 5.0e-102 376.3 269 71.4
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 8.6e-102 375.6 260 71.5
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 8.0e-100 369.0 259 71.8
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 8.0e-100 369.0 259 71.8
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 2.9e-97 360.5 263 70.3
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 3.7e-97 360.1 256 71.5
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 1.1e-96 358.6 263 70.7
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 3.5e-95 353.6 256 70.7
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 4.6e-95 353.2 262 68.7
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 7.8e-95 352.4 277 65.0
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 1.3e-94 351.7 272 66.2
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 1.3e-94 351.7 277 65.3
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 3.9e-94 350.1 254 68.1
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 5.0e-94 349.7 262 68.3
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 3.3e-93 347.1 262 67.6
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 5.6e-93 346.3 262 67.9
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 9.5e-93 345.5 259 68.0
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 1.2e-92 345.1 262 67.9
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 2.1e-92 344.4 262 68.3
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 2.1e-92 344.4 260 68.1
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 2.8e-92 344.0 256 67.6
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 2.8e-92 344.0 256 67.6
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 8.0e-92 342.4 261 65.5
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 8.0e-92 342.4 251 69.3
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.3e-91 340.9 256 66.0
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 4.0e-91 340.1 260 67.7
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 5.2e-91 339.7 255 67.8
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 5.2e-91 339.7 259 65.6
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 8.9e-91 339.0 256 65.6
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 2.6e-90 337.4 258 66.7
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 1.3e-89 335.1 255 66.3
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 1.3e-89 335.1 247 68.8
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 1.7e-89 334.7 259 65.6
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 2.9e-89 334.0 257 64.6
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 2.9e-89 334.0 259 64.1
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 4.9e-89 333.2 259 64.1
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 4.9e-89 333.2 260 64.6
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 4.9e-89 333.2 260 64.6
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 6.4e-89 332.8 256 64.8
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 8.3e-89 332.4 262 64.9
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 1.4e-88 331.6 263 63.9
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 2.4e-88 330.9 241 70.5
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 3.2e-88 330.5 253 66.0
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.4e-88 329.7 244 68.4
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 7.0e-88 329.3 257 64.6
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 1.6e-87 328.2 254 64.2
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 3.5e-87 327.0 261 62.5
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 6.0e-87 326.2 252 65.5
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 7.8e-87 325.9 242 68.6
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 7.8e-87 325.9 265 62.6
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 1.7e-86 324.7 260 63.1
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 1.7e-86 324.7 259 64.1
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 3.0e-86 323.9 251 64.1
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 3.0e-86 323.9 253 66.0
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 3.0e-86 323.9 252 65.5
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 6.6e-86 322.8 258 62.8
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 1.1e-85 322.0 243 67.5
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 2.5e-85 320.9 243 66.7
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 3.3e-85 320.5 236 69.5
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 7.3e-85 319.3 239 67.8
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 9.5e-85 318.9 239 67.8
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 1.6e-84 318.2 242 65.7
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 3.6e-84 317.0 243 67.5
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 1.8e-83 314.7 241 66.8
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 3.1e-83 313.9 265 61.9
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 1.7e-81 308.1 242 65.7
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 1.4e-80 305.1 245 62.9
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 1.9e-80 304.7 236 64.8
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 2.4e-80 304.3 243 63.8
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 3.2e-80 303.9 241 63.9
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 4.1e-80 303.5 244 61.9
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 4.1e-80 303.5 244 61.9
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 4.1e-80 303.5 244 61.9
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 4.1e-80 303.5 263 60.5
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 4.1e-80 303.5 242 62.8
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 5.4e-80 303.1 239 66.1
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 9.2e-80 302.4 244 61.9
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 9.2e-80 302.4 244 61.9
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 9.2e-80 302.4 263 60.1
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 9.2e-80 302.4 254 59.4
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 2.1e-79 301.2 244 62.7
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 2.7e-79 300.8 244 61.9
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 2.7e-79 300.8 244 62.7
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 2.3e-78 297.7 259 60.6
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 4.3e-77 293.5 243 61.3
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 3.6e-76 290.4 248 61.7
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 4.7e-76 290.0 241 60.2
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 1.1e-75 288.9 236 61.0
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 1.4e-75 288.5 263 58.6
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 1.4e-75 288.5 241 61.0
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.2e-74 285.4 259 57.9
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 2.6e-74 284.3 257 57.2
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 7.1e-72 276.2 263 53.6
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 3.5e-71 273.9 246 61.0
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 8.6e-70 269.2 176 74.4
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 9.3e-56 222.6 171 64.3
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 4.8e-52 210.3 249 47.0
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 1.2e-50 205.7 169 63.9
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 2.2e-49 201.4 263 48.3
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 2.2e-41 174.9 215 44.7
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 3.7e-36 157.5 220 39.5
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 1.5e-34 152.1 187 47.1
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 8.8e-30 136.3 262 35.1
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 4.5e-26 124.0 222 33.3
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 1.0e-25 122.9 253 34.0
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 4.7e-23 114.0 173 37.6
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 1.7e-20 105.5 79 64.6
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 2.0e-13 82.0 251 27.5
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 5.9e-10 70.5 45 75.6
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 5.9e-10 70.5 45 75.6
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.0e-09 69.7 43 79.1
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.3e-09 69.3 42 76.2
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 2.2e-09 68.6 44 72.7
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.5e-08 65.1 87 39.1
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.5e-08 65.1 87 39.1
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 4.2e-08 64.3 53 66.0
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 6.1e-07 60.5 37 78.4
BcaNung05253 Brassica carinata HOM05D006705 ORTHO05D008179 8.0e-07 60.1 44 61.4
AUR62037373 Chenopodium quinoa HOM05D002479 ORTHO05D002675 1.0e-06 59.7 105 34.3
AUR62038945 Chenopodium quinoa HOM05D002479 ORTHO05D002675 1.0e-06 59.7 105 34.3
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 1.8e-06 58.9 70 38.6
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 2.3e-06 58.5 89 41.6
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 3.0e-06 58.2 68 39.7
EL10Ac9g20676 Beta vulgaris HOM05D002479 ORTHO05D002675 5.2e-06 57.4 105 33.3
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 5.2e-06 57.4 65 43.1
Cpa.g.sc81.104 Carica papaya HOM05D000001 ORTHO05D009726 6.7e-06 57.0 169 26.0
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 6.7e-06 57.0 68 45.6
Ah.14g085650 Amaranthus hybridus HOM05D000001 ORTHO05D009745 8.8e-06 56.6 152 30.3


User provided reference genes

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