Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 4.3e-205 718.8 729 100.0
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 6.7e-174 615.1 731 85.8
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.1e-74 284.6 619 75.4
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 2.6e-48 198.0 626 68.5
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 2.5e-43 181.4 622 68.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 6.3e-39 166.8 184 45.1
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 6.3e-39 166.8 623 68.4
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.2e-39 166.4 181 44.8
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.9e-37 160.2 181 43.6
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 5.9e-37 160.2 626 66.0
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.2e-36 158.3 173 45.7
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.5e-35 155.6 173 48.0
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 2.5e-35 154.8 153 49.7
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 4.2e-35 154.1 623 67.1
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 4.2e-35 154.1 152 50.7
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.2e-34 152.5 634 64.4
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.7e-34 151.4 628 62.9
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 3.6e-34 151.0 150 49.3
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.6e-34 151.0 152 49.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 3.0e-33 147.9 623 67.6
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 8.8e-33 146.4 155 49.0
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.2e-32 146.0 184 39.1
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 9.7e-32 142.9 106 64.2
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 9.7e-32 142.9 106 64.2
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.7e-29 134.8 128 50.0
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.5e-29 134.0 150 42.0
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 4.5e-29 134.0 99 63.6
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.2e-28 131.7 179 39.7
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 3.8e-28 131.0 114 56.1
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.8e-28 131.0 151 45.0
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 8.5e-28 129.8 133 49.6
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.1e-27 129.4 141 46.8
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.5e-27 128.3 113 54.9
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 2.5e-27 128.3 101 61.4
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 3.2e-27 127.9 92 63.0
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.2e-27 127.5 103 59.2
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 5.5e-27 127.1 110 56.4
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 9.4e-27 126.3 92 65.2
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.2e-26 125.9 92 65.2
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 1.2e-26 125.9 186 37.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.6e-26 125.6 92 63.0
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.6e-26 125.6 143 46.2
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 4.7e-26 124.0 110 56.4
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 4.7e-26 124.0 110 57.3
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.1e-26 123.6 144 47.2
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 8.0e-26 123.2 126 51.6
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 1.4e-25 122.5 110 57.3
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.4e-25 122.5 116 53.4
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.4e-25 122.5 129 50.4
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.8e-25 122.1 92 62.0
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.8e-25 122.1 124 53.2
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.8e-25 122.1 129 48.1
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.8e-25 122.1 113 53.1
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.8e-25 122.1 113 53.1
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 4.0e-25 120.9 93 62.4
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 5.2e-25 120.6 92 57.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 8.8e-25 119.8 91 61.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.2e-24 119.4 133 45.1
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.5e-24 119.0 111 54.1
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 2.0e-24 118.6 106 53.8
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 3.4e-24 117.9 110 51.8
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 3.4e-24 117.9 110 51.8
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 4.4e-24 117.5 97 56.7
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 4.4e-24 117.5 111 52.3
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 5.7e-24 117.1 118 47.5
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 5.7e-24 117.1 108 52.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 7.5e-24 116.7 107 57.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 7.5e-24 116.7 113 54.9
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 7.5e-24 116.7 93 58.1
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 7.5e-24 116.7 97 57.7
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 9.8e-24 116.3 104 54.8
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 1.3e-23 115.9 111 52.3
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 1.3e-23 115.9 97 59.8
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.3e-23 115.9 109 53.2
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.3e-23 115.9 118 50.8
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 1.7e-23 115.5 105 53.3
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.7e-23 115.5 108 53.7
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 1.7e-23 115.5 109 51.4
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.7e-23 115.5 110 50.0
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.7e-23 115.5 109 51.4
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.7e-23 115.5 108 51.9
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.7e-23 115.5 109 50.5
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.7e-23 115.5 129 47.3
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 2.8e-23 114.8 110 54.5
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.8e-23 114.8 105 52.4
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 2.8e-23 114.8 93 57.0
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 3.7e-23 114.4 109 50.5
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 3.7e-23 114.4 109 50.5
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 6.3e-23 113.6 113 52.2
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 8.3e-23 113.2 113 47.8
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.1e-22 112.8 146 41.8
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 1.8e-22 112.1 99 56.6
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 3.1e-22 111.3 82 64.6
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 7.0e-22 110.2 108 48.1
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 9.1e-22 109.8 110 52.7
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 1.2e-21 109.4 82 62.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.6e-21 109.0 110 49.1
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 2.0e-21 108.6 89 55.1
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 2.7e-21 108.2 110 49.1
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.7e-21 108.2 110 49.1
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 7.7e-21 106.7 93 58.1
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.2e-20 105.1 167 35.9
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 2.2e-20 105.1 120 43.3
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 4.2e-19 100.9 180 33.9
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 2.1e-18 98.6 81 54.3
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 4.0e-17 94.4 101 52.5
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 4.0e-17 94.4 101 52.5
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 5.2e-17 94.0 78 57.7
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 4.1e-14 84.3 73 53.4
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.5e-13 81.3 104 35.6
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 5.9e-13 80.5 88 47.7
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 3.8e-12 77.8 101 47.5
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.1e-10 70.5 61 59.0
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 8.9e-09 66.6 159 26.4
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 2.0e-08 65.5 67 46.3
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.6e-08 65.1 150 26.7
HanXRQChr16g0518411 Helianthus annuus HOM05D002453 ORTHO05D002107 2.6e-08 65.1 141 29.1
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 2.6e-08 65.1 214 23.4
Cc07_g09260 Coffea canephora HOM05D000891 ORTHO05D000761 3.4e-08 64.7 209 26.8
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 5.7e-08 63.9 124 29.8
Sopen12g014610 Solanum pennellii HOM05D002453 ORTHO05D002107 9.8e-08 63.2 131 26.0
Actinidia21102 Actinidia chinensis HOM05D007202 ORTHO05D009125 1.3e-07 62.8 213 29.6
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 1.7e-07 62.4 174 25.3
Cpa.g.sc8.119 Carica papaya HOM05D008810 ORTHO05D010971 2.2e-07 62.0 210 26.2
PGSC0003DMG400040010 Solanum tuberosum HOM05D000891 ORTHO05D000761 2.2e-07 62.0 143 28.0
Actinidia09797 Actinidia chinensis HOM05D005764 ORTHO05D006600 2.9e-07 61.6 124 30.6
CAN.G53.43 Capsicum annuum HOM05D000891 ORTHO05D000761 2.9e-07 61.6 207 25.1
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 2.9e-07 61.6 181 28.2
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 3.7e-07 61.2 179 26.3
Glyma.01G016100 Glycine max HOM05D007893 ORTHO05D010042 3.7e-07 61.2 157 24.8
PGSC0003DMG400015467 Solanum tuberosum HOM05D000891 ORTHO05D000761 3.7e-07 61.2 207 24.6
Solyc02g062910.3 Solanum lycopersicum HOM05D000891 ORTHO05D000761 4.9e-07 60.8 207 24.2
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 6.4e-07 60.5 235 24.7
Sopen02g013930 Solanum pennellii HOM05D000891 ORTHO05D000761 6.4e-07 60.5 207 24.2
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 8.3e-07 60.1 196 22.4
HanXRQChr14g0453291 Helianthus annuus HOM05D006596 ORTHO05D008497 8.3e-07 60.1 196 24.5
BcaC08g46890 Brassica carinata HOM05D002453 ORTHO05D002107 1.1e-06 59.7 107 30.8
C06p48690 Brassica napus HOM05D002453 ORTHO05D002107 1.1e-06 59.7 107 30.8
Duzib093G1875 Durio zibethinus HOM05D000855 ORTHO05D008530 1.1e-06 59.7 181 27.1
Sc07g0000240 Simmondsia chinensis HOM05D000891 ORTHO05D000761 1.1e-06 59.7 144 27.8
FAN12G3533 Fragaria x ananassa HOM05D007202 ORTHO05D009125 1.4e-06 59.3 215 29.3
Nitab4.5_0000026g0050 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.4e-06 59.3 138 24.6
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 1.4e-06 59.3 189 26.5
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.4e-06 59.3 154 22.7
ATR0829G190 Amborella trichopoda HOM05D007291 ORTHO05D009038 1.8e-06 58.9 192 22.4
FAN12G2678 Fragaria x ananassa HOM05D007202 ORTHO05D009125 1.8e-06 58.9 215 29.3
Nitab4.5_0005983g0010 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.8e-06 58.9 138 24.6
FAN07G0522 Fragaria x ananassa HOM05D007202 ORTHO05D009125 2.4e-06 58.5 131 31.3
SHI14130 Sapria himalayana HOM05D002453 ORTHO05D002107 2.4e-06 58.5 142 24.6
GSVIVG01012782001 Vitis vinifera HOM05D003039 ORTHO05D008410 2.4e-06 58.5 155 27.1
Aqoxy7G02983 Aquilegia oxysepala HOM05D003039 ORTHO05D008410 3.2e-06 58.2 107 32.7
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 3.2e-06 58.2 181 27.1
Thhalv10003177m.g Eutrema salsugineum HOM05D006218 ORTHO05D007338 3.2e-06 58.2 219 25.6
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 3.2e-06 58.2 137 29.9
BraA10t44884Z Brassica rapa HOM05D007202 ORTHO05D009125 4.1e-06 57.8 218 26.6
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 5.4e-06 57.4 181 24.3
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 5.4e-06 57.4 141 27.0
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 5.4e-06 57.4 131 26.0
Atru.chr9.2259 Acer truncatum HOM05D002453 ORTHO05D002107 7.0e-06 57.0 107 31.8
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 7.0e-06 57.0 188 24.5
FvH4_4g11723 Fragaria vesca HOM05D007202 ORTHO05D009125 7.0e-06 57.0 215 28.8
Nitab4.5_0010112g0050 Nicotiana tabacum HOM05D003039 ORTHO05D008410 7.0e-06 57.0 229 24.0
SEGI_26115 Sequoiadendron giganteum HOM05D006819 ORTHO05D008763 7.0e-06 57.0 140 30.7
SGA_v2.0_scaffold48G17965 Striga asiatica HOM05D003039 ORTHO05D008410 7.0e-06 57.0 159 28.3
Carub.0006s0720 Capsella rubella HOM05D007202 ORTHO05D009125 9.2e-06 56.6 218 25.7
FAN09G2418 Fragaria x ananassa HOM05D000855 ORTHO05D008530 9.2e-06 56.6 181 24.3
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 9.2e-06 56.6 181 24.3
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 9.2e-06 56.6 179 24.0
Rhsim08G0188000 Rhododendron simsii HOM05D007173 ORTHO05D009151 9.2e-06 56.6 211 25.6


User provided reference genes

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