Gene: SGA_v2.0_scaffold48G17965

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold48G17965
  • Transcript Identifier SGA_v2.0_scaffold48T17965
  • Gene Type Coding gene
  • Location scaffold48 : 1359956-1361473 : positive

Gene Family Information

  • ID HOM05D003039
  • #Genes/#Species 226/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G61360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G61360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.4.2.6 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.splicing factor (SLO3)