Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 9.1e-232 806.6 423 100.0
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 7.7e-231 803.5 423 99.8
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.4e-211 739.6 423 90.3
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 5.7e-210 734.2 422 89.6
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 7.5e-210 733.8 422 88.9
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 8.3e-209 730.3 423 89.1
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 3.1e-208 728.4 423 88.9
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 5.4e-208 727.6 420 89.3
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 9.2e-208 726.9 423 87.9
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 2.3e-206 722.2 422 88.4
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 2.3e-206 722.2 420 88.6
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 3.8e-206 721.5 419 89.0
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 5.0e-206 721.1 419 89.3
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 1.5e-205 719.5 420 87.6
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 1.9e-205 719.2 423 87.7
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.5e-205 718.8 420 88.6
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 3.3e-205 718.4 420 87.9
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 5.6e-205 717.6 419 88.1
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 5.6e-205 717.6 423 86.5
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 1.2e-204 716.5 422 87.7
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 1.6e-204 716.1 420 87.4
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 1.6e-204 716.1 420 88.1
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 1.6e-204 716.1 422 88.9
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 1.6e-204 716.1 419 87.4
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 1.6e-204 716.1 420 87.6
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 2.1e-204 715.7 422 87.4
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 2.1e-204 715.7 423 86.5
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.8e-204 715.3 422 86.5
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 2.8e-204 715.3 422 88.4
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 2.8e-204 715.3 422 87.0
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 3.6e-204 714.9 423 86.8
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 3.6e-204 714.9 420 87.6
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 3.6e-204 714.9 419 87.6
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 6.1e-204 714.1 422 87.4
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 8.0e-204 713.8 420 87.4
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 8.0e-204 713.8 422 86.0
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.0e-203 713.4 422 86.0
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 1.4e-203 713.0 422 88.4
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 1.4e-203 713.0 422 86.7
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 1.8e-203 712.6 421 86.7
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 2.3e-203 712.2 423 86.8
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 2.3e-203 712.2 422 87.2
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 3.0e-203 711.8 423 85.8
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 3.0e-203 711.8 422 86.3
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 3.0e-203 711.8 422 85.3
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 4.0e-203 711.4 419 87.1
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 6.8e-203 710.7 419 86.2
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 6.8e-203 710.7 419 85.9
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 6.8e-203 710.7 423 86.1
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 1.2e-202 709.9 423 86.5
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 1.5e-202 709.5 422 86.7
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 1.5e-202 709.5 423 86.3
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 2.0e-202 709.1 420 86.9
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 2.0e-202 709.1 421 86.2
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 2.0e-202 709.1 421 86.2
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 2.6e-202 708.8 431 84.9
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.6e-202 708.8 422 86.0
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 2.6e-202 708.8 419 86.6
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 2.6e-202 708.8 422 87.0
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 3.4e-202 708.4 423 85.6
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 4.4e-202 708.0 420 86.7
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 4.4e-202 708.0 422 85.8
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 4.4e-202 708.0 421 86.0
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 5.7e-202 707.6 440 84.5
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 7.5e-202 707.2 420 87.1
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 7.5e-202 707.2 420 86.7
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 7.5e-202 707.2 423 85.8
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 9.8e-202 706.8 422 86.7
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 9.8e-202 706.8 419 87.6
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 1.3e-201 706.4 422 86.7
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 1.3e-201 706.4 422 86.7
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.3e-201 706.4 423 85.8
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.3e-201 706.4 422 86.3
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 1.3e-201 706.4 423 85.8
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 1.7e-201 706.1 422 86.7
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 1.7e-201 706.1 422 86.7
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 2.2e-201 705.7 422 86.5
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 2.2e-201 705.7 419 86.4
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 2.2e-201 705.7 422 86.0
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 2.9e-201 705.3 420 85.5
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 3.7e-201 704.9 422 86.5
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 3.7e-201 704.9 431 84.7
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 3.7e-201 704.9 422 86.0
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 4.9e-201 704.5 422 86.3
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 4.9e-201 704.5 419 86.2
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 4.9e-201 704.5 422 85.3
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 4.9e-201 704.5 423 85.6
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 6.4e-201 704.1 423 86.5
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 8.3e-201 703.7 422 86.3
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 8.3e-201 703.7 423 85.1
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 1.1e-200 703.4 420 86.4
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 1.1e-200 703.4 425 85.6
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 1.4e-200 703.0 423 85.3
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.4e-200 703.0 423 85.1
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 1.4e-200 703.0 424 85.6
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.4e-200 703.0 419 85.9
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 1.8e-200 702.6 422 86.0
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 1.8e-200 702.6 422 86.0
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 2.4e-200 702.2 419 86.6
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 3.2e-200 701.8 419 85.7
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 3.2e-200 701.8 419 85.4
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 4.1e-200 701.4 471 80.0
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 4.1e-200 701.4 471 80.0
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 4.1e-200 701.4 438 83.1
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 5.4e-200 701.0 423 84.4
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 1.2e-199 699.9 422 86.0
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 4.6e-199 698.0 423 83.9
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 5.0e-198 694.5 423 85.1
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 8.6e-198 693.7 438 82.2
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 8.6e-198 693.7 418 85.2
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 3.3e-197 691.8 423 83.7
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 3.3e-197 691.8 452 82.1
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 3.6e-196 688.3 423 86.3
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 4.7e-196 688.0 432 83.1
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 1.1e-195 686.8 453 79.7
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 6.8e-195 684.1 423 83.9
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 6.0e-191 671.0 426 80.3
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 1.3e-190 669.8 388 88.9
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 7.3e-189 664.1 423 82.3
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.2e-188 663.3 392 86.0
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 1.6e-188 662.9 389 87.4
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 4.7e-188 661.4 502 71.7
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 2.9e-185 652.1 375 89.1
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 2.4e-184 649.0 473 74.8
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.2e-183 646.7 421 80.3
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.5e-181 639.8 363 89.3
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 3.3e-181 638.6 416 82.2
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 3.1e-179 632.1 397 80.4
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 4.4e-178 628.2 378 83.6
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 1.4e-176 623.2 373 85.0
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 2.4e-176 622.5 400 79.5
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 4.7e-172 608.2 415 74.2
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 2.2e-169 599.4 423 75.4
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 3.8e-169 598.6 408 73.5
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.9e-165 586.3 410 76.3
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 8.4e-161 570.9 334 87.1
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 2.6e-154 549.3 310 91.0
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 3.3e-149 532.3 422 65.2
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 3.3e-149 532.3 397 67.5
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 7.1e-144 514.6 404 65.8
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 2.0e-138 496.5 280 91.8
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 4.5e-138 495.4 459 63.2
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.0e-130 469.9 284 84.5
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 5.1e-126 455.3 392 66.8
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 8.8e-126 454.5 260 88.5
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.7e-113 413.7 243 87.2
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 9.1e-107 391.3 236 82.6
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 5.0e-105 385.6 225 87.6
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.6e-98 364.0 244 77.0
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 5.5e-96 355.5 205 88.3
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 6.2e-79 298.9 288 59.7
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 7.8e-74 282.0 296 51.4
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 6.8e-70 268.9 207 68.6
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 6.2e-63 245.7 147 83.0
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 1.7e-60 237.7 189 61.9
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 1.5e-48 198.0 198 62.1
Zm00001eb277730 Zea mays HOM05D004007 ORTHO05D005127 1.6e-47 194.5 134 73.1
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 2.6e-45 187.2 114 88.6
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 5.4e-43 179.5 130 69.2
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 2.1e-39 167.5 290 36.2
Aqoxy7G03385 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 4.8e-39 166.4 150 66.7
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 2.0e-37 161.0 109 78.9
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 3.5e-34 150.2 157 57.3
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 4.6e-34 149.8 157 56.7
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 4.9e-28 129.8 178 38.8
CSS0040446 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 4.2e-27 126.7 82 80.5
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 5.7e-24 116.3 149 49.7
CiPaw.03G130300 Carya illinoinensis HOM05D004007 ORTHO05D005127 5.9e-21 106.3 69 76.8
Cpa.g.sc165.34 Carica papaya HOM05D004007 ORTHO05D022233 1.8e-14 84.7 50 90.0
FvH4_2g21030 Fragaria vesca HOM05D004007 ORTHO05D022233 1.5e-13 81.6 53 81.1
HanXRQChr10g0293611 Helianthus annuus HOM05D004007 ORTHO05D219627 3.4e-13 80.5 100 51.0
Lalb_Chr21g0314011 Lupinus albus HOM05D004007 ORTHO05D022233 1.4e-11 75.1 40 92.5
Haze_26311 Corylus avellana HOM05D002944 ORTHO05D003377 4.2e-11 73.6 363 28.1
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 3.3e-08 63.9 37 81.1
TAR636G1356 Trochodendron aralioides HOM05D002574 ORTHO05D002797 6.3e-07 59.7 60 55.0
EL10Ac1g01458 Beta vulgaris HOM05D006505 ORTHO05D008086 1.8e-06 58.2 113 33.6
EL10Ac7g17956 Beta vulgaris HOM05D006505 ORTHO05D008086 3.1e-06 57.4 111 33.3


User provided reference genes

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