Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 1.7e-97 359.4 182 100.0
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 2.4e-88 328.9 168 97.6
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 1.3e-54 216.9 164 62.8
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 3.6e-52 208.8 160 61.9
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 8.9e-51 204.1 175 55.4
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 3.4e-50 202.2 168 57.1
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 5.8e-50 201.4 167 58.7
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 7.5e-50 201.1 167 58.7
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 2.9e-49 199.1 168 56.0
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 8.3e-49 197.6 160 56.2
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 1.4e-48 196.8 165 57.0
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 3.2e-48 195.7 162 56.2
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 4.1e-48 195.3 168 54.8
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 9.2e-48 194.1 166 55.4
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 9.2e-48 194.1 159 57.2
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 1.2e-47 193.7 161 57.1
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 1.6e-47 193.4 157 58.0
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 2.0e-47 193.0 159 59.1
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 2.7e-47 192.6 162 56.8
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 1.0e-46 190.7 157 57.3
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 1.0e-46 190.7 156 57.1
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 1.3e-46 190.3 168 53.0
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 1.3e-46 190.3 178 52.8
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 3.0e-46 189.1 166 53.6
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 3.0e-46 189.1 158 55.7
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 6.6e-46 188.0 158 58.9
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 8.6e-46 187.6 169 55.0
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 1.1e-45 187.2 162 53.1
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 1.1e-45 187.2 158 53.8
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 1.5e-45 186.8 172 50.6
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 4.3e-45 185.3 156 55.8
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 1.2e-44 183.7 158 54.4
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 2.1e-44 183.0 167 50.3
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 2.8e-44 182.6 157 56.1
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 8.1e-44 181.0 164 54.3
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 1.4e-43 180.3 159 54.1
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 2.3e-43 179.5 159 52.8
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 3.1e-43 179.1 159 56.0
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 5.2e-43 178.3 157 54.8
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 8.9e-43 177.6 165 52.1
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 8.9e-43 177.6 160 52.5
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 1.2e-42 177.2 164 53.0
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 1.2e-42 177.2 164 52.4
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 1.5e-42 176.8 165 51.5
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 1.5e-42 176.8 152 54.6
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.0e-42 176.4 153 53.6
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 2.6e-42 176.0 162 52.5
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 5.8e-42 174.9 150 54.0
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 7.5e-42 174.5 154 52.6
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 7.5e-42 174.5 153 52.9
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 7.5e-42 174.5 159 53.5
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 7.5e-42 174.5 158 50.6
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 1.7e-41 173.3 157 52.2
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 1.7e-41 173.3 157 52.2
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 2.9e-41 172.6 160 49.4
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 3.7e-41 172.2 151 56.3
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 4.9e-41 171.8 159 52.2
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 8.3e-41 171.0 161 50.3
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 1.1e-40 170.6 154 54.5
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 1.4e-40 170.2 161 50.3
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 1.9e-40 169.9 159 51.6
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 3.2e-40 169.1 159 50.9
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 5.4e-40 168.3 156 51.3
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 7.1e-40 167.9 156 51.3
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 2.7e-39 166.0 159 51.6
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 2.7e-39 166.0 157 53.5
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 3.5e-39 165.6 157 51.0
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 3.5e-39 165.6 171 49.1
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 6.0e-39 164.9 158 50.6
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 1.7e-38 163.3 155 51.0
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 3.0e-38 162.5 161 49.7
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 3.9e-38 162.2 157 51.0
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 6.6e-38 161.4 152 50.7
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 6.6e-38 161.4 160 51.2
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 8.6e-38 161.0 166 47.6
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.5e-37 160.2 157 50.3
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 1.5e-37 160.2 159 52.2
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 9.5e-37 157.5 121 57.0
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 1.6e-36 156.8 159 49.7
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 3.6e-36 155.6 158 50.6
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 3.6e-36 155.6 158 50.6
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 3.6e-36 155.6 143 52.4
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 3.6e-36 155.6 159 49.7
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 8.1e-36 154.5 158 48.7
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 8.1e-36 154.5 158 48.7
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 8.1e-36 154.5 159 48.4
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 1.1e-35 154.1 157 51.6
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 1.8e-35 153.3 158 49.4
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 1.8e-35 153.3 153 47.1
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 2.3e-35 152.9 160 46.9
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 4.0e-35 152.1 153 46.4
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 6.8e-35 151.4 168 48.2
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 8.9e-35 151.0 167 47.9
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 1.5e-34 150.2 159 48.4
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 5.8e-34 148.3 160 46.2
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 2.2e-33 146.4 160 45.6
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 2.9e-33 146.0 166 45.8
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 2.9e-33 146.0 167 46.1
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 9.2e-32 141.0 159 47.2
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 2.3e-30 136.3 159 44.0
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 3.0e-30 136.0 165 41.8
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 6.2e-28 128.3 153 43.1
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 1.4e-27 127.1 152 46.1
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 1.2e-26 124.0 163 38.7
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.4e-26 122.1 153 42.5
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 9.9e-26 120.9 124 42.7
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 6.4e-25 118.2 159 40.3
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 1.2e-23 114.0 125 45.6
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 3.0e-22 109.4 158 37.3
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 8.7e-22 107.8 158 39.9
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 3.2e-16 89.4 158 37.3
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 1.0e-14 84.3 153 31.4
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 5.1e-14 82.0 59 54.2
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 2.9e-09 66.2 142 33.1


User provided reference genes

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