Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 1.3e-90 336.3 154 100.0
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 1.4e-84 316.2 154 92.2
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 9.8e-59 230.3 154 66.9
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 1.8e-57 226.1 154 67.5
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 1.0e-55 220.3 154 64.3
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.2e-49 198.7 155 61.9
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 5.4e-49 198.0 155 59.4
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 5.4e-49 198.0 155 58.7
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 1.2e-48 196.8 158 58.9
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 2.0e-48 196.1 156 60.3
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 1.9e-46 189.5 154 58.4
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 2.5e-46 189.1 155 58.7
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 9.5e-46 187.2 156 57.1
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 9.5e-46 187.2 154 56.5
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 9.5e-46 187.2 156 58.3
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 1.2e-45 186.8 160 56.9
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 2.1e-45 186.0 157 56.7
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 2.8e-45 185.7 155 56.8
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 6.2e-45 184.5 155 56.1
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 6.2e-45 184.5 155 57.4
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 1.4e-44 183.3 155 57.4
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.8e-44 183.0 154 55.8
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 2.3e-44 182.6 154 55.8
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 5.2e-44 181.4 155 55.5
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 8.9e-44 180.6 155 57.4
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 2.0e-43 179.5 156 57.7
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 9.8e-43 177.2 164 52.4
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 1.3e-42 176.8 161 53.4
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 2.9e-42 175.6 154 53.9
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 3.7e-42 175.3 160 56.2
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 3.7e-42 175.3 162 55.6
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 1.9e-41 172.9 156 54.5
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 1.9e-41 172.9 155 56.1
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 3.2e-41 172.2 155 57.4
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 5.4e-41 171.4 155 55.5
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 5.4e-41 171.4 170 53.5
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 1.2e-40 170.2 179 50.3
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 1.6e-40 169.9 163 52.1
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 4.6e-40 168.3 161 54.7
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 7.8e-40 167.5 157 52.9
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 7.8e-40 167.5 157 55.4
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 1.0e-39 167.2 154 53.2
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 1.0e-39 167.2 162 51.9
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 3.0e-39 165.6 153 54.2
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 3.0e-39 165.6 161 52.8
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 8.6e-39 164.1 158 54.4
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 1.5e-38 163.3 155 54.2
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 1.5e-38 163.3 156 53.8
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 2.5e-38 162.5 160 51.2
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 4.3e-38 161.8 160 50.6
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 7.3e-38 161.0 156 53.8
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 9.5e-38 160.6 154 53.2
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 9.5e-38 160.6 156 52.6
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 9.5e-38 160.6 156 52.6
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 6.2e-37 157.9 189 46.0
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 1.8e-36 156.4 166 49.4
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 4.0e-36 155.2 159 49.1
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 2.0e-35 152.9 235 38.3
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 2.0e-35 152.9 149 51.0
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 1.7e-34 149.8 159 47.2
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 4.9e-34 148.3 154 48.7
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 4.9e-34 148.3 171 46.8
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 1.9e-33 146.4 156 50.6
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 3.2e-33 145.6 160 48.8
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 7.1e-33 144.4 156 49.4
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 7.1e-33 144.4 155 49.7
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 7.1e-33 144.4 180 43.9
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 9.2e-33 144.1 154 49.4
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 1.6e-32 143.3 157 49.0
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 1.6e-32 143.3 150 50.0
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 2.1e-32 142.9 154 46.8
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 2.1e-32 142.9 161 49.1
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 2.7e-32 142.5 110 60.0
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 4.6e-32 141.7 160 48.1
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 4.6e-32 141.7 156 49.4
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 3.9e-31 138.7 156 47.4
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 8.6e-31 137.5 154 44.8
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 2.5e-30 136.0 161 45.3
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 2.5e-30 136.0 162 45.1
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 1.2e-29 133.7 157 43.3
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 2.1e-29 132.9 175 42.9
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 2.8e-29 132.5 154 45.5
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 1.4e-28 130.2 111 54.1
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 3.1e-28 129.0 159 45.3
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 3.1e-28 129.0 158 46.2
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 5.2e-28 128.3 158 45.6
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 6.8e-28 127.9 108 56.5
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 2.6e-27 125.9 155 44.5
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 1.3e-26 123.6 156 42.9
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 1.3e-26 123.6 156 42.9
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 1.7e-26 123.2 159 45.9
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 1.1e-25 120.6 154 43.5
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 2.4e-25 119.4 155 43.2
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 5.4e-25 118.2 154 40.3
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 1.6e-24 116.7 176 39.8
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 1.7e-23 113.2 174 38.5
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 5.1e-23 111.7 130 46.2
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 1.9e-22 109.8 126 46.0
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 1.1e-20 104.0 247 31.6
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 9.9e-19 97.4 94 47.9
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 2.4e-17 92.8 154 39.0
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 7.1e-17 91.3 70 62.9
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 2.5e-14 82.8 69 56.5
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 3.8e-10 68.9 44 65.9
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 3.0e-07 59.3 36 72.2
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 1.5e-06 57.0 41 61.0
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 1.5e-06 57.0 43 53.5
Cc02_g35520 Coffea canephora HOM05D007256 ORTHO05D009109 4.3e-06 55.5 50 50.0
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 5.6e-06 55.1 71 42.3


User provided reference genes

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