Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5984 Papaver somniferum HOM05D000366 ORTHO05D030420 3.7e-227 791.2 399 100.0
PSO455G0217 Papaver somniferum HOM05D000366 ORTHO05D030420 2.0e-135 486.5 364 73.4
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 5.1e-91 339.0 501 44.1
PSO017G4808 Papaver somniferum HOM05D000366 ORTHO05D030420 3.6e-89 332.8 497 44.3
PSO478G1656 Papaver somniferum HOM05D000366 ORTHO05D030420 6.2e-89 332.0 501 44.5
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 2.0e-87 327.0 493 43.8
TAR629G0390 Trochodendron aralioides HOM05D002478 ORTHO05D000437 2.7e-28 130.6 375 30.4
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 1.7e-25 121.3 255 35.7
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 7.0e-24 115.9 163 40.5
Gorai.013G173100 Gossypium raimondii HOM05D000366 ORTHO05D000437 1.6e-23 114.8 158 41.1
Gohir.D13G153200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 5.9e-23 112.8 139 42.4
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 7.7e-23 112.5 139 41.7
Duzib213G0779 Durio zibethinus HOM05D000366 ORTHO05D000437 1.0e-22 112.1 139 41.7
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 1.0e-22 112.1 203 36.9
Gohir.A13G148700 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.3e-22 111.7 158 40.5
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 2.2e-22 110.9 180 36.7
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 8.5e-22 109.0 139 42.4
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 8.5e-22 109.0 169 38.5
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 1.1e-21 108.6 171 35.1
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 1.1e-21 108.6 162 38.3
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 1.5e-21 108.2 160 40.6
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.5e-21 108.2 135 40.0
COL.COLO4_17591 Corchorus olitorius HOM05D000366 ORTHO05D000437 2.5e-21 107.5 139 41.7
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 2.5e-21 107.5 141 43.3
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 3.2e-21 107.1 202 37.1
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 4.2e-21 106.7 174 39.1
Manes.15G092800 Manihot esculenta HOM05D000366 ORTHO05D000437 7.2e-21 105.9 178 36.0
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.2e-20 105.1 170 34.7
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 1.2e-20 105.1 170 34.7
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.6e-20 104.8 189 38.1
FvH4_3g18560 Fragaria vesca HOM05D000366 ORTHO05D000437 1.6e-20 104.8 142 43.0
FAN11G1632 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.6e-20 104.8 141 43.3
FAN16G3372 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.6e-20 104.8 158 41.1
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.6e-20 104.8 170 34.7
Ciclev10018500m.g Citrus clementina HOM05D000366 ORTHO05D000437 4.7e-20 103.2 297 30.3
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 1.8e-19 101.3 165 41.2
FAN21G1728 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.3e-19 100.9 142 42.3
Cpa.g.sc97.95 Carica papaya HOM05D000366 ORTHO05D000437 3.0e-19 100.5 138 41.3
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 5.2e-19 99.8 180 36.1
arahy.Tifrunner.gnm1.ann1.JLX6YP Arachis hypogaea HOM05D000366 ORTHO05D000437 6.8e-19 99.4 244 31.1
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 6.8e-19 99.4 180 35.6
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 6.8e-19 99.4 165 35.8
QL08p026669 Quercus lobata HOM05D000366 ORTHO05D000437 6.8e-19 99.4 154 38.3
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 8.8e-19 99.0 167 35.9
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 1.5e-18 98.2 190 34.2
arahy.Tifrunner.gnm1.ann1.7Z9IPQ Arachis hypogaea HOM05D000366 ORTHO05D000437 2.0e-18 97.8 244 30.3
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 5.7e-18 96.3 187 32.1
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 7.5e-18 95.9 168 36.9
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 9.8e-18 95.5 125 36.0
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 1.3e-17 95.1 135 41.5
Solyc07g062600.4 Solanum lycopersicum HOM05D000366 ORTHO05D000437 1.3e-17 95.1 142 38.7
Sopen07g030830 Solanum pennellii HOM05D000366 ORTHO05D000437 1.3e-17 95.1 142 38.7
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 2.2e-17 94.4 159 37.1
Lalb_Chr01g0016641 Lupinus albus HOM05D000366 ORTHO05D000437 3.7e-17 93.6 285 27.7
vmacro11921 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 4.8e-17 93.2 157 36.9
EL10Ac4g08310 Beta vulgaris HOM05D000366 ORTHO05D000437 8.3e-17 92.4 156 35.3
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 1.4e-16 91.7 140 39.3
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.8e-16 91.3 142 40.1
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 1.8e-16 91.3 141 39.0
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 1.8e-16 91.3 145 37.9
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 2.4e-16 90.9 156 36.5
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 3.1e-16 90.5 135 38.5
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 5.4e-16 89.7 208 32.2
Glyma.13G271100 Glycine max HOM05D000366 ORTHO05D000437 9.1e-16 89.0 256 30.9
Nitab4.5_0007253g0020 Nicotiana tabacum HOM05D000366 ORTHO05D000437 9.1e-16 89.0 142 36.6
Glyma.12G228700 Glycine max HOM05D000366 ORTHO05D000437 1.2e-15 88.6 161 36.0
VMungo1080G1639 Vigna mungo HOM05D000366 ORTHO05D000437 1.2e-15 88.6 234 29.1
ECA236G5053 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.6e-15 88.2 188 34.6
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 2.0e-15 87.8 141 37.6
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 3.5e-15 87.0 142 35.2
Nitab4.5_0000246g0180 Nicotiana tabacum HOM05D000366 ORTHO05D000437 4.5e-15 86.7 142 35.9
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 5.9e-15 86.3 172 32.0
Lalb_Chr20g0109351 Lupinus albus HOM05D000366 ORTHO05D000437 5.9e-15 86.3 173 34.1
Phvul.005G067300 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 5.9e-15 86.3 160 33.8
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 7.7e-15 85.9 138 38.4
Hma1.2p1_0052F.1_g029970 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 1.3e-14 85.1 197 28.9
Rhsim04G0024800 Rhododendron simsii HOM05D000366 ORTHO05D000437 1.3e-14 85.1 244 30.3
Lj3g0018614 Lotus japonicus HOM05D000366 ORTHO05D000437 2.9e-14 84.0 167 35.3
AUR62019535 Chenopodium quinoa HOM05D000366 ORTHO05D000437 3.8e-14 83.6 155 34.8
Hma1.2p1_2017F.1_g311140 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 3.8e-14 83.6 186 30.1
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 5.0e-14 83.2 159 35.2
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 1.1e-13 82.0 141 36.2
Sc16g0007490 Simmondsia chinensis HOM05D000366 ORTHO05D000437 1.1e-13 82.0 154 33.1
MSTRG.12870 Avicennia marina HOM05D000366 ORTHO05D000437 1.5e-13 81.6 141 36.2
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 1.5e-13 81.6 138 37.0
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 1.5e-13 81.6 149 35.6
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 2.5e-13 80.9 203 33.0
Thhalv10019928m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 2.5e-13 80.9 266 28.2
AUR62036102 Chenopodium quinoa HOM05D000366 ORTHO05D000437 3.2e-13 80.5 152 32.9
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 4.2e-13 80.1 187 29.4
Os04g0433900 Oryza sativa ssp. japonica HOM05D000366 ORTHO05D000437 7.2e-13 79.3 174 33.3
Carub.0003s1464 Capsella rubella HOM05D000366 ORTHO05D000437 9.5e-13 79.0 134 37.3
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 9.5e-13 79.0 267 30.0
AL3G27310 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 1.6e-12 78.2 152 37.5
Psat5g238000 Pisum sativum HOM05D000366 ORTHO05D000437 2.1e-12 77.8 247 27.9
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 2.1e-12 77.8 135 34.8
BcaB06g25336 Brassica carinata HOM05D000366 ORTHO05D000437 2.7e-12 77.4 302 27.8
TPR.G30903 Trifolium pratense HOM05D000366 ORTHO05D000437 2.7e-12 77.4 220 30.9
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 2.7e-12 77.4 147 34.7
DCAR_021018 Daucus carota HOM05D000366 ORTHO05D000437 6.1e-12 76.3 157 32.5
THA.LOC104810441 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 1.0e-11 75.5 135 35.6
AT3G14980 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 3.0e-11 73.9 151 37.1
DCAR_019593 Daucus carota HOM05D000366 ORTHO05D000437 4.0e-11 73.6 164 34.1
Aa31LG8G2180 Aethionema arabicum HOM05D000366 ORTHO05D000437 5.2e-11 73.2 138 35.5
BolC5t33907H Brassica oleracea HOM05D000366 ORTHO05D000437 5.2e-11 73.2 207 30.4
BraA05t22266Z Brassica rapa HOM05D000366 ORTHO05D000437 6.8e-11 72.8 201 29.9
Medtr2g078040 Medicago truncatula HOM05D000366 ORTHO05D000437 1.2e-10 72.0 221 28.5
HPP92_001078 Vanilla planifolia HOM05D000366 ORTHO05D000437 1.5e-10 71.6 145 34.5
C05p52210 Brassica napus HOM05D000366 ORTHO05D000437 2.0e-10 71.2 207 30.0
CARHR089940 Cardamine hirsuta HOM05D000366 ORTHO05D000437 2.6e-10 70.9 215 31.6
A05p34470 Brassica napus HOM05D000366 ORTHO05D000437 5.7e-10 69.7 303 26.1
Ah.06g185100 Amaranthus hybridus HOM05D000366 ORTHO05D000437 1.3e-09 68.6 154 30.5
Ca_03999_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 3.7e-09 67.0 230 28.3
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 6.3e-09 66.2 308 24.7
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 6.3e-09 66.2 297 25.6
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 1.2e-07 62.0 159 25.8
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 1.6e-07 61.6 143 28.7
BcaB06g29525 Brassica carinata HOM05D000366 ORTHO05D000437 8.6e-06 55.8 106 35.8


User provided reference genes

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