Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 7.1e-127 457.2 221 100.0
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 3.3e-100 368.6 208 80.3
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 4.3e-100 368.2 210 81.9
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 2.1e-99 365.9 210 81.0
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 6.2e-99 364.4 210 80.0
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 2.4e-98 362.5 210 80.0
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 9.0e-98 360.5 210 78.6
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 2.0e-97 359.4 210 79.0
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.0e-96 357.1 208 79.8
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.7e-96 356.3 208 79.8
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.2e-96 355.9 210 78.1
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.5e-95 352.4 212 78.3
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 2.5e-95 352.4 208 78.8
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 3.2e-95 352.1 208 77.4
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 7.1e-95 350.9 208 76.9
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 1.6e-94 349.7 208 77.4
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.1e-94 349.4 208 76.9
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 2.1e-94 349.4 210 76.2
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 4.6e-94 348.2 220 75.0
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.6e-94 348.2 210 76.2
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 4.6e-94 348.2 208 76.9
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 6.0e-94 347.8 210 75.2
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 6.0e-94 347.8 208 76.9
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 6.0e-94 347.8 212 78.3
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 7.9e-94 347.4 210 73.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 1.3e-93 346.7 208 77.9
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 3.0e-93 345.5 211 74.9
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.9e-93 345.1 212 76.9
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 5.1e-93 344.7 208 78.4
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 5.1e-93 344.7 197 81.7
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 6.7e-93 344.4 207 77.8
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 8.7e-93 344.0 208 75.0
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.7e-93 344.0 208 75.0
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.1e-92 343.6 210 74.3
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-92 343.6 208 76.0
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 1.9e-92 342.8 210 75.7
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.3e-92 342.0 210 73.8
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 5.7e-92 341.3 210 76.7
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 7.4e-92 340.9 209 75.6
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 9.6e-92 340.5 211 74.4
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.3e-91 340.1 210 75.2
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.8e-91 339.0 224 72.8
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.8e-91 339.0 211 73.5
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 3.7e-91 338.6 208 74.5
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 3.7e-91 338.6 211 73.5
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 4.8e-91 338.2 210 76.2
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.8e-91 338.2 210 75.2
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 4.8e-91 338.2 210 74.8
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 8.2e-91 337.4 210 71.4
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.1e-90 337.0 210 73.8
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 3.1e-90 335.5 210 75.2
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 5.3e-90 334.7 208 74.0
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.3e-90 334.7 210 74.3
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 5.3e-90 334.7 210 71.9
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 1.2e-89 333.6 195 79.0
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 4.5e-89 331.6 196 78.1
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 4.5e-89 331.6 210 72.4
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 5.9e-89 331.3 210 72.4
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 5.9e-89 331.3 220 72.7
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.0e-88 330.5 210 71.0
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 1.3e-88 330.1 210 74.3
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.7e-88 329.7 206 72.3
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.2e-88 329.3 210 71.0
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.2e-88 329.3 210 72.9
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.9e-88 328.9 211 71.6
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 5.0e-88 328.2 251 62.9
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 6.5e-88 327.8 210 73.3
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 8.4e-88 327.4 210 70.5
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 8.4e-88 327.4 195 78.5
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.1e-87 327.0 210 70.5
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.4e-87 326.6 210 71.0
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 2.5e-87 325.9 211 72.5
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 3.2e-87 325.5 210 70.5
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 4.2e-87 325.1 208 72.6
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 5.5e-87 324.7 210 71.4
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 5.5e-87 324.7 210 70.0
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 7.2e-87 324.3 210 71.9
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 1.2e-86 323.6 241 63.9
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 2.7e-86 322.4 210 69.5
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 2.7e-86 322.4 262 60.3
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 3.6e-86 322.0 210 69.5
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 3.6e-86 322.0 211 71.6
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 4.6e-86 321.6 210 69.0
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.8e-85 319.7 211 69.7
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 3.0e-85 318.9 211 69.7
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 1.9e-84 316.2 211 68.7
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.3e-83 313.5 207 70.0
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 1.3e-83 313.5 211 67.8
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 4.1e-82 308.5 220 65.9
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 2.2e-80 302.8 304 53.9
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 4.2e-79 298.5 221 65.6
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.6e-78 296.6 210 68.1
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 9.1e-74 280.8 168 76.8
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.2e-73 280.4 222 58.1
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 5.5e-71 271.6 220 55.0
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 5.5e-71 271.6 257 51.0
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.7e-70 269.2 170 73.5
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 6.7e-69 264.6 170 71.8
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 7.4e-68 261.2 217 59.0
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.0e-65 253.1 276 50.4
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 3.8e-64 248.8 210 56.7
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 6.1e-62 241.5 179 65.9
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 2.8e-59 232.6 287 42.2
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 4.2e-55 218.8 226 47.3
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 7.2e-55 218.0 340 40.9
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 3.0e-53 212.6 221 49.3
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.5e-47 193.7 109 77.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 2.5e-47 193.0 228 43.0
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 3.2e-47 192.6 214 45.3
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 9.8e-44 181.0 220 43.6
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 3.3e-39 166.0 118 66.1
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.5e-36 157.1 83 79.5
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.9e-35 152.1 113 65.5
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 7.0e-34 148.3 92 76.1
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 8.6e-24 114.8 71 71.8
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.8e-20 102.1 95 56.8
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 3.2e-18 96.3 69 68.1
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.6e-14 84.0 63 60.3
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 1.8e-13 80.5 109 43.1
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.4e-10 70.9 51 62.7
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 1.9e-10 70.5 101 35.6
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 7.1e-10 68.6 51 60.8
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 7.1e-10 68.6 51 60.8
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 6.6e-08 62.0 52 57.7
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 6.6e-08 62.0 87 39.1
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.5e-07 60.8 76 44.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 2.5e-07 60.1 65 43.1
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.5e-07 60.1 68 41.2
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.3e-07 59.7 45 57.8
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.3e-07 59.7 45 57.8
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 4.3e-07 59.3 70 37.1
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 9.6e-07 58.2 43 58.1
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 1.2e-06 57.8 77 41.6
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 2.8e-06 56.6 56 46.4
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 2.8e-06 56.6 75 38.7
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.8e-06 56.6 77 37.7
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 2.8e-06 56.6 73 41.1
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 4.7e-06 55.8 73 43.8
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 4.7e-06 55.8 87 34.5
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 4.7e-06 55.8 73 37.0
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 6.2e-06 55.5 75 40.0
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 6.2e-06 55.5 76 40.8
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 6.2e-06 55.5 80 36.2
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 6.2e-06 55.5 74 41.9
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 8.1e-06 55.1 81 37.0


User provided reference genes

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