Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4884 Papaver somniferum HOM05D004187 ORTHO05D004890 4.6e-97 357.8 173 100.0
PSO210G5857 Papaver somniferum HOM05D004187 ORTHO05D004890 2.3e-96 355.5 173 99.4
Aqoxy2G03437 Aquilegia oxysepala HOM05D004187 ORTHO05D004890 1.8e-53 213.0 168 62.5
Nn1g02390 Nelumbo nucifera HOM05D004187 ORTHO05D004890 4.5e-52 208.4 173 59.0
CsaV3_3G013040 Cucumis sativus L. HOM05D004187 ORTHO05D004890 3.2e-50 202.2 177 54.2
MD16G1197500 Malus domestica HOM05D004187 ORTHO05D004890 3.2e-50 202.2 172 55.8
ClCG05G004990 Citrullus lanatus HOM05D004187 ORTHO05D004890 7.1e-50 201.1 177 54.2
MELO3C006513.2 Cucumis melo HOM05D004187 ORTHO05D004890 7.1e-50 201.1 177 53.7
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 7.1e-50 201.1 171 55.6
MBI11_g32998_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 1.6e-49 199.9 172 57.6
TAR362G0393 Trochodendron aralioides HOM05D004187 ORTHO05D004890 6.1e-49 198.0 171 58.5
Sed0024336 Sechium edule HOM05D004187 ORTHO05D004890 1.8e-48 196.4 176 53.4
Sed0012407 Sechium edule HOM05D004187 ORTHO05D004890 3.9e-48 195.3 177 52.5
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 6.7e-48 194.5 173 53.2
Rhsim04G0199500 Rhododendron simsii HOM05D004187 ORTHO05D004890 8.7e-48 194.1 173 52.0
RcHm_v2.0_Chr4g0407591 Rosa chinensis HOM05D004187 ORTHO05D004890 8.7e-48 194.1 169 56.8
FAN18G3642 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.5e-47 192.6 171 53.2
PGR129G0008 Punica granatum HOM05D004187 ORTHO05D004890 5.7e-47 191.4 171 53.2
PGR142G1722 Punica granatum HOM05D004187 ORTHO05D004890 5.7e-47 191.4 171 53.2
FvH4_5g32450 Fragaria vesca HOM05D004187 ORTHO05D004890 9.7e-47 190.7 171 52.6
FAN13G2545 Fragaria x ananassa HOM05D004187 ORTHO05D004890 9.7e-47 190.7 171 53.2
Gorai.011G165600 Gossypium raimondii HOM05D004187 ORTHO05D004890 2.2e-46 189.5 180 50.6
Gohir.A10G118400 Gossypium hirsutum HOM05D004187 ORTHO05D004890 2.8e-46 189.1 176 50.0
Gohir.D10G148300 Gossypium hirsutum HOM05D004187 ORTHO05D004890 2.8e-46 189.1 176 50.6
Medtr5g006610 Medicago truncatula HOM05D004187 ORTHO05D004890 2.8e-46 189.1 171 51.5
GSVIVG01018017001 Vitis vinifera HOM05D004187 ORTHO05D004890 3.7e-46 188.7 172 53.5
Ciclev10005993m.g Citrus clementina HOM05D004187 ORTHO05D004890 6.3e-46 188.0 171 53.2
Cfa008463 Carpinus fangiana HOM05D004187 ORTHO05D004890 8.2e-46 187.6 192 49.5
CiPaw.02G122700 Carya illinoinensis HOM05D004187 ORTHO05D004890 8.2e-46 187.6 193 49.7
Dinv25939 Davidia involucrata HOM05D004187 ORTHO05D004890 8.2e-46 187.6 129 65.1
FvH4_4g00760 Fragaria vesca HOM05D004187 ORTHO05D004890 1.1e-45 187.2 171 52.0
FAN12G2319 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.1e-45 187.2 171 52.0
Actinidia40129 Actinidia chinensis HOM05D004187 ORTHO05D004890 1.4e-45 186.8 173 50.9
FAN22G0369 Fragaria x ananassa HOM05D004187 ORTHO05D004890 3.1e-45 185.7 171 52.0
Potri.008G155800 Populus trichocarpa HOM05D004187 ORTHO05D004890 3.1e-45 185.7 173 50.3
arahy.Tifrunner.gnm1.ann1.Q4QH0F Arachis hypogaea HOM05D004187 ORTHO05D004890 6.9e-45 184.5 152 57.2
Glyma.01G235900 Glycine max HOM05D004187 ORTHO05D004890 6.9e-45 184.5 152 54.6
arahy.Tifrunner.gnm1.ann1.Q6C7EF Arachis hypogaea HOM05D004187 ORTHO05D004890 9.0e-45 184.1 152 57.2
Rhsim02G0027200 Rhododendron simsii HOM05D004187 ORTHO05D004890 9.0e-45 184.1 180 52.2
Manes.15G031200 Manihot esculenta HOM05D004187 ORTHO05D004890 2.0e-44 183.0 165 51.5
Sabra08G0118600 Salix brachista HOM05D004187 ORTHO05D004890 2.0e-44 183.0 173 49.1
arahy.Tifrunner.gnm1.ann1.LSRC2Y Arachis hypogaea HOM05D004187 ORTHO05D004890 2.6e-44 182.6 152 56.6
Ca_24413_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.6e-44 182.6 119 64.7
QL06p001566 Quercus lobata HOM05D004187 ORTHO05D004890 2.6e-44 182.6 175 49.7
arahy.Tifrunner.gnm1.ann1.8FXP11 Arachis hypogaea HOM05D004187 ORTHO05D004890 7.7e-44 181.0 155 56.1
Haze_11210 Corylus avellana HOM05D004187 ORTHO05D004890 7.7e-44 181.0 192 49.0
Phvul.002G043400 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 7.7e-44 181.0 133 60.2
TAR633G0827 Trochodendron aralioides HOM05D004187 ORTHO05D004890 1.3e-43 180.3 121 66.1
FAN08G0419 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.7e-43 179.9 117 66.7
CSS0034976 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 2.2e-43 179.5 162 50.6
Lalb_Chr05g0211101 Lupinus albus HOM05D004187 ORTHO05D004890 2.2e-43 179.5 142 59.2
vmacro15360 Vaccinium macrocarpon HOM05D004187 ORTHO05D004890 2.2e-43 179.5 178 51.7
VMungo0251G0090 Vigna mungo HOM05D004187 ORTHO05D004890 2.2e-43 179.5 122 62.3
CANSAT78G1519 Cannabis sativa HOM05D004187 ORTHO05D004890 2.9e-43 179.1 178 50.6
CSS0045006 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 3.8e-43 178.7 129 61.2
AUR62001090 Chenopodium quinoa HOM05D004187 ORTHO05D004890 3.8e-43 178.7 173 51.4
THA.LOC104803042 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 3.8e-43 178.7 176 49.4
Nitab4.5_0000050g0260 Nicotiana tabacum HOM05D004187 ORTHO05D004890 6.5e-43 177.9 168 50.0
TWI73G1209 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 6.5e-43 177.9 178 48.3
Duzib212G0360 Durio zibethinus HOM05D004187 ORTHO05D004890 8.5e-43 177.6 146 55.5
Ca_24412_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.4e-42 176.8 127 59.1
Ca_30960_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.4e-42 176.8 127 59.1
Medtr5g006600 Medicago truncatula HOM05D004187 ORTHO05D004890 1.9e-42 176.4 124 62.1
Atru.chr4.2392 Acer truncatum HOM05D004187 ORTHO05D004890 7.2e-42 174.5 171 46.8
Manes.03G175300 Manihot esculenta HOM05D004187 ORTHO05D004890 9.4e-42 174.1 174 50.0
Eucgr.H03428 Eucalyptus grandis HOM05D004187 ORTHO05D004890 2.1e-41 172.9 176 47.7
TPR.G37866 Trifolium pratense HOM05D004187 ORTHO05D004890 2.1e-41 172.9 124 59.7
Psat2g190440 Pisum sativum HOM05D004187 ORTHO05D004890 2.7e-41 172.6 157 49.0
Dinv03045 Davidia involucrata HOM05D004187 ORTHO05D004890 3.6e-41 172.2 121 61.2
Actinidia32414 Actinidia chinensis HOM05D004187 ORTHO05D004890 4.6e-41 171.8 114 64.0
LjContig00408g0013113 Lotus japonicus HOM05D004187 ORTHO05D004890 7.9e-41 171.0 132 56.1
TWI53G1349 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 7.9e-41 171.0 176 48.3
Hma1.2p1_0207F.1_g088010 Hydrangea macrophylla HOM05D004187 ORTHO05D004890 1.4e-40 170.2 165 49.1
Atru.chr4.2417 Acer truncatum HOM05D004187 ORTHO05D004890 1.8e-40 169.9 171 46.8
COL.COLO4_21526 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.8e-40 169.9 113 62.8
Sc19g0004030 Simmondsia chinensis HOM05D004187 ORTHO05D004890 1.8e-40 169.9 168 47.6
ECA247G1582 Erigeron canadensis HOM05D004187 ORTHO05D004890 2.3e-40 169.5 164 48.2
Glyma.11G007300 Glycine max HOM05D004187 ORTHO05D004890 2.3e-40 169.5 111 63.1
Nitab4.5_0001547g0030 Nicotiana tabacum HOM05D004187 ORTHO05D004890 2.3e-40 169.5 175 48.6
Psat2g190480 Pisum sativum HOM05D004187 ORTHO05D004890 2.3e-40 169.5 123 60.2
AL3G36980 Arabidopsis lyrata HOM05D004187 ORTHO05D004890 3.9e-40 168.7 159 49.1
Nitab4.5_0000085g0360 Nicotiana tabacum HOM05D004187 ORTHO05D004890 3.9e-40 168.7 175 48.6
Nitab4.5_0001792g0010 Nicotiana tabacum HOM05D004187 ORTHO05D004890 3.9e-40 168.7 114 61.4
Carub.0003s2284 Capsella rubella HOM05D004187 ORTHO05D004890 6.7e-40 167.9 158 48.1
DCAR_031726 Daucus carota HOM05D004187 ORTHO05D004890 8.8e-40 167.5 154 52.6
TPR.G37887 Trifolium pratense HOM05D004187 ORTHO05D004890 1.1e-39 167.2 119 58.0
AUR62008916 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.5e-39 166.8 173 49.1
Lj3A731T58 Lonicera japonica HOM05D004187 ORTHO05D004890 2.0e-39 166.4 124 58.1
Cc10_g08560 Coffea canephora HOM05D004187 ORTHO05D004890 2.5e-39 166.0 164 51.2
AT3G22680 Arabidopsis thaliana HOM05D004187 ORTHO05D004890 3.3e-39 165.6 158 48.7
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 4.3e-39 165.2 163 45.4
THA.LOC104808564 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 4.3e-39 165.2 132 56.1
Peaxi162Scf00245g00106 Petunia axillaris HOM05D004187 ORTHO05D004890 5.7e-39 164.9 160 46.9
CDE07G0031 Ceratophyllum demersum HOM05D004187 ORTHO05D004890 7.4e-39 164.5 170 49.4
Rhsim03G0003800 Rhododendron simsii HOM05D004187 ORTHO05D004890 9.7e-39 164.1 175 48.6
SalBow2G2347 Salvia bowleyana HOM05D004187 ORTHO05D004890 9.7e-39 164.1 166 48.2
ATR0665G390 Amborella trichopoda HOM05D004187 ORTHO05D004890 1.7e-38 163.3 173 46.8
SalBow2G0844 Salvia bowleyana HOM05D004187 ORTHO05D004890 2.2e-38 162.9 171 46.8
ECA233G0410 Erigeron canadensis HOM05D004187 ORTHO05D004890 4.8e-38 161.8 164 47.0
MSTRG.4047 Avicennia marina HOM05D004187 ORTHO05D004890 6.3e-38 161.4 167 45.5
CARHR098560 Cardamine hirsuta HOM05D004187 ORTHO05D004890 1.4e-37 160.2 148 48.0
Thhalv10021679m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.4e-37 160.2 153 47.7
HanXRQChr08g0219391 Helianthus annuus HOM05D004187 ORTHO05D004890 2.4e-37 159.5 164 49.4
Lsat_1_v5_gn_8_21341 Lactuca sativa HOM05D004187 ORTHO05D004890 4.1e-37 158.7 129 54.3
Peaxi162Scf00092g00016 Petunia axillaris HOM05D004187 ORTHO05D004890 4.1e-37 158.7 117 57.3
Sopen10g014270 Solanum pennellii HOM05D004187 ORTHO05D004890 4.1e-37 158.7 168 47.0
A03p42920 Brassica napus HOM05D004187 ORTHO05D004890 5.3e-37 158.3 159 47.8
BraA03t13436Z Brassica rapa HOM05D004187 ORTHO05D004890 5.3e-37 158.3 159 47.8
PGSC0003DMG401028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 5.3e-37 158.3 169 49.1
Aa31LG3G2350 Aethionema arabicum HOM05D004187 ORTHO05D004890 9.1e-37 157.5 131 52.7
BcaC01g03429 Brassica carinata HOM05D004187 ORTHO05D004890 1.0e-35 154.1 159 47.2
BcaC01g03430 Brassica carinata HOM05D004187 ORTHO05D004890 1.0e-35 154.1 159 47.2
C03p52670 Brassica napus HOM05D004187 ORTHO05D004890 1.0e-35 154.1 159 47.2
BolC3t17535H Brassica oleracea HOM05D004187 ORTHO05D004890 1.0e-35 154.1 159 47.2
CAN.G1402.3 Capsicum annuum HOM05D004187 ORTHO05D004890 6.5e-35 151.4 128 52.3
Potri.008G076500 Populus trichocarpa HOM05D004187 ORTHO05D004890 8.5e-35 151.0 117 60.7
Migut.G00365 Erythranthe guttata HOM05D004187 ORTHO05D004890 1.1e-34 150.6 131 50.4
BcaB06g26379 Brassica carinata HOM05D004187 ORTHO05D004890 1.9e-34 149.8 153 47.7
BcaC05g28028 Brassica carinata HOM05D004187 ORTHO05D004890 4.2e-34 148.7 117 54.7
C05p40440 Brassica napus HOM05D004187 ORTHO05D004890 4.2e-34 148.7 117 54.7
BolC5t32785H Brassica oleracea HOM05D004187 ORTHO05D004890 4.2e-34 148.7 117 54.7
BraA05t21487Z Brassica rapa HOM05D004187 ORTHO05D004890 9.4e-34 147.5 169 45.0
Sp3g20440 Schrenkiella parvula HOM05D004187 ORTHO05D004890 9.4e-34 147.5 167 44.3
PGSC0003DMG402028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 9.4e-34 147.5 114 56.1
Solyc10g045190.3 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.2e-33 147.1 114 56.1
Thhalv10017318m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.6e-33 146.7 117 52.1
HPP92_009615 Vanilla planifolia HOM05D004187 ORTHO05D004890 2.1e-33 146.4 166 44.0
A05p26020 Brassica napus HOM05D004187 ORTHO05D004890 2.7e-33 146.0 160 46.2
PGSC0003DMG400039476 Solanum tuberosum HOM05D004187 ORTHO05D004890 3.6e-33 145.6 114 52.6
Solyc09g082480.2 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.3e-32 142.9 121 51.2
QL08p059729 Quercus lobata HOM05D004187 ORTHO05D004890 6.7e-32 141.4 118 54.2
SGA_v2.0_scaffold191G40487 Striga asiatica HOM05D004187 ORTHO05D004890 6.7e-32 141.4 127 48.8
RcHm_v2.0_Chr1g0367131 Rosa chinensis HOM05D004187 ORTHO05D004890 8.8e-32 141.0 124 53.2
AUR62001087 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.5e-31 140.2 184 44.6
unitig_22.g6822 Utricularia gibba HOM05D004187 ORTHO05D004890 1.3e-30 137.1 161 44.1
Sopen09g031340 Solanum pennellii HOM05D004187 ORTHO05D004890 2.2e-30 136.3 112 53.6
Prupe.2G235500 Prunus persica HOM05D004187 ORTHO05D004890 2.8e-30 136.0 117 51.3
Cfa001472 Carpinus fangiana HOM05D004187 ORTHO05D004890 8.2e-30 134.4 126 50.0
Thhalv10029384m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 8.2e-30 134.4 120 48.3
Haze_17068 Corylus avellana HOM05D004187 ORTHO05D004890 1.1e-29 134.0 126 50.8
Atru.chr7.913 Acer truncatum HOM05D004187 ORTHO05D004890 1.2e-28 130.6 111 50.5
Atru.chr1.2916 Acer truncatum HOM05D004187 ORTHO05D004890 2.0e-28 129.8 114 50.0
Sopen09g031300 Solanum pennellii HOM05D004187 ORTHO05D004890 1.3e-27 127.1 114 48.2
PGSC0003DMG400040737 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.7e-27 126.7 109 48.6
COL.COLO4_15044 Corchorus olitorius HOM05D004187 ORTHO05D004890 5.0e-27 125.2 118 50.8
Duzib114G0324 Durio zibethinus HOM05D004187 ORTHO05D004890 4.2e-26 122.1 109 55.0
PGSC0003DMG400039782 Solanum tuberosum HOM05D004187 ORTHO05D004890 7.2e-26 121.3 103 48.5
Manes.12G002301 Manihot esculenta HOM05D004187 ORTHO05D004890 3.6e-25 119.0 109 49.5
Nn6g35138 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.0e-24 117.5 110 54.5
Atru.chr1.2920 Acer truncatum HOM05D004187 ORTHO05D004890 4.0e-24 115.5 130 43.8
Sopen09g031290 Solanum pennellii HOM05D004187 ORTHO05D004890 8.8e-24 114.4 96 52.1
Solyc09g082430.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 6.3e-22 108.2 96 52.1
Lalb_Chr10g0091621 Lupinus albus HOM05D004187 ORTHO05D004890 8.2e-22 107.8 118 46.6
Lj1g0009372 Lotus japonicus HOM05D004187 ORTHO05D004890 2.4e-21 106.3 119 44.5
Lj1g0019332 Lotus japonicus HOM05D004187 ORTHO05D004890 2.4e-21 106.3 119 44.5
Solyc09g082420.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.4e-21 106.3 93 51.6
VMungo1383G1788 Vigna mungo HOM05D004187 ORTHO05D004890 4.1e-21 105.5 132 40.2
Phvul.008G010500 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 1.6e-20 103.6 112 44.6
PGSC0003DMG400032269 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.3e-19 100.5 84 51.2
Ca_12246_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 5.0e-19 98.6 105 47.6
Lj1g0011366 Lotus japonicus HOM05D004187 ORTHO05D004890 8.5e-19 97.8 119 42.9
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 4.2e-18 95.5 129 41.1
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 2.1e-17 93.2 101 50.5
PGSC0003DMG400013771 Solanum tuberosum HOM05D004187 ORTHO05D004890 6.1e-17 91.7 77 50.6
Solyc09g082440.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.5e-15 87.0 73 53.4
Lalb_Chr16g0376451 Lupinus albus HOM05D004187 ORTHO05D004890 5.4e-13 78.6 53 62.3
PGSC0003DMG400032265 Solanum tuberosum HOM05D004187 ORTHO05D004890 5.4e-13 78.6 68 47.1
Sabra10G0059200 Salix brachista HOM05D004187 ORTHO05D004890 1.2e-12 77.4 122 38.5
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 3.5e-12 75.9 100 44.0
Potri.010G083751 Populus trichocarpa HOM05D004187 ORTHO05D004890 1.2e-07 60.8 42 61.9
BcaB03g14654 Brassica carinata HOM05D004187 ORTHO05D004890 3.7e-06 55.8 72 33.3
Zm00001eb275620 Zea mays HOM05D004187 ORTHO05D004890 8.3e-06 54.7 45 55.6


User provided reference genes

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