Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4202 Papaver somniferum HOM05D005507 ORTHO05D007316 2.3e-70 268.9 140 100.0
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 8.9e-51 203.8 179 64.8
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 4.4e-50 201.4 179 64.8
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.2e-39 166.8 179 53.6
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.7e-38 162.9 179 51.4
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 1.5e-37 159.8 179 52.0
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 3.3e-37 158.7 179 51.4
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 3.3e-37 158.7 179 52.0
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 3.3e-37 158.7 155 56.8
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 4.3e-37 158.3 179 52.0
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 7.3e-37 157.5 179 49.7
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 7.3e-37 157.5 179 50.8
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 9.6e-37 157.1 179 50.8
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 1.3e-36 156.8 178 50.0
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.6e-36 156.4 179 49.7
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 2.1e-36 156.0 179 49.2
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 2.1e-36 156.0 179 50.3
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 2.1e-36 156.0 183 49.7
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 2.1e-36 156.0 179 50.3
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 3.6e-36 155.2 179 48.0
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 3.6e-36 155.2 179 49.2
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 1.1e-35 153.7 179 49.2
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 1.4e-35 153.3 179 47.5
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 2.4e-35 152.5 179 49.2
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 2.4e-35 152.5 179 49.7
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 3.1e-35 152.1 179 48.6
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 4.0e-35 151.8 179 49.2
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 5.3e-35 151.4 179 47.5
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 6.9e-35 151.0 179 48.6
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 9.0e-35 150.6 179 48.6
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 1.2e-34 150.2 135 54.1
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 1.5e-34 149.8 179 48.6
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 3.4e-34 148.7 179 48.0
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 4.5e-34 148.3 179 47.5
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 5.8e-34 147.9 179 47.5
FvH4_6g13600 Fragaria vesca HOM05D005507 ORTHO05D007316 5.8e-34 147.9 179 48.0
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 5.8e-34 147.9 179 48.0
CDE07G0172 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 7.6e-34 147.5 179 46.9
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 7.6e-34 147.5 179 45.3
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 9.9e-34 147.1 179 46.9
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 1.3e-33 146.7 179 48.0
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 1.7e-33 146.4 179 46.9
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 2.9e-33 145.6 179 45.8
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 2.9e-33 145.6 179 46.9
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 4.9e-33 144.8 187 46.5
FAN09G0180 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.9e-33 144.8 179 46.9
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 6.4e-33 144.4 179 45.8
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 6.4e-33 144.4 177 46.3
Os01g0841800 Oryza sativa ssp. japonica HOM05D005507 ORTHO05D007316 8.4e-33 144.1 178 45.5
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 1.1e-32 143.7 178 46.6
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 1.1e-32 143.7 179 46.9
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 1.4e-32 143.3 179 45.3
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 2.4e-32 142.5 178 46.6
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 7.1e-32 141.0 179 43.6
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 9.3e-32 140.6 181 45.3
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 1.2e-31 140.2 179 46.4
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 1.2e-31 140.2 178 45.5
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 1.6e-31 139.8 179 43.6
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 1.6e-31 139.8 178 45.5
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 2.1e-31 139.4 178 46.1
Hund10642 Selenicereus undatus HOM05D005507 ORTHO05D007316 2.7e-31 139.0 176 46.6
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 3.5e-31 138.7 178 44.9
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 1.0e-30 137.1 179 43.6
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 1.3e-30 136.7 179 45.3
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 2.3e-30 136.0 178 44.9
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 2.3e-30 136.0 174 46.0
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 3.0e-30 135.6 179 44.7
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 5.1e-30 134.8 179 43.6
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 5.1e-30 134.8 178 44.9
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 5.1e-30 134.8 179 43.6
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 1.1e-29 133.7 179 43.6
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 1.1e-29 133.7 207 40.6
Nitab4.5_0011443g0010 Nicotiana tabacum HOM05D005507 ORTHO05D007316 1.1e-29 133.7 181 44.2
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 1.1e-29 133.7 179 43.6
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 1.5e-29 133.3 179 43.0
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 1.9e-29 132.9 179 43.6
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 1.9e-29 132.9 178 43.8
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 1.9e-29 132.9 175 45.1
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 2.5e-29 132.5 179 43.0
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 2.5e-29 132.5 181 44.2
HPP92_018140 Vanilla planifolia HOM05D005507 ORTHO05D007316 2.5e-29 132.5 179 43.0
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 7.4e-29 131.0 179 41.3
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 2.1e-28 129.4 179 45.3
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 4.8e-28 128.3 179 41.9
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 6.2e-28 127.9 179 42.5
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 1.4e-27 126.7 179 40.8
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 1.8e-27 126.3 179 41.9
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 1.8e-27 126.3 179 41.9
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 2.4e-27 125.9 179 41.3
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 2.4e-27 125.9 179 41.3
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 1.5e-26 123.2 179 40.8
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 2.0e-26 122.9 179 40.8
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 9.9e-26 120.6 179 40.2
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 3.2e-24 115.5 173 41.6
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 5.5e-24 114.8 179 39.7
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 5.5e-24 114.8 173 41.0
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 7.9e-23 110.9 110 54.5
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 1.8e-22 109.8 159 42.1
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 2.3e-22 109.4 179 40.8
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 1.1e-21 107.1 146 45.9
Psat5g035720 Pisum sativum HOM05D005507 ORTHO05D007316 2.9e-17 92.4 151 39.7
EL10As1g23037 Beta vulgaris HOM05D005507 ORTHO05D007316 3.2e-16 89.0 69 58.0
Ca_19986_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 1.2e-15 87.0 65 61.5
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 2.3e-14 82.8 138 39.9
Pp3c14_20610 Physcomitrium patens HOM05D005507 ORTHO05D007316 1.4e-11 73.6 171 29.2
SEGI_35618 Sequoiadendron giganteum HOM05D005507 ORTHO05D007316 3.4e-10 68.9 67 52.2
EL10As1g23036 Beta vulgaris HOM05D005507 ORTHO05D007316 7.6e-10 67.8 63 60.3
SMO119G0389 Selaginella moellendorffii HOM05D005507 ORTHO05D007316 1.3e-09 67.0 171 29.2
Mapoly0006s0179 Marchantia polymorpha HOM05D005507 ORTHO05D007316 2.5e-08 62.8 169 27.8
AagrBONN_evm.TU.Sc2ySwM_362.2750 Anthoceros agrestis HOM05D005507 ORTHO05D007316 7.9e-07 57.8 171 25.7
CBR_g72631 Chara braunii HOM05D005507 ORTHO05D007316 1.0e-06 57.4 178 25.8


User provided reference genes

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