Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 1.8e-237 825.5 395 100.0
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 1.6e-161 573.2 395 71.6
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 9.6e-159 563.9 390 69.7
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 2.0e-156 556.2 295 90.2
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 3.2e-154 548.9 388 69.3
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 3.0e-152 542.3 384 69.3
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 3.9e-152 542.0 393 67.7
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 2.5e-151 539.3 384 69.0
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 1.4e-149 533.5 383 68.4
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 3.1e-149 532.3 395 66.6
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 5.3e-149 531.6 391 66.8
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 2.0e-148 529.6 395 67.8
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 7.6e-148 527.7 384 68.5
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 1.3e-147 526.9 387 67.4
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 1.7e-147 526.6 384 68.0
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 4.9e-147 525.0 387 68.0
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 8.4e-147 524.2 384 67.7
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 1.1e-146 523.9 384 68.2
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 2.4e-146 522.7 399 67.2
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 4.2e-146 521.9 386 67.4
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 1.6e-145 520.0 389 67.4
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.8e-144 516.5 381 67.5
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 2.3e-144 516.2 384 66.9
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 3.9e-144 515.4 392 66.6
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 1.9e-143 513.1 390 65.6
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 1.3e-142 510.4 382 67.8
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 2.1e-142 509.6 382 66.8
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 2.8e-142 509.2 388 65.2
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 3.7e-142 508.8 392 65.8
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 8.2e-142 507.7 382 66.5
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 8.2e-142 507.7 387 66.4
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 1.1e-141 507.3 381 66.1
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 3.1e-141 505.8 385 65.5
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 5.8e-140 501.5 385 66.0
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 7.6e-140 501.1 387 65.4
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 1.0e-139 500.7 388 65.7
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 6.5e-139 498.0 390 64.9
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 1.1e-138 497.3 382 65.4
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 2.5e-138 496.1 385 64.7
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 2.5e-138 496.1 362 69.1
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 3.2e-138 495.7 385 64.7
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 9.3e-138 494.2 397 63.0
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 9.3e-138 494.2 381 65.4
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 2.1e-137 493.0 385 62.3
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 3.5e-137 492.3 384 65.4
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 4.6e-137 491.9 395 63.8
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 7.9e-137 491.1 385 64.4
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 3.9e-136 488.8 388 64.4
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 3.9e-136 488.8 380 65.8
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 7.4e-135 484.6 384 64.6
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 9.7e-135 484.2 395 62.0
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 1.6e-134 483.4 393 61.1
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 2.8e-134 482.6 395 62.8
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 6.3e-134 481.5 385 62.9
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 5.3e-133 478.4 386 64.2
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 5.3e-133 478.4 382 63.6
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 1.2e-132 477.2 388 63.7
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 2.6e-132 476.1 391 60.9
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 6.5e-131 471.5 391 61.4
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 4.2e-130 468.8 383 60.8
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.2e-129 467.2 420 59.3
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.2e-129 467.2 371 64.4
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 7.9e-129 464.5 389 60.7
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 3.3e-127 459.1 389 60.4
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 6.3e-126 454.9 388 60.1
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.5e-124 450.3 387 59.7
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 1.5e-124 450.3 393 58.0
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 4.5e-124 448.7 375 61.6
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.3e-123 447.2 386 59.3
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 8.5e-123 444.5 370 61.1
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 2.7e-121 439.5 379 58.0
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 3.6e-121 439.1 345 64.1
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.4e-120 437.2 380 58.7
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 3.9e-120 435.6 356 62.4
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.1e-117 427.6 358 62.0
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 3.6e-113 412.5 329 63.2
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 1.8e-112 410.2 336 60.7
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 4.8e-110 402.1 297 67.0
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 8.2e-110 401.4 322 65.2
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 3.8e-107 392.5 449 49.2
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.5e-103 380.6 385 52.7
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 1.1e-101 374.4 315 60.6
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 3.5e-100 369.4 463 46.7
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 1.5e-98 364.0 389 52.2
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 9.4e-98 361.3 348 54.9
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.6e-95 353.2 315 58.1
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 1.2e-92 344.4 299 61.5
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.2e-81 307.8 540 38.7
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.6e-81 307.4 378 48.9
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 6.6e-75 285.4 289 52.6
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 1.8e-72 277.3 169 76.3
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.8e-72 277.3 263 57.8
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 3.2e-69 266.5 173 73.4
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 1.6e-68 264.2 423 37.6
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.0e-67 261.5 305 47.9
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 1.0e-67 261.5 392 39.8
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.0e-67 260.0 376 43.6
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 9.5e-66 255.0 247 53.8
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 1.4e-64 251.1 288 50.3
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 8.9e-64 248.4 155 75.5
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.7e-62 244.2 356 43.3
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 2.9e-62 243.4 271 49.8
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 1.2e-57 228.0 222 55.4
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 1.4e-56 224.6 259 49.8
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.0e-43 181.8 111 77.5
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 1.9e-42 177.6 411 34.8
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.2e-38 164.1 124 65.3
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 2.9e-38 163.7 403 31.3
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 1.0e-35 155.2 200 45.0
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 5.3e-32 142.9 176 40.9
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 4.2e-29 133.3 85 69.4
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 4.6e-28 129.8 84 73.8
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.0e-27 128.6 80 77.5
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.3e-27 127.5 80 73.8
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-26 125.2 141 45.4
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.4e-24 118.2 88 62.5
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 9.0e-24 115.5 313 29.4
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 4.9e-22 109.8 69 78.3
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 8.4e-22 109.0 58 81.0
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.8e-17 94.0 74 63.5
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.6e-15 87.4 55 63.6
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.6e-15 87.4 55 63.6
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.9e-13 81.3 52 71.2
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 5.5e-13 79.7 55 61.8
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 3.9e-11 73.6 65 61.5
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 6.7e-11 72.8 121 38.8
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.5e-10 71.6 67 52.2
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 2.2e-09 67.8 86 38.4
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 2.0e-07 61.2 30 86.7
PRCOL_00004583 Prasinoderma coloniale HOM05D000064 ORTHO05D025009 5.9e-07 59.7 379 23.2


User provided reference genes

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