Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0544 Papaver somniferum HOM05D004116 ORTHO05D004734 0.0e+00 1822.4 962 100.0
PSO144G0086 Papaver somniferum HOM05D004116 ORTHO05D004734 0.0e+00 1409.0 988 76.0
PSO325G0009 Papaver somniferum HOM05D004116 ORTHO05D004734 0.0e+00 1277.3 983 69.0
PSO144G0082 Papaver somniferum HOM05D004116 ORTHO05D004734 6.5e-286 987.6 964 57.5
PSO063G3309 Papaver somniferum HOM05D004116 ORTHO05D004734 1.2e-279 966.8 1035 53.0
PSO013G0369 Papaver somniferum HOM05D004116 ORTHO05D004734 5.9e-279 964.5 1035 52.9
Actinidia26244 Actinidia chinensis HOM05D004116 ORTHO05D004734 5.6e-277 958.0 1041 52.6
TAR629G1084 Trochodendron aralioides HOM05D004116 ORTHO05D004734 4.0e-275 951.8 1041 52.5
Dinv11490 Davidia involucrata HOM05D004116 ORTHO05D004734 4.9e-273 944.9 1037 52.7
Lj4C115G25 Lonicera japonica HOM05D004116 ORTHO05D004734 7.0e-272 941.0 1036 51.9
Dinv33806 Davidia involucrata HOM05D004116 ORTHO05D004734 1.2e-271 940.3 1039 51.3
MD17G1056200 Malus domestica HOM05D004116 ORTHO05D004734 1.2e-271 940.3 1027 53.2
GSVIVG01011484001 Vitis vinifera HOM05D004116 ORTHO05D004734 1.3e-270 936.8 1035 52.1
PGSC0003DMG400001440 Solanum tuberosum HOM05D004116 ORTHO05D004734 1.7e-270 936.4 1040 52.4
Prupe.3G259400 Prunus persica HOM05D004116 ORTHO05D004734 5.0e-270 934.9 1031 53.2
QL02p039609 Quercus lobata HOM05D004116 ORTHO05D004734 5.0e-270 934.9 1029 51.9
CAN.G206.195 Capsicum annuum HOM05D004116 ORTHO05D004734 6.6e-270 934.5 1040 52.3
QL02p039361 Quercus lobata HOM05D004116 ORTHO05D004734 1.1e-269 933.7 1029 51.9
Hma1.2p1_0037F.1_g023840 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 1.9e-269 932.9 1036 52.2
Haze_14475 Corylus avellana HOM05D004116 ORTHO05D004734 3.3e-269 932.2 1047 52.0
PGR004G0109 Punica granatum HOM05D004116 ORTHO05D004734 3.3e-269 932.2 1034 52.1
Lsat_1_v5_gn_4_170201 Lactuca sativa HOM05D004116 ORTHO05D004734 4.3e-269 931.8 1013 53.3
Manes.01G099400 Manihot esculenta HOM05D004116 ORTHO05D004734 4.3e-269 931.8 1029 53.3
Sopen02g033270 Solanum pennellii HOM05D004116 ORTHO05D004734 5.6e-269 931.4 1040 51.9
HanXRQChr15g0488441 Helianthus annuus HOM05D004116 ORTHO05D004734 9.5e-269 930.6 999 53.2
Atru.chr8.371 Acer truncatum HOM05D004116 ORTHO05D004734 1.2e-268 930.2 1043 52.0
Eucgr.I01989 Eucalyptus grandis HOM05D004116 ORTHO05D004734 2.8e-268 929.1 1029 51.8
CSS0030715 Camellia sinensis var. sinensis HOM05D004116 ORTHO05D004734 3.6e-268 928.7 1041 51.7
DCAR_011063 Daucus carota HOM05D004116 ORTHO05D004734 3.6e-268 928.7 1027 52.1
Aqoxy3G03559 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 4.7e-268 928.3 1029 51.2
vmacro18164 Vaccinium macrocarpon HOM05D004116 ORTHO05D004734 4.7e-268 928.3 1040 51.9
Cc07_g03830 Coffea canephora HOM05D004116 ORTHO05D004734 8.0e-268 927.5 1027 52.1
Peaxi162Scf00166g00825 Petunia axillaris HOM05D004116 ORTHO05D004734 1.8e-267 926.4 1040 51.5
ClCG10G015430 Citrullus lanatus HOM05D004116 ORTHO05D004734 8.9e-267 924.1 1040 52.0
Oeu045355.1 Olea europaea HOM05D004116 ORTHO05D004734 1.2e-266 923.7 1040 51.1
HanXRQChr09g0264141 Helianthus annuus HOM05D004116 ORTHO05D004734 2.0e-266 922.9 1030 52.3
Sp6g28690 Schrenkiella parvula HOM05D004116 ORTHO05D004734 9.8e-266 920.6 1038 51.2
MELO3C009839.2 Cucumis melo HOM05D004116 ORTHO05D004734 1.3e-265 920.2 1042 51.4
Sed0005067 Sechium edule HOM05D004116 ORTHO05D004734 2.2e-265 919.5 1033 50.9
CiPaw.03G091800 Carya illinoinensis HOM05D004116 ORTHO05D004734 4.9e-265 918.3 1044 51.2
Glyma.13G059200 Glycine max HOM05D004116 ORTHO05D004734 6.4e-265 917.9 1038 51.7
Rhsim08G0073200 Rhododendron simsii HOM05D004116 ORTHO05D004734 8.3e-265 917.5 1096 49.5
CANSAT64G2358 Cannabis sativa HOM05D004116 ORTHO05D004734 1.1e-264 917.1 1029 52.0
CsaV3_3G041070 Cucumis sativus L. HOM05D004116 ORTHO05D004734 1.4e-264 916.8 1044 51.1
Nitab4.5_0000565g0080 Nicotiana tabacum HOM05D004116 ORTHO05D004734 1.4e-264 916.8 1075 50.8
TWI34G1118 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 2.4e-264 916.0 1034 51.3
MSTRG.23904 Avicennia marina HOM05D004116 ORTHO05D004734 3.2e-264 915.6 1036 51.0
MD09G1060800 Malus domestica HOM05D004116 ORTHO05D004734 7.0e-264 914.4 1047 51.7
SGA_v2.0_scaffold413G51160 Striga asiatica HOM05D004116 ORTHO05D004734 9.2e-264 914.1 1004 51.7
Migut.H00657 Erythranthe guttata HOM05D004116 ORTHO05D004734 1.2e-263 913.7 1030 50.6
TWI60G1537 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 1.6e-263 913.3 1035 51.3
Ciclev10010958m.g Citrus clementina HOM05D004116 ORTHO05D004734 2.7e-263 912.5 1050 51.5
Nn4g23336 Nelumbo nucifera HOM05D004116 ORTHO05D004734 2.7e-263 912.5 1040 51.1
Glyma.19G027200 Glycine max HOM05D004116 ORTHO05D004734 6.0e-263 911.4 1036 51.4
Gohir.D09G011100 Gossypium hirsutum HOM05D004116 ORTHO05D004734 7.8e-263 911.0 1055 50.8
Gorai.006G012900 Gossypium raimondii HOM05D004116 ORTHO05D004734 1.0e-262 910.6 1055 50.8
Lalb_Chr21g0318471 Lupinus albus HOM05D004116 ORTHO05D004734 1.0e-262 910.6 1044 51.0
Aqoxy3G01362 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 1.3e-262 910.2 1036 50.3
Thhalv10012542m.g Eutrema salsugineum HOM05D004116 ORTHO05D004734 1.7e-262 909.8 1038 50.5
arahy.Tifrunner.gnm1.ann1.M1DWNQ Arachis hypogaea HOM05D004116 ORTHO05D004734 6.6e-262 907.9 1057 50.5
RcHm_v2.0_Chr2g0166651 Rosa chinensis HOM05D004116 ORTHO05D004734 8.6e-262 907.5 1035 50.9
Thecc.04G090300 Theobroma cacao HOM05D004116 ORTHO05D004734 8.6e-262 907.5 1047 51.3
CARHR197910 Cardamine hirsuta HOM05D004116 ORTHO05D004734 1.5e-261 906.7 1038 50.3
Ca_04866_v3 Cicer arietinum L. HOM05D004116 ORTHO05D004734 1.5e-261 906.7 1029 51.2
Carub.0006s1357 Capsella rubella HOM05D004116 ORTHO05D004734 2.5e-261 906.0 1040 50.3
THA.LOC104822346 Tarenaya hassleriana HOM05D004116 ORTHO05D004734 2.5e-261 906.0 1040 51.1
Lju41A7G39 Lonicera japonica HOM05D004116 ORTHO05D004734 3.3e-261 905.6 1052 51.1
Duzib264G1228 Durio zibethinus HOM05D004116 ORTHO05D004734 7.3e-261 904.4 1047 50.6
Phvul.004G033100 Phaseolus vulgaris HOM05D004116 ORTHO05D004734 9.5e-261 904.0 1040 51.0
SGA_v2.0_scaffold4G02415 Striga asiatica HOM05D004116 ORTHO05D004734 9.5e-261 904.0 1037 50.3
VMungo0464G1725 Vigna mungo HOM05D004116 ORTHO05D004734 2.8e-260 902.5 1040 50.9
BolC9t59011H Brassica oleracea HOM05D004116 ORTHO05D004734 4.7e-260 901.7 1040 50.2
Gohir.A09G012200 Gossypium hirsutum HOM05D004116 ORTHO05D004734 6.2e-260 901.4 1031 50.3
TPR.G26216 Trifolium pratense HOM05D004116 ORTHO05D004734 1.8e-259 899.8 1037 51.1
A10p23490 Brassica napus HOM05D004116 ORTHO05D004734 3.1e-259 899.0 1043 50.1
BraA10t44416Z Brassica rapa HOM05D004116 ORTHO05D004734 3.1e-259 899.0 1043 50.1
PGSC0003DMG400007132 Solanum tuberosum HOM05D004116 ORTHO05D004734 1.2e-258 897.1 1041 50.7
AT5G15400 Arabidopsis thaliana HOM05D004116 ORTHO05D004734 1.5e-258 896.7 1040 50.1
AL6G26260 Arabidopsis lyrata HOM05D004116 ORTHO05D004734 2.0e-258 896.3 1040 50.0
Sc10g0003320 Simmondsia chinensis HOM05D004116 ORTHO05D004734 2.6e-258 896.0 1055 50.2
Aa31LG11G14160 Aethionema arabicum HOM05D004116 ORTHO05D004734 3.4e-258 895.6 1042 50.2
Medtr6g013690 Medicago truncatula HOM05D004116 ORTHO05D004734 4.4e-258 895.2 1040 50.6
C09p61720 Brassica napus HOM05D004116 ORTHO05D004734 5.8e-258 894.8 1039 50.0
BcaC03g13414 Brassica carinata HOM05D004116 ORTHO05D004734 2.2e-257 892.9 1033 50.0
Nitab4.5_0008573g0070 Nicotiana tabacum HOM05D004116 ORTHO05D004734 2.9e-257 892.5 1079 50.1
Potri.017G089600 Populus trichocarpa HOM05D004116 ORTHO05D004734 2.9e-257 892.5 1018 51.5
Potri.004G121200 Populus trichocarpa HOM05D004116 ORTHO05D004734 6.4e-257 891.3 1019 51.7
BraA02t05272Z Brassica rapa HOM05D004116 ORTHO05D004734 1.1e-256 890.6 1037 50.1
Lj2g0025037 Lotus japonicus HOM05D004116 ORTHO05D004734 1.1e-256 890.6 1044 50.2
C02p07680 Brassica napus HOM05D004116 ORTHO05D004734 1.4e-256 890.2 1045 49.6
BolC2t06699H Brassica oleracea HOM05D004116 ORTHO05D004734 1.4e-256 890.2 1045 49.6
A02p03010 Brassica napus HOM05D004116 ORTHO05D004734 1.9e-256 889.8 1041 50.0
Duzib147G0424 Durio zibethinus HOM05D004116 ORTHO05D004734 2.4e-256 889.4 1047 49.5
FAN09G3106 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.4e-256 889.4 1032 50.5
FAN14G3940 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.4e-256 889.4 1030 50.6
Sopen06g031210 Solanum pennellii HOM05D004116 ORTHO05D004734 2.4e-256 889.4 1030 50.3
FvH4_6g47550 Fragaria vesca HOM05D004116 ORTHO05D004734 3.2e-256 889.0 1030 50.6
Cfa007620 Carpinus fangiana HOM05D004116 ORTHO05D004734 1.7e-254 883.2 1041 50.5
COL.COLO4_07430 Corchorus olitorius HOM05D004116 ORTHO05D004734 5.6e-253 878.2 1037 50.7
FAN02G1010 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.2e-250 870.5 1074 48.8
FAN05G0837 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.5e-250 870.2 1072 48.7
MBI19_g32361_MAGBIO Magnolia biondii HOM05D004116 ORTHO05D004734 2.0e-250 869.8 1053 48.8
Sabra17G0078900 Salix brachista HOM05D004116 ORTHO05D004734 4.9e-249 865.1 1035 49.7
RcHm_v2.0_Chr5g0047221 Rosa chinensis HOM05D004116 ORTHO05D004734 1.6e-247 860.1 983 51.1
EL10Ac2g03047 Beta vulgaris HOM05D004116 ORTHO05D004734 2.7e-247 859.4 1143 46.6
arahy.Tifrunner.gnm1.ann1.JWLU7F Arachis hypogaea HOM05D004116 ORTHO05D004734 4.6e-247 858.6 1046 49.0
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.5e-242 843.6 885 54.1
HPP92_023626 Vanilla planifolia HOM05D004116 ORTHO05D004734 2.9e-233 812.8 972 48.4
Os03g0427900 Oryza sativa ssp. japonica HOM05D004116 ORTHO05D004734 1.4e-232 810.4 1030 47.3
Solyc06g074770.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 5.6e-229 798.5 972 49.0
AUR62018140 Chenopodium quinoa HOM05D004116 ORTHO05D004734 1.9e-224 783.5 1026 46.3
SHI16441 Sapria himalayana HOM05D004116 ORTHO05D004734 6.9e-219 765.0 1020 47.1
ATR0111G012 Amborella trichopoda HOM05D004116 ORTHO05D004734 2.2e-217 760.0 837 51.5
unitig_744.g24002 Utricularia gibba HOM05D004116 ORTHO05D004734 3.8e-217 759.2 1026 46.7
Cpa.g.sc14.139 Carica papaya HOM05D004116 ORTHO05D004734 1.0e-214 751.1 1038 46.2
AUR62034478 Chenopodium quinoa HOM05D004116 ORTHO05D004734 7.4e-213 745.0 1026 45.5
Mapoly0052s0078 Marchantia polymorpha HOM05D004116 ORTHO05D004734 5.9e-202 708.8 1049 42.0
AagrBONN_evm.TU.Sc2ySwM_340.219 Anthoceros agrestis HOM05D004116 ORTHO05D004734 1.4e-198 697.6 1034 41.6
SMO356G0406 Selaginella moellendorffii HOM05D004116 ORTHO05D004734 1.0e-193 681.4 1034 39.9
Zm00001eb020370 Zea mays HOM05D004116 ORTHO05D004734 3.8e-193 679.5 720 52.4
FAN11G2920 Fragaria x ananassa HOM05D004116 ORTHO05D004734 9.4e-192 674.9 972 42.8
Pp3c15_20630 Physcomitrium patens HOM05D004116 ORTHO05D004734 1.2e-191 674.5 1046 41.9
Zm00001eb393280 Zea mays HOM05D004116 ORTHO05D004734 4.7e-191 672.5 723 51.7
Ah.12g062550 Amaranthus hybridus HOM05D004116 ORTHO05D004734 1.4e-179 634.4 729 51.3
FAN25G2854 Fragaria x ananassa HOM05D004116 ORTHO05D004734 8.0e-175 618.6 931 42.6
Hma1.2p1_0604F.1_g187770 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 5.7e-173 612.5 574 57.0
CDE04G3780 Ceratophyllum demersum HOM05D004116 ORTHO05D004734 5.0e-169 599.4 632 50.9
Aqoxy3G00661 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 3.5e-162 576.6 566 54.2
Psat1g069120 Pisum sativum HOM05D004116 ORTHO05D004734 3.2e-147 526.9 469 58.8
PSO017G4845 Papaver somniferum HOM05D004116 ORTHO05D004734 3.4e-133 480.3 1037 35.2
Solyc02g088550.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 2.2e-132 477.6 441 58.0
FvH4_3g25920 Fragaria vesca HOM05D004116 ORTHO05D004734 1.2e-130 471.9 456 54.2
CBR_g12108 Chara braunii HOM05D004116 ORTHO05D004734 1.3e-121 441.8 506 46.0
FAN16G3124 Fragaria x ananassa HOM05D004116 ORTHO05D004734 5.6e-120 436.4 498 49.4
PRCOL_00002499 Prasinoderma coloniale HOM05D004116 ORTHO05D004734 1.8e-113 414.8 1031 31.2
BcaC04g24243 Brassica carinata HOM05D004116 ORTHO05D004734 2.9e-108 397.5 371 57.4
CDE07G1255 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 2.9e-108 397.5 418 50.5
FAN17G0761 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.5e-99 367.9 388 51.5
FAN09G1300 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.8e-94 351.7 380 50.3
FAN09G4205 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.8e-94 351.7 380 50.3
PSO384G2573 Papaver somniferum HOM05D004116 ORTHO05D004734 3.8e-92 344.0 589 38.4
PSO761G0054 Papaver somniferum HOM05D004116 ORTHO05D004734 3.8e-92 344.0 600 40.2
FvH4_3g25930 Fragaria vesca HOM05D004116 ORTHO05D004734 2.7e-90 337.8 506 42.7
FAN21G0296 Fragaria x ananassa HOM05D004116 ORTHO05D004734 9.7e-88 329.3 391 48.3
SEGI_13711 Sequoiadendron giganteum HOM05D004116 ORTHO05D004734 1.4e-86 325.5 342 50.3
Aqoxy3G00662 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 2.4e-86 324.7 416 47.8
Psat1g069040 Pisum sativum HOM05D004116 ORTHO05D004734 5.3e-86 323.6 452 46.7
Cre09.g398350 Chlamydomonas reinhardtii HOM05D004116 ORTHO05D004734 1.1e-78 299.3 850 29.1
BcaNung03312 Brassica carinata HOM05D004116 ORTHO05D004734 1.3e-68 265.8 489 40.1
QL02p039616 Quercus lobata HOM05D004116 ORTHO05D004734 2.2e-60 238.4 336 42.6
Lsat_1_v5_gn_8_41201 Lactuca sativa HOM05D004116 ORTHO05D004734 2.8e-55 221.5 181 63.5
Ah.12g062560 Amaranthus hybridus HOM05D004116 ORTHO05D004734 4.5e-53 214.2 284 45.1
PSO478G4129 Papaver somniferum HOM05D004116 ORTHO05D004734 1.1e-51 209.5 405 35.8
CBR_g12111 Chara braunii HOM05D004116 ORTHO05D004734 1.8e-49 202.2 512 30.7
FAN12G4053 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.5e-48 199.1 216 50.9
FAN21G1132 Fragaria x ananassa HOM05D004116 ORTHO05D004734 5.4e-46 190.7 263 43.7
MCO05G368 Micromonas commoda HOM05D004116 ORTHO05D004734 1.7e-39 169.1 191 47.6
Lsat_1_v5_gn_8_41221 Lactuca sativa HOM05D004116 ORTHO05D004734 1.2e-37 162.9 370 34.6
Actinidia17574 Actinidia chinensis HOM05D004116 ORTHO05D004734 1.6e-37 162.5 274 39.4
Actinidia17575 Actinidia chinensis HOM05D004116 ORTHO05D004734 1.7e-36 159.1 132 59.1
Actinidia17576 Actinidia chinensis HOM05D000100 ORTHO05D004702 1.9e-35 155.6 117 68.4
FAN21G1378 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.5e-35 155.2 228 41.7
FAN16G0481 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.2e-29 136.3 219 40.6
Lsat_1_v5_gn_0_45261 Lactuca sativa HOM05D004116 ORTHO05D004734 2.7e-29 135.2 147 53.1
Oeu034757.1 Olea europaea HOM05D004116 ORTHO05D004734 6.2e-26 124.0 136 48.5
Hma1.2p1_1813F.1_g303850 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 2.3e-25 122.1 110 63.6
Psat1g069080 Pisum sativum HOM05D004116 ORTHO05D004734 1.3e-23 116.3 131 55.0
AL1G40200 Arabidopsis lyrata HOM05D004116 ORTHO05D004734 5.4e-22 110.9 79 67.1
TAR622G0429 Trochodendron aralioides HOM05D004116 ORTHO05D004734 5.1e-20 104.4 165 42.4
FAN16G0041 Fragaria x ananassa HOM05D004116 ORTHO05D004734 4.3e-19 101.3 106 57.5
CDE04G3166 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 7.3e-19 100.5 90 57.8
SalBow6G1256 Salvia bowleyana HOM05D003831 ORTHO05D004440 3.0e-12 78.6 199 29.1
Cre12.g519150 Chlamydomonas reinhardtii HOM05D004874 ORTHO05D006796 5.1e-12 77.8 72 48.6
MCO16G187 Micromonas commoda HOM05D004874 ORTHO05D006796 1.6e-10 72.8 69 50.7
PSO675G1667 Papaver somniferum HOM05D004116 ORTHO05D004734 1.3e-07 63.2 70 47.1
CAN.G111.24 Capsicum annuum HOM05D004116 ORTHO05D004734 5.4e-06 57.8 98 37.8


User provided reference genes

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