Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 5.1e-130 469.2 324 100.0
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 2.2e-125 453.8 324 95.1
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 2.8e-72 277.3 325 55.7
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 2.3e-66 257.7 325 53.8
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 7.8e-62 242.7 332 55.7
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 3.0e-61 240.7 324 66.4
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 6.6e-61 239.6 325 52.0
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.9e-60 238.0 325 49.5
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 1.6e-59 235.0 293 46.4
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 3.6e-59 233.8 293 45.7
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 4.7e-59 233.4 293 46.1
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 1.1e-58 232.3 325 55.4
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 4.0e-58 230.3 325 54.5
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 6.8e-58 229.6 293 46.8
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 1.5e-57 228.4 325 54.2
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 2.6e-57 227.6 325 54.2
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 2.6e-57 227.6 325 50.2
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 2.6e-57 227.6 293 46.4
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 3.4e-57 227.3 325 49.5
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 3.4e-57 227.3 325 50.5
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 3.4e-57 227.3 293 51.9
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 4.9e-56 223.4 299 44.1
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 8.3e-56 222.6 293 47.4
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 1.1e-55 222.2 295 44.1
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 3.2e-55 220.7 293 44.4
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 4.1e-55 220.3 335 49.3
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 4.1e-55 220.3 325 48.9
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 5.4e-55 219.9 324 48.8
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 7.1e-55 219.5 281 46.6
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 9.2e-55 219.2 293 50.5
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 9.2e-55 219.2 325 50.2
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 1.2e-54 218.8 293 43.3
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 1.2e-54 218.8 293 45.7
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 2.1e-54 218.0 293 50.5
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 2.7e-54 217.6 293 42.7
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 2.7e-54 217.6 321 49.2
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 3.5e-54 217.2 293 51.2
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 4.6e-54 216.9 299 43.1
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 4.6e-54 216.9 325 48.6
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 7.8e-54 216.1 294 44.9
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 7.8e-54 216.1 325 49.2
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 1.0e-53 215.7 293 45.1
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 1.0e-53 215.7 325 53.2
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 1.3e-53 215.3 325 47.7
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.3e-53 215.3 323 48.9
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 3.0e-53 214.2 294 44.2
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 5.1e-53 213.4 325 48.0
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 8.6e-53 212.6 325 51.7
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 8.6e-53 212.6 325 48.0
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 1.1e-52 212.2 325 46.5
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 1.1e-52 212.2 325 53.2
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 1.5e-52 211.8 293 44.4
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 3.3e-52 210.7 323 48.3
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 3.3e-52 210.7 323 47.7
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 7.3e-52 209.5 323 47.7
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 6.2e-51 206.5 293 45.4
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 8.1e-51 206.1 292 43.8
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 8.1e-51 206.1 325 50.5
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 5.2e-50 203.4 325 45.2
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 6.8e-50 203.0 293 44.4
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 2.0e-49 201.4 325 47.7
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 2.6e-49 201.1 325 54.2
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 3.4e-49 200.7 284 44.0
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 1.7e-48 198.4 325 44.9
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 2.9e-48 197.6 325 46.5
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 3.7e-48 197.2 325 44.0
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 4.9e-48 196.8 281 50.2
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 1.4e-47 195.3 295 48.5
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 2.4e-47 194.5 283 42.4
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 4.1e-47 193.7 326 42.9
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 2.1e-46 191.4 280 43.2
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 3.5e-46 190.7 293 39.2
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 1.0e-45 189.1 293 41.6
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 5.1e-45 186.8 325 44.9
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 8.6e-45 186.0 326 47.2
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 7.3e-44 183.0 279 39.8
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 9.6e-44 182.6 325 37.2
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 1.2e-43 182.2 280 45.7
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 1.6e-43 181.8 286 51.7
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 1.6e-43 181.8 346 43.4
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 2.8e-43 181.0 326 37.1
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 6.2e-43 179.9 325 36.6
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 6.2e-43 179.9 279 39.4
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 8.1e-43 179.5 326 37.1
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 8.1e-43 179.5 326 37.1
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 8.1e-43 179.5 279 40.5
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 1.1e-42 179.1 325 43.1
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 3.1e-42 177.6 325 44.6
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 3.1e-42 177.6 325 44.6
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 4.0e-42 177.2 273 42.1
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 5.2e-42 176.8 276 39.5
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 1.5e-41 175.3 325 44.3
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 2.6e-41 174.5 170 58.2
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 3.4e-41 174.1 326 36.8
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 5.8e-41 173.3 273 43.2
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 2.9e-40 171.0 328 48.5
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 6.4e-40 169.9 331 42.9
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.4e-39 168.7 273 39.6
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 4.6e-38 163.7 273 41.4
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 8.7e-37 159.5 293 35.5
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 2.8e-35 154.5 277 37.5
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 9.0e-34 149.4 295 44.1
CSS0041788 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.3e-32 145.6 196 53.6
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 3.9e-29 134.0 198 52.5
Solyc06g054440.2 Solanum lycopersicum HOM05D002762 ORTHO05D004643 5.1e-29 133.7 165 43.6
MBI19_g20289_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 9.6e-28 129.4 109 80.7
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 4.0e-26 124.0 306 31.7
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 1.2e-25 122.5 191 50.8
Solyc06g054430.1 Solanum lycopersicum HOM05D002762 ORTHO05D004643 2.2e-24 118.2 89 66.3
Lalb_Chr18g0055921 Lupinus albus HOM05D002762 ORTHO05D004643 4.2e-23 114.0 167 49.7
Glyma.15G101100 Glycine max HOM05D002762 ORTHO05D004643 1.6e-22 112.1 109 73.4
Os10g0148800 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 1.8e-21 108.6 296 30.7
HanXRQChr11g0325871 Helianthus annuus HOM05D002762 ORTHO05D004643 3.9e-21 107.5 142 41.5
Pp3c6_11940 Physcomitrium patens HOM05D002762 ORTHO05D004643 1.3e-19 102.4 290 29.3
Cpa.g.c35915 Carica papaya HOM05D002762 ORTHO05D004643 1.6e-19 102.1 92 52.2
CSS0016618 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 6.2e-19 100.1 68 66.2
CARHR222230 Cardamine hirsuta HOM05D002762 ORTHO05D004643 6.9e-18 96.7 89 53.9
HanXRQChr11g0325861 Helianthus annuus HOM05D002762 ORTHO05D004643 3.4e-17 94.4 96 49.0
CSS0038196 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.8e-16 90.9 89 51.7
Oeu042638.1 Olea europaea HOM05D002762 ORTHO05D004643 4.9e-16 90.5 148 38.5
CARHR222240 Cardamine hirsuta HOM05D002762 ORTHO05D004643 8.4e-16 89.7 142 37.3
HanXRQChr11g0325851 Helianthus annuus HOM05D002762 ORTHO05D004643 1.0e-13 82.8 75 53.3
Oeu017376.1 Olea europaea HOM05D002762 ORTHO05D004643 1.3e-13 82.4 77 50.6
Pp3c6_5440 Physcomitrium patens HOM05D002762 ORTHO05D004643 8.2e-11 73.2 91 42.9
Pp3c20_15890 Physcomitrium patens HOM05D011912 ORTHO05D014147 1.5e-09 68.9 80 41.2


User provided reference genes

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