Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 3.1e-137 491.9 264 100.0
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 7.9e-133 477.2 264 95.8
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 6.5e-111 404.4 266 82.3
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 1.5e-107 393.3 264 80.3
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.5e-102 376.7 266 78.9
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.4e-81 307.0 262 62.6
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 4.5e-80 302.0 221 69.7
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 2.9e-79 299.3 262 60.3
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 8.6e-79 297.7 240 64.6
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 1.1e-78 297.4 263 60.8
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.1e-78 297.4 238 64.3
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 2.5e-78 296.2 257 60.3
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 7.3e-78 294.7 264 57.6
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.6e-77 293.5 274 57.3
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 2.1e-77 293.1 223 65.5
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.1e-77 293.1 222 67.1
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 2.1e-77 293.1 222 67.1
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.1e-77 293.1 222 67.1
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 4.7e-77 292.0 259 60.2
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 8.0e-77 291.2 219 67.6
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 3.0e-76 289.3 220 69.1
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.0e-76 289.3 222 66.2
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 4.0e-76 288.9 220 69.1
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 6.8e-76 288.1 259 61.4
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 8.9e-76 287.7 265 58.9
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.2e-75 287.3 239 60.7
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 1.2e-75 287.3 269 57.6
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 4.4e-75 285.4 241 63.5
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 5.7e-75 285.0 264 56.8
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 7.5e-75 284.6 256 59.4
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.3e-74 283.9 245 60.0
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.9e-74 282.7 223 62.3
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 3.7e-74 282.3 263 57.0
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 4.9e-74 282.0 265 57.7
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.9e-74 282.0 234 61.1
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 6.4e-74 281.6 224 66.1
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 1.1e-73 280.8 261 58.2
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 1.1e-73 280.8 216 67.6
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 2.4e-73 279.6 239 63.2
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 3.2e-73 279.3 259 58.3
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 7.0e-73 278.1 222 64.0
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 9.2e-73 277.7 202 70.3
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 1.2e-72 277.3 259 56.4
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.2e-72 277.3 223 65.0
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 2.0e-72 276.6 224 63.4
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.6e-72 275.4 252 57.5
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 4.6e-72 275.4 224 66.1
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 5.9e-72 275.0 210 64.3
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 5.9e-72 275.0 220 65.5
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.0e-71 274.2 220 63.6
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 3.0e-71 272.7 260 56.9
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.9e-71 272.3 239 59.0
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 5.0e-71 271.9 265 54.7
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 6.6e-71 271.6 224 61.2
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 219 66.2
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 1.9e-70 270.0 216 63.9
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 1.9e-70 270.0 216 63.9
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.3e-70 269.2 222 61.7
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 3.3e-70 269.2 218 66.1
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 5.6e-70 268.5 219 65.3
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 5.6e-70 268.5 256 57.4
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 1.6e-69 266.9 215 63.3
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 2.8e-69 266.2 260 55.8
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 2.8e-69 266.2 228 61.4
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.7e-69 265.4 220 59.5
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 6.2e-69 265.0 202 67.3
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 8.0e-69 264.6 250 56.4
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 2.3e-68 263.1 217 64.1
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.3e-68 263.1 220 59.1
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 5.2e-68 261.9 220 61.4
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.2e-67 260.8 213 62.0
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 2.6e-67 259.6 259 54.1
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 2.6e-67 259.6 223 61.0
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 7.5e-67 258.1 258 53.9
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 7.5e-67 258.1 237 58.2
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 9.8e-67 257.7 221 59.3
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.3e-66 257.3 225 59.1
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 2.9e-66 256.1 261 56.3
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 3.7e-66 255.8 180 70.6
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.4e-66 255.0 258 53.5
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.9e-65 253.4 221 61.5
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 1.9e-65 253.4 223 58.7
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 7.0e-65 251.5 217 58.1
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 7.0e-65 251.5 253 51.8
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 7.0e-65 251.5 221 58.4
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 7.0e-65 251.5 222 58.1
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 3.5e-64 249.2 255 49.8
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 4.6e-64 248.8 264 53.0
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 6.0e-64 248.4 218 58.7
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 7.8e-64 248.1 218 58.7
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 7.8e-64 248.1 202 62.9
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.3e-63 247.3 206 63.6
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.3e-63 247.3 218 58.7
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 2.3e-63 246.5 257 49.8
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.3e-63 246.5 218 58.3
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 3.9e-63 245.7 202 62.9
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 3.9e-63 245.7 220 59.1
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 5.0e-63 245.4 217 59.0
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.1e-62 244.2 222 57.7
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 3.3e-62 242.7 236 55.1
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 7.3e-62 241.5 166 71.1
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.3e-62 241.5 192 65.1
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.6e-61 239.2 192 65.6
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 1.4e-60 237.3 219 56.6
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 4.0e-60 235.7 217 58.1
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 9.2e-57 224.6 230 50.9
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.1e-56 223.4 221 51.6
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.0e-56 221.9 200 57.5
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.0e-55 221.1 218 53.2
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 3.0e-55 219.5 212 52.4
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.9e-54 216.9 170 64.1
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 4.3e-54 215.7 160 65.6
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 4.3e-54 215.7 167 65.3
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 2.1e-53 213.4 258 49.2
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 2.8e-53 213.0 249 51.4
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 8.1e-53 211.5 214 49.5
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 5.8e-51 205.3 169 62.1
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 9.6e-46 188.0 185 55.7
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 2.0e-43 180.3 164 54.9
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 3.2e-41 172.9 165 52.1
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 3.0e-39 166.4 114 67.5
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.8e-37 159.8 165 51.5
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 5.4e-33 145.6 244 39.8
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.6e-32 144.1 149 52.3
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 3.9e-31 139.4 123 56.1
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 2.5e-30 136.7 92 69.6
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 3.6e-29 132.9 104 64.4
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 6.9e-28 128.6 199 42.2
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 4.5e-27 125.9 91 64.8
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 6.4e-26 122.1 177 39.0
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 8.1e-21 105.1 154 44.2
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 2.9e-18 96.7 137 43.8
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 2.4e-12 77.0 45 80.0
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 1.2e-08 64.7 204 30.4
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 1.6e-08 64.3 94 43.6
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 7.9e-08 62.0 167 30.5
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 7.9e-08 62.0 167 30.5
Sc09g0007140 Simmondsia chinensis HOM05D005088 ORTHO05D389638 3.0e-07 60.1 37 70.3


User provided reference genes

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