Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G5362 Papaver somniferum HOM05D003534 ORTHO05D004911 3.2e-206 721.5 348 100.0
PSO170G1266 Papaver somniferum HOM05D034905 ORTHO05D004911 2.3e-87 326.6 424 46.2
PSO478G3774 Papaver somniferum HOM05D003534 ORTHO05D004911 7.8e-80 301.6 168 88.7
PSO170G1701 Papaver somniferum HOM05D003534 ORTHO05D004911 3.9e-63 246.1 162 76.5
PSO478G1590 Papaver somniferum HOM05D000040 ORTHO05D000267 1.8e-55 220.7 118 89.8
PSO541G3604 Papaver somniferum HOM05D003534 ORTHO05D004911 1.4e-36 157.9 170 51.2
PSO675G2831 Papaver somniferum HOM05D003534 ORTHO05D004911 1.4e-36 157.9 170 51.2
PSO675G9373 Papaver somniferum HOM05D003534 ORTHO05D004911 4.5e-35 152.9 171 50.9
Nn3g20273 Nelumbo nucifera HOM05D003534 ORTHO05D004911 5.0e-34 149.4 166 51.8
Ah.11g039060 Amaranthus hybridus HOM05D003534 ORTHO05D004911 6.5e-34 149.1 166 50.6
Aqoxy3G00729 Aquilegia oxysepala HOM05D003534 ORTHO05D004911 1.9e-33 147.5 166 50.0
AUR62041501 Chenopodium quinoa HOM05D003534 ORTHO05D004911 1.9e-33 147.5 166 49.4
PGSC0003DMG400009279 Solanum tuberosum HOM05D003534 ORTHO05D004911 2.5e-33 147.1 166 49.4
AUR62037043 Chenopodium quinoa HOM05D003534 ORTHO05D004911 3.2e-33 146.7 166 49.4
Nn8g40768 Nelumbo nucifera HOM05D003534 ORTHO05D004911 3.2e-33 146.7 166 51.2
EL10Ac2g03296 Beta vulgaris HOM05D003534 ORTHO05D004911 4.2e-33 146.4 166 48.8
AUR62038347 Chenopodium quinoa HOM05D003534 ORTHO05D004911 4.2e-33 146.4 166 48.8
Solyc11g020810.2 Solanum lycopersicum HOM05D003534 ORTHO05D004911 4.2e-33 146.4 166 50.0
Sopen11g010770 Solanum pennellii HOM05D003534 ORTHO05D004911 4.2e-33 146.4 166 50.0
Sc22g0003200 Simmondsia chinensis HOM05D003534 ORTHO05D004911 7.2e-33 145.6 166 50.6
Solyc11g020820.2 Solanum lycopersicum HOM05D003534 ORTHO05D004911 1.6e-32 144.4 166 48.8
TAR376G0939 Trochodendron aralioides HOM05D003534 ORTHO05D004911 2.7e-32 143.7 166 49.4
CAN.G259.5 Capsicum annuum HOM05D003534 ORTHO05D004911 3.6e-32 143.3 166 49.4
MBI16_g05475_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D004911 3.6e-32 143.3 166 48.2
Hund20114 Selenicereus undatus HOM05D003534 ORTHO05D004911 3.6e-32 143.3 166 48.2
HanXRQChr12g0376181 Helianthus annuus HOM05D003534 ORTHO05D004911 7.9e-32 142.1 166 47.6
Nitab4.5_0003010g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 1.0e-31 141.7 177 47.5
SEGI_39025 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 1.0e-31 141.7 166 49.4
SEGI_39659 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 1.0e-31 141.7 166 49.4
Migut.N01247 Erythranthe guttata HOM05D003534 ORTHO05D004911 1.8e-31 141.0 171 46.8
Rhsim11G0178800 Rhododendron simsii HOM05D003534 ORTHO05D004911 1.8e-31 141.0 166 48.8
Nitab4.5_0000167g0310 Nicotiana tabacum HOM05D003534 ORTHO05D004911 3.9e-31 139.8 177 46.9
Nitab4.5_0007066g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 5.1e-31 139.4 177 45.2
Nitab4.5_0000231g0480 Nicotiana tabacum HOM05D003534 ORTHO05D004911 1.1e-30 138.3 166 47.0
Dinv23505 Davidia involucrata HOM05D003534 ORTHO05D004911 1.5e-30 137.9 177 45.8
Lj4C693T2 Lonicera japonica HOM05D003534 ORTHO05D004911 1.5e-30 137.9 166 47.6
Os05g0567400 Oryza sativa ssp. japonica HOM05D003534 ORTHO05D004911 2.0e-30 137.5 173 46.8
ATR0568G003 Amborella trichopoda HOM05D003534 ORTHO05D004911 2.6e-30 137.1 166 48.2
Peaxi162Scf00391g00525 Petunia axillaris HOM05D003534 ORTHO05D004911 2.6e-30 137.1 166 48.8
CDE06G1392 Ceratophyllum demersum HOM05D003534 ORTHO05D004911 3.3e-30 136.7 166 47.0
THA.LOC104807735 Tarenaya hassleriana HOM05D003534 ORTHO05D004911 4.4e-30 136.3 166 45.2
MSTRG.27693 Avicennia marina HOM05D003534 ORTHO05D004911 5.7e-30 136.0 166 47.6
Cc02_g17370 Coffea canephora HOM05D003534 ORTHO05D004911 5.7e-30 136.0 177 44.6
CDE08G0557 Ceratophyllum demersum HOM05D003534 ORTHO05D004911 7.4e-30 135.6 166 46.4
Lsat_1_v5_gn_5_119261 Lactuca sativa HOM05D003534 ORTHO05D004911 7.4e-30 135.6 163 47.9
Nitab4.5_0006725g0010 Nicotiana tabacum HOM05D003534 ORTHO05D004911 7.4e-30 135.6 166 47.0
SalBow3G2606 Salvia bowleyana HOM05D003534 ORTHO05D004911 7.4e-30 135.6 166 47.0
Sopen11g010760 Solanum pennellii HOM05D003534 ORTHO05D004911 7.4e-30 135.6 161 47.8
CSS0034094 Camellia sinensis var. sinensis HOM05D003534 ORTHO05D004911 9.7e-30 135.2 166 47.6
SGA_v2.0_scaffold58G20518 Striga asiatica HOM05D003534 ORTHO05D004911 9.7e-30 135.2 166 46.4
THA.LOC104804130 Tarenaya hassleriana HOM05D003534 ORTHO05D004911 1.3e-29 134.8 166 45.2
Psat7g184360 Pisum sativum HOM05D003534 ORTHO05D004911 1.7e-29 134.4 177 43.5
Ca_20885_v3 Cicer arietinum L. HOM05D003534 ORTHO05D004911 2.2e-29 134.0 177 42.4
Oeu011084.1 Olea europaea HOM05D003534 ORTHO05D004911 2.2e-29 134.0 166 46.4
PSO675G8187 Papaver somniferum HOM05D003534 ORTHO05D004911 2.2e-29 134.0 151 52.3
ATR0579G045 Amborella trichopoda HOM05D003534 ORTHO05D004911 2.8e-29 133.7 166 47.0
Solyc10g046930.3 Solanum lycopersicum HOM05D003534 ORTHO05D004911 3.7e-29 133.3 181 43.1
Zm00001eb343980 Zea mays HOM05D003534 ORTHO05D004911 3.7e-29 133.3 168 45.8
Sopen10g016730 Solanum pennellii HOM05D003534 ORTHO05D004911 4.8e-29 132.9 181 42.5
Sopen10g016790 Solanum pennellii HOM05D003534 ORTHO05D004911 4.8e-29 132.9 181 42.5
PGSC0003DMG400020972 Solanum tuberosum HOM05D003534 ORTHO05D004911 6.3e-29 132.5 181 44.2
arahy.Tifrunner.gnm1.ann1.32LR34 Arachis hypogaea HOM05D003534 ORTHO05D004911 8.2e-29 132.1 177 41.8
arahy.Tifrunner.gnm1.ann1.HU7T3D Arachis hypogaea HOM05D003534 ORTHO05D004911 8.2e-29 132.1 177 41.8
Actinidia00534 Actinidia chinensis HOM05D003534 ORTHO05D004911 1.1e-28 131.7 166 47.6
Glyma.11G116800 Glycine max HOM05D003534 ORTHO05D004911 1.1e-28 131.7 177 42.4
AagrBONN_evm.TU.Sc2ySwM_228.187 Anthoceros agrestis HOM05D003534 ORTHO05D004911 1.4e-28 131.3 166 45.8
Glyma.12G042600 Glycine max HOM05D003534 ORTHO05D004911 1.4e-28 131.3 177 41.8
PGSC0003DMG400031553 Solanum tuberosum HOM05D003534 ORTHO05D004911 1.4e-28 131.3 166 44.6
Zm00001eb296160 Zea mays HOM05D003534 ORTHO05D004911 1.4e-28 131.3 168 45.2
Eucgr.I01280 Eucalyptus grandis HOM05D003534 ORTHO05D004911 1.8e-28 131.0 166 43.4
GSVIVG01023801001 Vitis vinifera HOM05D003534 ORTHO05D004911 1.8e-28 131.0 166 44.0
Medtr4g078640 Medicago truncatula HOM05D003534 ORTHO05D004911 2.4e-28 130.6 166 44.0
Prupe.8G094400 Prunus persica HOM05D003534 ORTHO05D004911 3.1e-28 130.2 177 42.9
Duzib132G0318 Durio zibethinus HOM05D003534 ORTHO05D004911 4.1e-28 129.8 177 41.8
ECA234G0458 Erigeron canadensis HOM05D003534 ORTHO05D004911 4.1e-28 129.8 166 45.2
Sed0008343 Sechium edule HOM05D003534 ORTHO05D004911 4.1e-28 129.8 166 44.6
unitig_21.g20784 Utricularia gibba HOM05D003534 ORTHO05D004911 4.1e-28 129.8 166 46.4
Aa31sc389G50 Aethionema arabicum HOM05D003534 ORTHO05D004911 6.9e-28 129.0 174 43.7
Gohir.D02G216500 Gossypium hirsutum HOM05D003534 ORTHO05D004911 6.9e-28 129.0 177 40.7
Lj3g0020150 Lotus japonicus HOM05D003534 ORTHO05D004911 6.9e-28 129.0 166 44.6
MD10G1073000 Malus domestica HOM05D003534 ORTHO05D004911 6.9e-28 129.0 177 42.4
VMungo1127G1107 Vigna mungo HOM05D003534 ORTHO05D004911 6.9e-28 129.0 177 41.2
TPR.G22546 Trifolium pratense HOM05D003534 ORTHO05D004911 9.1e-28 128.6 177 41.2
Gohir.A03G195500 Gossypium hirsutum HOM05D003534 ORTHO05D004911 1.2e-27 128.3 177 40.7
Gorai.005G244600 Gossypium raimondii HOM05D003534 ORTHO05D004911 1.2e-27 128.3 177 40.7
Thecc.02G083000 Theobroma cacao HOM05D003534 ORTHO05D004911 1.2e-27 128.3 177 42.4
MELO3C023306.2 Cucumis melo HOM05D003534 ORTHO05D004911 2.0e-27 127.5 177 41.2
MD05G1064300 Malus domestica HOM05D003534 ORTHO05D004911 2.0e-27 127.5 177 41.8
Phvul.011G044300 Phaseolus vulgaris HOM05D003534 ORTHO05D004911 2.0e-27 127.5 177 40.7
QL11p044502 Quercus lobata HOM05D003534 ORTHO05D004911 2.0e-27 127.5 166 43.4
Thhalv10024417m.g Eutrema salsugineum HOM05D003534 ORTHO05D004911 2.6e-27 127.1 174 43.7
PGR142G3854 Punica granatum HOM05D003534 ORTHO05D004911 2.6e-27 127.1 166 42.8
CiPaw.05G066400 Carya illinoinensis HOM05D003534 ORTHO05D004911 3.4e-27 126.7 166 42.8
DCAR_001567 Daucus carota HOM05D003534 ORTHO05D004911 4.5e-27 126.3 200 39.5
Manes.04G089300 Manihot esculenta HOM05D003534 ORTHO05D004911 4.5e-27 126.3 166 44.0
Medtr4g070380 Medicago truncatula HOM05D003534 ORTHO05D004911 4.5e-27 126.3 165 41.8
TWI79G0037 Tripterygium wilfordii HOM05D003534 ORTHO05D004911 4.5e-27 126.3 166 42.2
CANSAT01G2206 Cannabis sativa HOM05D003534 ORTHO05D004911 5.9e-27 125.9 166 43.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 5.9e-27 125.9 163 43.6
ClCG11G004310 Citrullus lanatus HOM05D003534 ORTHO05D004911 7.7e-27 125.6 166 42.8
PSO170G1501 Papaver somniferum HOM05D034905 ORTHO05D303873 7.7e-27 125.6 126 50.8
Lalb_Chr01g0002481 Lupinus albus HOM05D003534 ORTHO05D004911 1.0e-26 125.2 177 40.1
Lalb_Chr03g0025601 Lupinus albus HOM05D003534 ORTHO05D004911 1.0e-26 125.2 177 40.1
Cpa.g.c31087 Carica papaya HOM05D003534 ORTHO05D004911 1.3e-26 124.8 177 40.1
Cpa.g.sc62.164 Carica papaya HOM05D003534 ORTHO05D004911 1.3e-26 124.8 177 40.1
A08p21010 Brassica napus HOM05D003534 ORTHO05D004911 1.7e-26 124.4 174 42.0
CsaV3_2G014840 Cucumis sativus L. HOM05D003534 ORTHO05D004911 1.7e-26 124.4 166 42.8
Sp7g23760 Schrenkiella parvula HOM05D003534 ORTHO05D004911 1.7e-26 124.4 174 42.5
BraA08t34053Z Brassica rapa HOM05D003534 ORTHO05D004911 2.2e-26 124.0 174 42.0
HPP92_017536 Vanilla planifolia HOM05D003534 ORTHO05D004911 2.2e-26 124.0 166 42.8
FvH4_2g09160 Fragaria vesca HOM05D003534 ORTHO05D004911 2.9e-26 123.6 170 42.9
Sabra09G0090700 Salix brachista HOM05D003534 ORTHO05D004911 2.9e-26 123.6 166 41.6
A03p56220 Brassica napus HOM05D003534 ORTHO05D004911 3.8e-26 123.2 174 42.0
BraA03t14692Z Brassica rapa HOM05D003534 ORTHO05D004911 3.8e-26 123.2 174 42.0
CANSAT35G1090 Cannabis sativa HOM05D003534 ORTHO05D004911 3.8e-26 123.2 166 41.0
COL.COLO4_25956 Corchorus olitorius HOM05D003534 ORTHO05D004911 3.8e-26 123.2 160 43.8
FAN15G3506 Fragaria x ananassa HOM05D003534 ORTHO05D004911 3.8e-26 123.2 170 42.9
FAN20G2815 Fragaria x ananassa HOM05D003534 ORTHO05D004911 3.8e-26 123.2 170 42.9
FAN27G1894 Fragaria x ananassa HOM05D003534 ORTHO05D004911 3.8e-26 123.2 170 42.9
BolC7t45937H Brassica oleracea HOM05D003534 ORTHO05D004911 5.0e-26 122.9 174 41.4
Cfa004983 Carpinus fangiana HOM05D003534 ORTHO05D004911 6.5e-26 122.5 166 41.6
CBR_g6403 Chara braunii HOM05D003534 ORTHO05D004911 6.5e-26 122.5 172 40.7
Potri.009G118400 Populus trichocarpa HOM05D003534 ORTHO05D004911 6.5e-26 122.5 177 39.5
C07p54510 Brassica napus HOM05D003534 ORTHO05D004911 8.5e-26 122.1 174 41.4
FAN24G0084 Fragaria x ananassa HOM05D003534 ORTHO05D004911 8.5e-26 122.1 170 42.4
Pp3c2_28180 Physcomitrium patens HOM05D003534 ORTHO05D004911 1.1e-25 121.7 179 41.3
Pp3c2_28182 Physcomitrium patens HOM05D003534 ORTHO05D004911 1.1e-25 121.7 179 41.3
SMO361G0155 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 1.1e-25 121.7 166 47.0
SMO361G0409 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 1.1e-25 121.7 166 47.0
RcHm_v2.0_Chr6g0265021 Rosa chinensis HOM05D003534 ORTHO05D004911 1.4e-25 121.3 177 41.8
SMO361G0029 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 1.4e-25 121.3 166 46.4
vmacro02092 Vaccinium macrocarpon HOM05D003534 ORTHO05D004911 1.4e-25 121.3 211 38.9
BcaC07g38209 Brassica carinata HOM05D003534 ORTHO05D004911 3.2e-25 120.2 174 42.0
BolC8t48630H Brassica oleracea HOM05D003534 ORTHO05D004911 3.2e-25 120.2 174 42.0
CAN.G616.16 Capsicum annuum HOM05D003534 ORTHO05D004911 4.2e-25 119.8 160 43.8
C08p09620 Brassica napus HOM05D003534 ORTHO05D004911 7.2e-25 119.0 174 41.4
CARHR233180 Cardamine hirsuta HOM05D003534 ORTHO05D004911 1.2e-24 118.2 171 40.4
Mapoly0151s0007 Marchantia polymorpha HOM05D003534 ORTHO05D004911 4.7e-24 116.3 171 42.7
Carub.0007s1523 Capsella rubella HOM05D003534 ORTHO05D004911 7.9e-24 115.5 166 42.2
AL6G48970 Arabidopsis lyrata HOM05D003534 ORTHO05D004911 2.3e-23 114.0 171 42.1
AT4G25730 Arabidopsis thaliana HOM05D003534 ORTHO05D004911 5.2e-23 112.8 174 40.2
AL7G27310 Arabidopsis lyrata HOM05D003534 ORTHO05D004911 1.1e-22 111.7 174 39.7
Cfa023799 Carpinus fangiana HOM05D003534 ORTHO05D004911 3.3e-22 110.2 155 41.9
Hma1.2p1_0617F.1_g190140 Hydrangea macrophylla HOM05D003534 ORTHO05D004911 1.7e-21 107.8 182 41.8
Cre12.g529500 Chlamydomonas reinhardtii HOM05D003534 ORTHO05D004911 2.8e-21 107.1 181 37.0
PRCOL_00001513 Prasinoderma coloniale HOM05D003534 ORTHO05D004911 6.3e-21 105.9 171 37.4
Oeu029149.3 Olea europaea HOM05D003534 ORTHO05D004911 3.1e-20 103.6 187 38.0
SMO361G0680 Selaginella moellendorffii HOM05D003534 ORTHO05D004911 4.1e-20 103.2 151 46.4
Ciclev10027844m.g Citrus clementina HOM05D003534 ORTHO05D004911 4.5e-19 99.8 166 38.0
BcaB05g23691 Brassica carinata HOM05D003534 ORTHO05D004911 3.2e-17 93.6 155 40.0
Peaxi162Scf00314g00224 Petunia axillaris HOM05D003534 ORTHO05D004911 4.2e-17 93.2 151 39.1
PSO170G2403 Papaver somniferum HOM05D034905 ORTHO05D304868 9.4e-17 92.0 94 48.9
MCO16G310 Micromonas commoda HOM05D003534 ORTHO05D004911 2.7e-16 90.5 154 36.4
SEGI_37147 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 3.0e-15 87.0 108 45.4
ClCG11G000160 Citrullus lanatus HOM05D001035 ORTHO05D001045 1.2e-14 85.1 152 34.2
CANSAT21G0339 Cannabis sativa HOM05D003534 ORTHO05D004911 1.8e-12 77.8 86 47.7
Haze_26769 Corylus avellana HOM05D003534 ORTHO05D004911 3.5e-11 73.6 155 33.5
AagrBONN_evm.TU.Sc2ySwM_228.235 Anthoceros agrestis HOM05D003534 ORTHO05D004911 4.5e-11 73.2 107 39.3
Carub.0006s3329 Capsella rubella HOM05D003534 ORTHO05D004911 5.2e-07 59.7 133 32.3


User provided reference genes

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