Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 2.1e-183 645.6 329 100.0
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 2.5e-176 622.1 329 96.4
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 6.6e-113 411.4 330 65.8
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 4.3e-112 408.7 319 68.3
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 4.3e-112 408.7 319 68.3
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 1.2e-111 407.1 323 67.8
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 1.1e-110 404.1 319 68.7
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 4.9e-108 395.2 320 64.7
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 8.4e-108 394.4 318 66.0
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 1.4e-107 393.7 322 65.8
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 9.3e-107 391.0 321 66.0
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 1.2e-106 390.6 324 63.6
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 1.6e-106 390.2 316 65.2
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 1.3e-105 387.1 326 62.6
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 1.3e-105 387.1 316 62.0
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 2.3e-105 386.3 319 64.3
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 3.9e-105 385.6 321 65.4
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 6.6e-105 384.8 321 64.5
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 8.7e-105 384.4 321 64.8
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 1.5e-104 383.6 321 64.2
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 2.5e-104 382.9 314 64.6
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 5.6e-104 381.7 317 65.3
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 7.3e-104 381.3 313 63.6
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 1.6e-103 380.2 315 65.4
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.6e-103 380.2 316 63.9
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 1.6e-103 380.2 318 62.9
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 2.1e-103 379.8 316 64.6
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 4.8e-103 378.6 313 63.6
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 4.8e-103 378.6 317 65.3
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 8.1e-103 377.9 318 65.1
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.1e-102 377.5 317 64.0
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 1.1e-102 377.5 317 64.0
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 1.4e-102 377.1 318 65.1
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 1.8e-102 376.7 358 58.7
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 2.4e-102 376.3 321 64.2
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 4.0e-102 375.6 317 62.1
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 5.3e-102 375.2 320 64.1
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 6.9e-102 374.8 317 63.7
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 9.0e-102 374.4 319 64.6
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 9.0e-102 374.4 318 62.6
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 5.8e-101 371.7 320 62.5
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 7.6e-101 371.3 316 61.4
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 1.1e-99 367.5 317 61.8
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 1.4e-99 367.1 317 64.0
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 1.9e-99 366.7 317 63.7
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 3.2e-99 365.9 317 62.8
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 5.4e-99 365.2 321 64.2
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 7.1e-99 364.8 326 60.7
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 9.3e-99 364.4 315 62.2
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 1.2e-98 364.0 317 62.8
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.1e-98 363.2 325 60.9
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.5e-98 362.5 317 61.8
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 1.3e-97 360.5 321 60.4
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.8e-97 360.1 318 61.3
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.1e-96 357.5 336 61.0
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 1.5e-96 357.1 316 59.5
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 1.5e-96 357.1 330 58.5
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 4.3e-96 355.5 316 59.5
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 9.6e-96 354.4 319 59.9
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 9.6e-96 354.4 305 61.6
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 2.1e-95 353.2 286 62.6
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.1e-94 350.9 318 61.0
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.8e-94 350.1 289 61.6
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.8e-94 350.1 289 61.9
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 1.8e-94 350.1 321 58.3
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.2e-93 347.4 289 62.3
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 4.5e-93 345.5 292 61.6
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 7.6e-93 344.7 318 60.4
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 2.9e-92 342.8 292 62.3
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 3.8e-92 342.4 289 60.6
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 4.9e-92 342.0 290 61.0
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 1.1e-91 340.9 292 60.3
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 1.1e-91 340.9 300 59.7
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 1.4e-91 340.5 292 59.9
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 2.4e-91 339.7 317 58.4
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 4.2e-91 339.0 298 59.7
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 5.5e-91 338.6 289 59.9
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 5.5e-91 338.6 315 57.8
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 9.3e-91 337.8 288 59.4
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 2.1e-90 336.7 333 56.8
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 3.5e-90 335.9 322 57.5
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 6.0e-90 335.1 316 57.3
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 1.0e-89 334.3 315 59.7
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 1.3e-89 334.0 318 57.2
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 5.1e-89 332.0 314 57.0
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 1.1e-88 330.9 315 57.1
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.5e-88 330.5 299 58.5
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 4.3e-88 328.9 306 58.5
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 1.6e-87 327.0 298 58.7
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 8.2e-87 324.7 325 53.8
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 1.8e-86 323.6 306 58.5
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 2.0e-85 320.1 335 55.2
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 7.6e-85 318.2 317 55.8
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.0e-81 307.8 270 60.0
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 1.8e-81 307.0 309 54.0
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 5.1e-81 305.4 348 50.3
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 6.7e-81 305.1 326 54.3
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 2.6e-77 293.1 349 49.3
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 4.5e-77 292.4 334 50.9
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 3.3e-72 276.2 302 51.0
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 1.4e-70 270.8 310 48.4
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 2.0e-69 266.9 251 60.2
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.6e-66 257.3 217 61.8
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 1.0e-65 254.6 232 64.7
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 9.1e-62 241.5 229 62.4
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 6.5e-60 235.3 234 58.5
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 9.4e-59 231.5 203 67.5
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 5.7e-56 222.2 337 40.9
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 7.0e-54 215.3 303 41.3
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 2.6e-53 213.4 231 57.1
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 1.3e-47 194.5 366 36.1
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 4.1e-46 189.5 145 66.2
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 1.6e-37 161.0 194 47.9
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 1.0e-33 148.3 127 63.0
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 3.5e-29 133.3 339 31.6
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 4.0e-25 119.8 80 68.8
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 4.0e-25 119.8 80 68.8
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 4.6e-21 106.3 175 45.7
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 6.0e-21 105.9 99 54.5
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 6.0e-21 105.9 290 30.0
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 1.7e-20 104.4 346 27.7
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 5.0e-20 102.8 118 48.3
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 1.2e-16 91.7 53 77.4
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 4.1e-14 83.2 90 56.7
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 9.2e-14 82.0 81 60.5
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 2.1e-13 80.9 81 59.3
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 2.1e-13 80.9 81 59.3
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 4.6e-13 79.7 51 68.6
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 7.8e-13 79.0 83 57.8
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 1.5e-11 74.7 89 47.2
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.1e-09 68.6 44 68.2


User provided reference genes

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