Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 0.0e+00 1330.5 690 100.0
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 0.0e+00 1299.3 690 94.9
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.8e-307 1058.1 697 77.5
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 6.3e-299 1030.4 701 75.3
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 1.3e-296 1022.7 698 74.2
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 3.6e-286 988.0 706 72.0
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 8.0e-286 986.9 695 73.7
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.4e-285 986.1 695 73.1
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 2.6e-284 981.9 657 73.7
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 3.7e-283 978.0 692 72.7
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 8.3e-283 976.9 701 72.5
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.7e-280 969.1 699 71.2
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 4.3e-279 964.5 700 73.6
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.2e-278 963.0 700 69.4
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.8e-278 961.8 700 71.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 6.1e-278 960.7 689 72.1
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 6.1e-278 960.7 671 72.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.1e-277 958.4 656 73.3
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 2.0e-276 955.7 668 71.4
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.4e-276 954.5 698 71.8
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.3e-275 953.0 710 70.3
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 3.7e-275 951.4 700 72.0
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-274 949.9 668 71.1
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 7.0e-274 947.2 671 74.1
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 6.0e-273 944.1 706 71.0
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.0e-272 943.3 702 70.2
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.7e-272 942.6 698 70.1
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-272 942.2 695 69.4
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 2.3e-272 942.2 702 69.1
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.6e-272 940.3 695 69.6
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.5e-271 939.5 694 71.8
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 2.5e-271 938.7 703 69.0
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 9.5e-271 936.8 703 71.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 3.6e-270 934.9 700 67.0
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.6e-270 934.9 695 68.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 3.6e-270 934.9 680 69.7
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 4.0e-269 931.4 703 70.3
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 8.9e-269 930.2 703 70.6
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.2e-268 929.9 637 71.6
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 4.4e-268 927.9 693 69.4
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 7.5e-268 927.2 704 70.3
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.1e-266 921.4 697 68.7
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 5.1e-264 914.4 699 67.4
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.9e-263 912.5 698 69.5
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.5e-263 912.1 702 70.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 4.3e-263 911.4 701 69.5
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 4.3e-263 911.4 702 67.8
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 5.6e-263 911.0 702 68.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.6e-262 909.4 702 68.1
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.8e-262 908.7 690 68.3
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 3.1e-261 905.2 699 67.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.0e-261 904.8 664 70.3
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 4.0e-261 904.8 696 66.7
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.0e-260 902.5 688 69.2
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.0e-260 902.5 724 69.2
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 2.0e-260 902.5 682 67.2
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 3.4e-260 901.7 640 71.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 5.8e-260 901.0 692 69.1
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 7.5e-260 900.6 678 68.6
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 7.5e-260 900.6 680 68.5
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 7.5e-260 900.6 699 67.8
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 2.2e-259 899.0 681 68.6
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 3.7e-259 898.3 680 68.5
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 3.7e-259 898.3 680 68.4
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 3.7e-259 898.3 678 68.3
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 4.9e-259 897.9 678 68.3
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 6.4e-259 897.5 688 67.4
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 6.4e-259 897.5 679 68.2
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 8.3e-259 897.1 647 70.8
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 4.1e-258 894.8 679 68.2
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 2.1e-257 892.5 680 67.9
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.3e-256 889.8 693 66.4
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 2.8e-254 882.1 690 67.7
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 3.6e-254 881.7 692 65.6
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.0e-252 875.9 624 69.2
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 2.7e-249 865.5 689 63.4
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 4.6e-249 864.8 700 66.6
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 2.3e-248 862.4 702 66.8
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 2.5e-247 859.0 702 66.4
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.0e-244 849.4 667 66.3
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 2.2e-243 845.9 689 61.7
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.3e-240 836.6 564 69.9
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.7e-240 836.3 695 64.5
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 2.5e-239 832.4 571 75.3
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 4.8e-238 828.2 563 70.2
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 2.2e-235 819.3 573 74.5
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 6.4e-235 817.8 573 73.5
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 8.7e-232 807.4 684 62.0
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 2.8e-230 802.4 825 55.4
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.2e-226 788.5 571 68.1
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.0e-224 783.9 814 53.9
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.5e-220 770.0 699 60.4
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.9e-208 728.8 590 64.4
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 7.7e-204 714.5 620 58.9
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 3.8e-195 685.6 478 74.1
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.1e-186 657.5 802 48.1
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 6.1e-169 598.6 441 68.9
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 9.5e-146 521.5 422 61.1
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.0e-139 501.5 392 66.1
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.8e-128 464.2 561 46.3
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 7.6e-119 432.2 366 64.5
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 2.1e-116 424.1 548 45.8
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.5e-103 379.8 286 68.9
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-96 358.2 304 62.8
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-96 358.2 304 62.8
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.2e-92 345.1 305 60.3
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 2.6e-87 327.4 554 37.9
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.6e-79 301.6 277 55.6
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 2.2e-73 281.2 267 57.7
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.1e-61 242.3 569 32.0
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.4e-56 224.6 204 55.9
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 8.0e-52 209.5 271 44.6
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.9e-46 190.7 179 54.7
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 7.5e-42 176.4 159 61.6
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-30 139.0 142 55.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.7e-30 138.7 124 54.8
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 5.8e-10 70.5 204 30.4
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 6.0e-07 60.5 97 33.0


User provided reference genes

Program Settings