Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 0.0e+00 1339.7 760 100.0
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 0.0e+00 1230.3 757 94.1
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 8.0e-146 521.9 764 48.4
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 8.9e-145 518.5 764 47.4
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 7.3e-139 498.8 755 45.7
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 1.9e-123 447.6 763 44.0
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 1.6e-122 444.5 758 42.6
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 8.1e-122 442.2 758 42.9
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 4.9e-119 433.0 764 43.1
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 3.2e-118 430.3 759 42.3
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 3.2e-118 430.3 775 42.6
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 4.2e-118 429.9 762 41.3
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 3.5e-117 426.8 772 43.1
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 6.0e-117 426.0 766 42.2
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.5e-115 420.6 764 42.1
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 6.2e-114 416.0 755 41.1
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.4e-113 414.8 759 42.0
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.3e-111 408.3 759 41.6
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 1.7e-111 407.9 774 42.2
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.9e-110 404.4 756 40.7
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 5.4e-110 402.9 749 41.1
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 5.4e-110 402.9 769 40.7
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 1.6e-109 401.4 753 42.8
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 4.6e-109 399.8 775 41.4
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 8.7e-108 395.6 762 40.4
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 1.6e-106 391.3 767 40.2
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 2.1e-106 391.0 774 41.0
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 4.8e-106 389.8 769 38.4
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 4.8e-106 389.8 759 40.1
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 6.2e-106 389.4 759 38.9
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 4.0e-105 386.7 755 42.1
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 5.3e-105 386.3 764 39.8
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.9e-105 386.0 782 40.7
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 2.0e-104 384.4 753 39.4
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.4e-104 383.6 773 40.9
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 3.4e-104 383.6 754 39.4
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 7.6e-104 382.5 769 39.5
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 1.7e-103 381.3 743 39.7
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.9e-103 379.8 779 40.4
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 6.4e-103 379.4 771 39.9
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 1.9e-102 377.9 767 39.9
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.9e-102 377.9 761 39.4
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 9.3e-102 375.6 767 40.9
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.6e-101 374.8 754 39.3
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 3.5e-101 373.6 760 39.7
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.5e-101 373.6 776 40.2
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 7.9e-101 372.5 759 39.1
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 2.3e-100 370.9 588 45.1
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 3.0e-100 370.5 756 39.0
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.9e-100 370.2 781 39.8
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.9e-99 367.9 773 39.2
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 4.3e-99 366.7 769 38.6
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 5.6e-99 366.3 764 39.1
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 5.6e-99 366.3 764 39.1
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 1.6e-98 364.8 765 39.1
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 2.1e-98 364.4 759 39.5
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.7e-98 363.6 773 39.5
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 4.8e-98 363.2 769 37.5
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 2.4e-97 360.9 770 37.5
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 2.4e-97 360.9 765 39.6
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 2.4e-97 360.9 763 38.7
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 9.0e-97 359.0 762 37.9
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 1.2e-96 358.6 773 37.5
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.5e-96 358.2 762 38.5
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.5e-96 358.2 755 38.4
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 2.0e-96 357.8 760 38.7
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 2.6e-96 357.5 752 36.2
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 7.6e-96 355.9 759 38.5
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 2.9e-95 354.0 762 38.2
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 1.1e-94 352.1 761 38.1
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 2.5e-94 350.9 760 37.6
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 4.2e-94 350.1 756 38.4
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 4.2e-94 350.1 787 37.4
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 7.1e-94 349.4 578 42.6
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 1.2e-93 348.6 778 39.7
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 1.6e-93 348.2 758 38.8
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 2.7e-93 347.4 762 38.1
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 3.0e-92 344.0 759 38.2
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 3.0e-92 344.0 754 35.7
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 3.0e-92 344.0 758 38.3
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 6.7e-92 342.8 581 42.9
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 2.5e-91 340.9 756 36.5
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 3.3e-91 340.5 762 38.6
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 4.8e-90 336.7 763 35.6
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 1.1e-89 335.5 756 37.6
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 1.4e-89 335.1 757 37.9
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 1.4e-89 335.1 757 38.0
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 9.0e-89 332.4 766 37.3
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 2.0e-88 331.3 755 37.7
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 6.1e-85 319.7 767 38.1
Sed0027265 Sechium edule HOM05D001251 ORTHO05D004135 2.3e-84 317.8 765 38.0
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 5.1e-84 316.6 768 35.0
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 2.2e-82 311.2 767 35.2
Actinidia28507 Actinidia chinensis HOM05D001251 ORTHO05D004135 4.8e-82 310.1 528 42.6
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 1.4e-81 308.5 759 34.3
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 4.1e-81 307.0 783 35.5
Sed0026128 Sechium edule HOM05D001251 ORTHO05D004135 6.9e-81 306.2 764 36.1
Lj9C609G5 Lonicera japonica HOM05D001251 ORTHO05D004135 1.5e-80 305.1 776 36.2
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.7e-79 301.6 782 36.7
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 2.2e-79 301.2 759 35.7
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.2e-77 295.4 768 34.2
Aqoxy7G00001_Aqoxy7G00002 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 7.9e-77 292.7 727 33.8
ATR0661G164 Amborella trichopoda HOM05D001251 ORTHO05D004135 9.1e-73 279.3 793 33.9
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 1.5e-72 278.5 770 32.9
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 1.4e-70 271.9 774 33.6
unitig_8.g3406 Utricularia gibba HOM05D001251 ORTHO05D004135 2.6e-67 261.2 744 34.0
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 3.7e-66 257.3 758 32.6
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 2.0e-64 251.5 766 33.6
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 1.3e-63 248.8 770 33.1
Hund27142 Selenicereus undatus HOM05D001251 ORTHO05D004135 4.4e-59 233.8 640 33.8
TAR375G0588 Trochodendron aralioides HOM05D000031 ORTHO05D009544 1.3e-58 232.3 310 49.0
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 3.1e-57 227.6 555 35.9
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 7.0e-57 226.5 755 35.2
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 1.0e-55 222.6 506 40.1
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 1.9e-54 218.4 766 31.9
unitig_22.g6823 Utricularia gibba HOM05D001251 ORTHO05D004135 2.5e-54 218.0 729 32.0
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 6.1e-53 213.4 751 31.4
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 8.0e-53 213.0 756 30.3
CDE04G0747 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 3.0e-52 211.1 753 31.6
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 8.8e-52 209.5 769 31.7
Zm00001eb172450 Zea mays HOM05D001251 ORTHO05D004135 3.4e-51 207.6 750 32.5
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.4e-51 207.2 759 34.4
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 3.7e-50 204.1 757 31.7
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 5.4e-49 200.3 760 33.2
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 1.6e-48 198.7 760 31.1
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 5.9e-48 196.8 764 30.8
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 3.8e-47 194.1 777 30.5
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 5.0e-47 193.7 761 30.5
unitig_578.g16510 Utricularia gibba HOM05D001251 ORTHO05D004135 5.0e-47 193.7 627 32.4
BcaB03g13553 Brassica carinata HOM05D001071 ORTHO05D004135 9.5e-46 189.5 738 30.2
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 1.6e-45 188.7 754 29.4
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 3.0e-44 184.5 758 30.3
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 1.2e-43 182.6 757 29.1
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 4.9e-42 177.2 757 29.3
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 8.3e-42 176.4 752 29.3
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 3.8e-39 167.5 756 30.3
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 9.5e-38 162.9 759 28.1
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 3.7e-34 151.0 756 28.8
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 6.4e-34 150.2 766 27.8
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 2.4e-33 148.3 765 27.8
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 6.0e-32 143.7 764 28.3
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 7.8e-32 143.3 807 26.5
C04p01110 Brassica napus HOM05D001071 ORTHO05D004135 1.9e-30 138.7 747 27.0
GSVIVG01027456001 Vitis vinifera HOM05D001251 ORTHO05D004135 2.5e-30 138.3 143 54.5
HPP92_002735 Vanilla planifolia HOM05D001251 ORTHO05D004135 7.3e-30 136.7 764 26.7
BolC4t21764H Brassica oleracea HOM05D001071 ORTHO05D004135 8.0e-29 133.3 748 27.8
Psat0s580g0080 Pisum sativum HOM05D001251 ORTHO05D004135 4.0e-28 131.0 170 48.2
BolC7t40758H Brassica oleracea HOM05D001251 ORTHO05D004135 5.2e-28 130.6 758 26.9
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 1.5e-27 129.0 758 28.4
C03p00110 Brassica napus HOM05D001251 ORTHO05D004135 4.4e-27 127.5 756 28.0
BraA08t35670Z Brassica rapa HOM05D001251 ORTHO05D004135 4.4e-27 127.5 758 27.6
A05p00970 Brassica napus HOM05D001071 ORTHO05D004135 9.8e-27 126.3 749 26.4
BcaB01g06139 Brassica carinata HOM05D001251 ORTHO05D004135 1.7e-26 125.6 463 31.3
BolC3t12576H Brassica oleracea HOM05D001251 ORTHO05D004135 1.7e-26 125.6 463 31.3
BraA05t19097Z Brassica rapa HOM05D001071 ORTHO05D004135 2.9e-26 124.8 749 26.3
Dinv32651 Davidia involucrata HOM05D001251 ORTHO05D004135 8.6e-23 113.2 149 45.6
TAR375G0744 Trochodendron aralioides HOM05D001251 ORTHO05D004135 8.6e-23 113.2 144 46.5
A08p37730 Brassica napus HOM05D001251 ORTHO05D004135 2.5e-22 111.7 731 27.2
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 5.2e-20 104.0 751 24.0
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 6.8e-20 103.6 240 35.4
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 2.6e-19 101.7 476 27.5
CDE12G0822 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 5.8e-19 100.5 355 31.8
Oeu032681.1 Olea europaea HOM05D001251 ORTHO05D004135 1.4e-17 95.9 192 35.4
SEGI_18839 Sequoiadendron giganteum HOM05D001251 ORTHO05D004135 9.2e-17 93.2 931 24.4
C07p03620 Brassica napus HOM05D001251 ORTHO05D004135 3.5e-16 91.3 733 25.1
BcaC02g12626 Brassica carinata HOM05D001251 ORTHO05D004135 8.6e-15 86.7 534 27.9
Aqoxy7G03772 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 3.3e-14 84.7 262 29.0
C08p00060 Brassica napus HOM05D001251 ORTHO05D004135 4.7e-13 80.9 157 38.2
BcaC06g36494 Brassica carinata HOM05D001251 ORTHO05D004135 6.2e-13 80.5 245 31.0
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.2e-13 80.5 97 47.4
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.2e-13 80.5 97 47.4
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.2e-13 80.5 97 47.4
Oeu053268.1 Olea europaea HOM05D001251 ORTHO05D004135 3.1e-12 78.2 71 60.6
BcaC06g36496 Brassica carinata HOM05D001251 ORTHO05D004135 4.0e-12 77.8 285 30.5
VMungo1383G3693 Vigna mungo HOM05D001251 ORTHO05D004135 1.5e-11 75.9 163 36.8
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.0e-11 75.5 97 45.4
BcaC07g37015 Brassica carinata HOM05D001251 ORTHO05D004135 3.4e-11 74.7 383 26.4
BcaC06g36495 Brassica carinata HOM05D001251 ORTHO05D004135 5.8e-11 73.9 416 26.9
HPP92_020743 Vanilla planifolia HOM05D001251 ORTHO05D004135 1.7e-10 72.4 522 25.5
Prupe.2G200300 Prunus persica HOM05D001251 ORTHO05D004135 3.8e-10 71.2 107 47.7
HPP92_020838 Vanilla planifolia HOM05D001251 ORTHO05D004135 8.4e-10 70.1 335 27.5
C07p03630 Brassica napus HOM05D001251 ORTHO05D004135 2.4e-09 68.6 354 27.4
Atru.chr5.787 Acer truncatum HOM05D001251 ORTHO05D000619 1.6e-08 65.9 58 60.3
BcaC02g12627 Brassica carinata HOM05D001071 ORTHO05D000932 2.3e-07 62.0 142 31.7
BolC8t46805H Brassica oleracea HOM05D001251 ORTHO05D004135 3.9e-07 61.2 255 29.4
FAN15G2528 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.3e-06 58.2 84 42.9


User provided reference genes

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