Gene: CSS0039199

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0039199
  • Transcript Identifier CSS0039199.1
  • Gene Type Coding gene
  • Location Chr6 : 78437222-78448297 : negative

Gene Family Information

  • ID HOM05D001251
  • #Genes/#Species 498/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0039199.1

Descriptions

  • Description PREDICTED: protein LHY-like isoform X3 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010243
ISO
PLAZA Integrative Orthologyresponse to organonitrogen compound AT2G46830
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT2G46830
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT2G46830
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G46830
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G46830
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G46830
GO:0042754
ISO
PLAZA Integrative Orthologynegative regulation of circadian rhythm AT2G46830
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT1G01060
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT2G46830
GO:0043433
ISO
PLAZA Integrative Orthologynegative regulation of DNA-binding transcription factor activity AT1G01060
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G01060
GO:0043254
ISO
PLAZA Integrative Orthologyregulation of protein-containing complex assembly AT2G46830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G46830
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G01060
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G46830
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G01060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G46830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.4 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (REVEILLE)
27.1.1 Multi-process regulation.circadian clock system.core oscillator protein (LHY/CCA1)