Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 5.6e-167 590.9 301 100.0
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 9.9e-164 580.1 301 98.0
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 7.2e-98 361.3 269 70.6
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 5.2e-96 355.1 300 63.3
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.1e-93 345.5 271 67.2
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 5.3e-93 345.1 255 66.7
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 9.1e-93 344.4 271 67.2
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 2.6e-92 342.8 262 67.9
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 5.9e-92 341.7 273 64.5
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 1.1e-90 337.4 260 66.9
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 1.1e-90 337.4 311 60.8
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 1.9e-90 336.7 296 61.8
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 5.5e-90 335.1 280 61.8
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 7.2e-90 334.7 222 74.8
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 9.4e-90 334.3 294 61.6
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 1.2e-89 334.0 267 65.9
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 1.6e-89 333.6 293 60.8
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 2.1e-89 333.2 313 59.4
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 4.7e-89 332.0 294 61.2
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 4.7e-89 332.0 293 60.4
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 4.7e-89 332.0 289 61.2
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 6.1e-89 331.6 268 65.7
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 8.0e-89 331.3 241 68.0
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 8.0e-89 331.3 239 69.9
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 8.0e-89 331.3 290 61.7
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 1.8e-88 330.1 293 61.4
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 1.8e-88 330.1 303 60.4
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 1.8e-88 330.1 235 68.9
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 1.8e-88 330.1 265 65.3
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 2.3e-88 329.7 241 68.9
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 3.0e-88 329.3 225 72.9
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 4.0e-88 328.9 293 61.1
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 4.0e-88 328.9 276 63.4
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 4.0e-88 328.9 267 65.5
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 5.2e-88 328.6 230 70.4
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 5.2e-88 328.6 241 67.2
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 5.2e-88 328.6 258 67.1
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 6.7e-88 328.2 306 59.2
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 6.7e-88 328.2 233 69.1
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 1.2e-87 327.4 296 61.1
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.2e-87 327.4 241 66.8
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 1.2e-87 327.4 273 61.5
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 1.5e-87 327.0 284 59.9
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 2.0e-87 326.6 242 66.9
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.3e-87 325.9 271 62.0
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 4.4e-87 325.5 265 62.6
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 7.5e-87 324.7 268 62.3
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 7.5e-87 324.7 265 63.8
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 7.5e-87 324.7 277 63.2
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 7.5e-87 324.7 302 59.9
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 7.5e-87 324.7 303 59.7
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 9.7e-87 324.3 281 62.3
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 1.3e-86 323.9 283 62.5
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 1.3e-86 323.9 308 58.4
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.7e-86 323.6 265 63.4
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 2.2e-86 323.2 292 62.0
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 2.2e-86 323.2 297 59.9
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 2.2e-86 323.2 254 64.6
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 2.8e-86 322.8 235 69.8
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.8e-86 322.8 261 63.6
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.8e-86 322.8 276 61.6
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 3.7e-86 322.4 307 58.6
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 3.7e-86 322.4 276 62.0
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 4.8e-86 322.0 234 70.5
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 6.3e-86 321.6 257 65.8
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 6.3e-86 321.6 297 60.9
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 8.2e-86 321.2 265 64.2
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 8.2e-86 321.2 284 59.9
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 1.4e-85 320.5 270 63.7
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 3.1e-85 319.3 229 68.6
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 9.1e-85 317.8 274 62.0
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.2e-84 317.4 279 59.9
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 1.6e-84 317.0 274 60.6
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.6e-84 317.0 258 64.7
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 2.7e-84 316.2 265 63.8
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 7.7e-84 314.7 234 67.5
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 1.0e-83 314.3 299 58.5
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 2.2e-83 313.2 227 67.4
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 2.9e-83 312.8 236 68.2
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 3.8e-83 312.4 274 60.6
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 3.8e-83 312.4 280 60.0
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 3.8e-83 312.4 295 56.6
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 1.6e-81 307.0 287 58.2
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 8.0e-81 304.7 225 66.7
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.8e-80 303.5 276 59.4
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 2.3e-80 303.1 288 59.4
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 5.2e-80 302.0 302 58.6
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 2.0e-79 300.1 290 55.2
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 3.4e-79 299.3 269 59.9
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 4.4e-79 298.9 298 56.7
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 3.7e-78 295.8 300 54.7
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 6.3e-78 295.0 301 54.8
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 4.1e-77 292.4 304 55.3
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 2.3e-75 286.6 278 57.6
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 8.6e-75 284.6 235 65.1
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 5.5e-74 282.0 216 66.7
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 2.3e-72 276.6 203 69.0
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 3.7e-70 269.2 265 57.0
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 6.3e-70 268.5 278 55.8
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 6.3e-70 268.5 206 64.6
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 2.9e-67 259.6 222 59.0
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 4.3e-66 255.8 189 68.3
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 5.6e-66 255.4 233 56.2
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 9.5e-66 254.6 216 61.6
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 2.1e-65 253.4 225 60.0
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 1.0e-64 251.1 245 57.1
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 1.8e-64 250.4 215 59.1
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 3.0e-64 249.6 223 62.3
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 4.0e-64 249.2 216 61.1
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 3.4e-63 246.1 268 49.6
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.7e-62 243.8 215 57.7
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 3.2e-61 239.6 211 58.3
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 2.7e-60 236.5 232 54.3
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 3.3e-58 229.6 195 61.5
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 4.3e-58 229.2 226 55.8
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.6e-57 227.3 219 58.0
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 6.2e-57 225.3 212 52.4
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 1.2e-55 221.1 192 60.4
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 1.5e-55 220.7 273 49.5
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 9.8e-55 218.0 157 70.1
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 9.2e-45 184.9 171 58.5
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 3.9e-35 152.9 206 42.2
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 3.3e-34 149.8 214 39.3
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 8.4e-30 135.2 123 61.0
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 2.7e-28 130.2 97 67.0
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.9e-26 124.0 186 41.9
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 8.1e-25 118.6 202 32.2
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 3.3e-18 96.7 59 76.3
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 4.8e-17 92.8 55 76.4
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 4.9e-14 82.8 52 76.9
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.4e-13 81.3 82 51.2
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 3.2e-13 80.1 47 74.5
Sabra12G0002000 Salix brachista HOM05D000053 ORTHO05D000035 2.7e-12 77.0 82 53.7
Sabra12G0002700 Salix brachista HOM05D005740 ORTHO05D000035 2.3e-11 73.9 77 53.2
C01p22960 Brassica napus HOM05D017401 ORTHO05D020044 1.1e-08 65.1 36 80.6
Sabra12G0007800 Salix brachista HOM05D000053 ORTHO05D000035 1.4e-08 64.7 103 42.7
Sabra12G0002200 Salix brachista HOM05D005740 ORTHO05D007085 3.1e-08 63.5 71 52.1
Sabra12G0002900 Salix brachista HOM05D005740 ORTHO05D007085 9.0e-08 62.0 45 66.7
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 6.5e-06 55.8 50 54.0


User provided reference genes

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