Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 1.1e-173 613.2 307 100.0
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 1.8e-136 489.6 307 82.7
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 5.8e-87 325.1 284 59.9
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 1.4e-85 320.5 311 58.2
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.0e-83 314.3 284 57.7
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 3.9e-83 312.4 285 60.7
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 7.4e-82 308.1 284 58.1
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 1.1e-77 294.3 284 57.0
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 1.9e-77 293.5 284 58.1
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 5.5e-77 292.0 287 58.5
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 7.1e-77 291.6 287 56.8
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 4.6e-76 288.9 288 55.2
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 6.0e-76 288.5 285 54.4
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 1.9e-74 283.5 285 56.1
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 1.9e-74 283.5 287 55.7
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 4.3e-74 282.3 285 54.7
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 1.4e-72 277.3 286 54.2
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.4e-72 277.3 285 56.5
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 3.1e-72 276.2 284 53.2
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 4.1e-72 275.8 207 64.7
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 1.5e-71 273.9 284 55.3
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 2.0e-71 273.5 287 54.4
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 3.4e-71 272.7 288 55.9
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 4.5e-71 272.3 286 53.8
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 4.5e-71 272.3 314 51.6
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 5.9e-71 271.9 288 52.4
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 5.9e-71 271.9 288 52.4
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 1.0e-70 271.2 285 52.3
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 1.7e-70 270.4 287 51.9
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 2.2e-70 270.0 285 55.8
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 2.9e-70 269.6 284 51.8
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 1.1e-69 267.7 283 52.3
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 1.4e-69 267.3 281 51.6
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 1.9e-69 266.9 285 52.6
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 1.9e-69 266.9 283 52.7
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.2e-68 264.2 285 53.0
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 2.3e-67 260.0 284 51.8
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 5.1e-67 258.8 285 52.3
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 6.7e-67 258.5 278 52.2
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 2.5e-66 256.5 286 48.3
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 3.3e-66 256.1 284 49.6
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 3.3e-66 256.1 284 49.6
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 3.3e-66 256.1 292 52.7
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 7.4e-66 255.0 285 53.0
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 1.3e-65 254.2 287 53.7
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 1.6e-65 253.8 209 58.9
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 1.4e-64 250.8 286 49.0
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 2.4e-64 250.0 287 48.8
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 3.1e-64 249.6 284 50.4
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 9.1e-64 248.1 283 51.2
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 3.4e-63 246.1 283 49.8
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 5.9e-63 245.4 202 58.9
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 1.0e-62 244.6 304 47.0
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.0e-62 244.6 287 49.1
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 1.3e-62 244.2 290 47.6
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 2.2e-62 243.4 287 49.1
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 5.0e-62 242.3 285 47.4
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 5.0e-62 242.3 285 49.8
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 6.5e-62 241.9 283 49.1
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 1.4e-61 240.7 295 48.5
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 4.2e-61 239.2 252 54.4
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 9.4e-61 238.0 204 57.8
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 1.6e-60 237.3 285 48.1
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 1.4e-59 234.2 283 48.4
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 1.8e-59 233.8 253 51.8
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 3.9e-59 232.6 288 49.3
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 3.9e-59 232.6 285 47.4
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 3.9e-59 232.6 285 47.4
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.1e-58 231.1 282 46.8
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 1.7e-54 217.2 290 44.5
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 8.5e-54 214.9 284 44.0
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 8.5e-54 214.9 286 45.8
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 1.9e-53 213.8 284 42.6
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 2.5e-53 213.4 284 44.4
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 3.2e-53 213.0 269 45.0
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 4.2e-53 212.6 250 50.0
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 5.5e-53 212.2 283 43.1
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 7.2e-53 211.8 284 45.1
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 2.1e-52 210.3 294 41.2
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 4.7e-52 209.1 256 49.2
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 4.7e-52 209.1 258 48.4
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 7.9e-52 208.4 281 41.6
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 1.0e-51 208.0 286 45.1
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 1.4e-51 207.6 284 40.8
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 3.0e-51 206.5 284 41.9
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 3.3e-50 203.0 293 40.6
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 4.4e-50 202.6 287 43.6
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 4.4e-50 202.6 283 39.9
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 5.7e-50 202.2 284 42.6
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 2.8e-49 199.9 286 42.0
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 8.2e-49 198.4 129 69.0
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 1.1e-48 198.0 283 40.6
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 2.4e-48 196.8 290 42.1
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 9.1e-48 194.9 182 48.9
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 7.7e-47 191.8 271 41.7
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 1.9e-45 187.2 249 48.6
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 3.2e-45 186.4 205 47.8
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 4.2e-45 186.0 187 49.7
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 5.5e-45 185.7 225 46.2
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 5.5e-45 185.7 205 47.8
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 3.6e-44 183.0 225 45.8
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 5.2e-43 179.1 322 38.5
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 9.7e-42 174.9 255 40.0
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 3.7e-41 172.9 128 64.1
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 9.1e-40 168.3 194 43.8
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 3.8e-38 162.9 292 38.0
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 7.2e-37 158.7 300 39.3
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 7.2e-37 158.7 206 47.6
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 5.2e-35 152.5 284 36.6
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 1.8e-32 144.1 158 50.0
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 1.3e-30 137.9 283 35.7
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 1.2e-28 131.3 253 34.4
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 4.7e-28 129.4 178 42.7
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 8.0e-28 128.6 284 35.2
TPR.G5312 Trifolium pratense HOM05D005876 ORTHO05D007326 2.2e-25 120.6 127 48.0
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 3.7e-25 119.8 108 53.7
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 3.8e-22 109.8 203 34.5
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 6.1e-20 102.4 75 64.0
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 1.2e-18 98.2 89 58.4
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 1.8e-16 90.9 157 33.8
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 4.6e-15 86.3 70 60.0
TAR636G2555 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.6e-12 77.8 117 46.2
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 6.8e-11 72.4 179 28.5
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 7.8e-07 58.9 34 76.5
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 7.8e-07 58.9 34 76.5


User provided reference genes

Program Settings