Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 4.2e-116 421.4 218 100.0
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 6.8e-114 414.1 218 99.1
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 6.8e-98 360.9 218 83.9
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 9.8e-97 357.1 218 82.1
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 2.2e-96 355.9 218 81.7
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 3.7e-96 355.1 218 82.1
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.1e-95 353.6 218 83.0
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 1.1e-95 353.6 212 83.5
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 1.1e-95 353.6 218 81.7
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 3.2e-95 352.1 218 82.1
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 3.2e-95 352.1 217 80.6
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 2.7e-94 349.0 218 81.2
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 2.7e-94 349.0 218 80.7
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 3.5e-94 348.6 218 80.3
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 4.6e-94 348.2 218 80.7
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 6.0e-94 347.8 211 81.5
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 7.8e-94 347.4 214 81.8
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 1.3e-93 346.7 218 79.4
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 3.0e-93 345.5 218 79.8
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 3.0e-93 345.5 218 78.0
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 3.0e-93 345.5 218 78.0
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 3.9e-93 345.1 218 78.0
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 1.1e-92 343.6 218 78.0
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 1.5e-92 343.2 218 78.4
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 1.5e-92 343.2 218 78.9
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.5e-92 342.4 211 81.5
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 9.5e-92 340.5 218 77.5
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 9.5e-92 340.5 218 78.0
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 1.2e-91 340.1 218 76.6
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 1.6e-91 339.7 218 78.9
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 2.1e-91 339.3 214 79.0
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 2.8e-91 339.0 218 76.1
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.8e-91 339.0 218 77.5
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 2.8e-91 339.0 218 78.4
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 3.6e-91 338.6 218 78.0
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 4.7e-91 338.2 218 77.5
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 8.1e-91 337.4 218 78.0
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 1.1e-90 337.0 216 77.3
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.1e-90 337.0 218 77.1
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 1.1e-90 337.0 218 78.0
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 1.8e-90 336.3 218 75.7
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 1.8e-90 336.3 218 78.9
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 1.8e-90 336.3 218 77.1
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 3.1e-90 335.5 218 77.1
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 3.1e-90 335.5 214 79.0
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 3.1e-90 335.5 214 79.0
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 4.0e-90 335.1 218 78.4
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 4.0e-90 335.1 218 77.5
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 4.0e-90 335.1 218 77.1
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 6.8e-90 334.3 218 75.7
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 6.8e-90 334.3 218 75.7
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 6.8e-90 334.3 218 75.7
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 6.8e-90 334.3 218 75.7
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 6.8e-90 334.3 214 78.5
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 2.0e-89 332.8 217 76.0
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 4.4e-89 331.6 218 74.3
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 5.8e-89 331.3 218 76.1
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 7.5e-89 330.9 218 76.6
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 7.5e-89 330.9 218 76.1
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 9.8e-89 330.5 217 75.1
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 2.2e-88 329.3 218 75.7
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 2.2e-88 329.3 218 76.6
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 3.7e-88 328.6 218 73.9
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 6.4e-88 327.8 218 75.7
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 6.4e-88 327.8 211 77.3
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 6.4e-88 327.8 207 80.2
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 1.1e-87 327.0 218 76.1
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 1.4e-87 326.6 220 76.8
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.9e-87 326.2 214 77.1
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 1.9e-87 326.2 223 73.5
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 3.2e-87 325.5 213 77.0
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 7.1e-87 324.3 214 76.6
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 7.1e-87 324.3 206 78.6
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 9.2e-87 323.9 218 72.9
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 9.2e-87 323.9 212 76.9
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.1e-86 322.8 214 76.2
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.1e-86 322.8 209 78.0
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 3.5e-86 322.0 294 61.6
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 4.6e-86 321.6 207 77.8
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 6.0e-86 321.2 218 74.3
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 1.0e-85 320.5 218 72.9
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 1.1e-84 317.0 219 73.1
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 1.1e-84 317.0 219 73.1
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 1.1e-84 317.0 201 80.1
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 1.5e-84 316.6 219 73.1
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 1.5e-84 316.6 219 73.1
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 2.5e-84 315.8 219 73.1
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 2.5e-84 315.8 214 74.8
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 2.5e-84 315.8 207 76.8
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 3.3e-84 315.5 207 76.8
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 4.3e-84 315.1 221 71.9
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 4.3e-84 315.1 214 74.8
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 7.3e-84 314.3 218 71.1
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 1.2e-83 313.5 219 72.6
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.6e-83 313.2 203 76.8
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 1.6e-83 313.2 218 73.9
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 1.6e-83 313.2 212 75.5
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 2.1e-83 312.8 196 81.1
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.8e-83 312.4 202 77.2
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 2.8e-83 312.4 214 74.3
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.4e-82 310.1 218 70.2
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 2.0e-81 306.2 203 73.4
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 2.4e-79 299.3 218 67.9
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 9.2e-79 297.4 214 72.4
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 1.6e-78 296.6 277 56.7
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 2.1e-78 296.2 211 71.6
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 4.3e-76 288.5 210 69.0
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 2.4e-74 282.7 216 62.5
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 4.4e-73 278.5 185 74.1
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 1.3e-72 276.9 185 76.8
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 8.4e-72 274.2 201 72.1
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 2.7e-70 269.2 174 78.2
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 4.6e-70 268.5 210 63.3
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 2.8e-67 259.2 164 75.6
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 6.9e-66 254.6 173 72.3
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 1.2e-65 253.8 210 62.9
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 5.6e-60 235.0 145 84.1
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 2.8e-59 232.6 218 61.5
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 2.9e-56 222.6 212 59.4
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 5.1e-53 211.8 139 74.1
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 9.6e-52 207.6 145 74.5
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 1.4e-50 203.8 176 65.3
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 5.5e-47 191.8 214 52.3
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 3.9e-45 185.7 147 69.4
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 1.5e-44 183.7 162 57.4
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 2.5e-44 183.0 173 58.4
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 4.8e-43 178.7 110 77.3
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 4.1e-42 175.6 119 77.3
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 1.0e-37 161.0 214 48.6
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 4.6e-30 135.6 84 85.7
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 7.9e-30 134.8 91 79.1
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 9.4e-23 111.3 81 74.1
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 6.5e-16 88.6 56 75.0
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 1.9e-15 87.0 46 82.6
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 2.7e-14 83.2 53 66.0
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 8.0e-14 81.6 48 75.0
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 2.0e-12 77.0 66 66.7
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 3.3e-12 76.3 88 48.9
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 2.7e-06 56.6 34 73.5
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 8.0e-06 55.1 34 73.5


User provided reference genes

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